EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000019386 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 53625 bases
Position: chrGeneScaffold_3538:584-54208
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020854	CPSF_A	PF03178.15	8.2e-58	1	2
ENSGMOP00000020854	CPSF_A	PF03178.15	8.2e-58	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021363	-	2883	-	ENSGMOP00000020854	961 (aa)	-	UPI00023F4871

Gene Model

Click here to download ENSGMOG00000019386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019386	ddb1	94	94.649	ENSG00000167986	DDB1	82	94.649	Homo_sapiens
ENSGMOG00000019386	ddb1	94	98.662	ENSAPOG00000005036	ddb1	79	98.662	Acanthochromis_polyacanthus
ENSGMOG00000019386	ddb1	94	94.649	ENSAMEG00000016518	DDB1	79	94.649	Ailuropoda_melanoleuca
ENSGMOG00000019386	ddb1	80	98.328	ENSACIG00000020624	ddb1	79	98.328	Amphilophus_citrinellus
ENSGMOG00000019386	ddb1	94	98.328	ENSAOCG00000003066	ddb1	79	98.328	Amphiprion_ocellaris
ENSGMOG00000019386	ddb1	94	98.662	ENSAPEG00000000092	ddb1	83	98.662	Amphiprion_percula
ENSGMOG00000019386	ddb1	94	98.662	ENSATEG00000020571	ddb1	81	98.662	Anabas_testudineus
ENSGMOG00000019386	ddb1	94	94.649	ENSAPLG00000007174	DDB1	79	94.649	Anas_platyrhynchos
ENSGMOG00000019386	ddb1	94	94.314	ENSACAG00000017758	DDB1	79	94.314	Anolis_carolinensis
ENSGMOG00000019386	ddb1	94	94.649	ENSANAG00000021878	DDB1	79	94.649	Aotus_nancymaae
ENSGMOG00000019386	ddb1	94	98.662	ENSACLG00000012401	ddb1	81	98.662	Astatotilapia_calliptera
ENSGMOG00000019386	ddb1	94	94.649	ENSBTAG00000021569	DDB1	74	94.649	Bos_taurus
ENSGMOG00000019386	ddb1	90	44.170	WBGene00010890	ddb-1	77	44.170	Caenorhabditis_elegans
ENSGMOG00000019386	ddb1	94	94.649	ENSCJAG00000019319	DDB1	79	94.649	Callithrix_jacchus
ENSGMOG00000019386	ddb1	94	94.649	ENSCAFG00000016264	DDB1	83	94.649	Canis_familiaris
ENSGMOG00000019386	ddb1	94	94.649	ENSCAFG00020012722	DDB1	83	94.649	Canis_lupus_dingo
ENSGMOG00000019386	ddb1	94	94.649	ENSCHIG00000014969	DDB1	79	94.649	Capra_hircus
ENSGMOG00000019386	ddb1	94	94.314	ENSTSYG00000008027	DDB1	79	94.314	Carlito_syrichta
ENSGMOG00000019386	ddb1	94	94.314	ENSCAPG00000010786	DDB1	80	94.314	Cavia_aperea
ENSGMOG00000019386	ddb1	94	94.314	ENSCPOG00000009956	DDB1	79	94.314	Cavia_porcellus
ENSGMOG00000019386	ddb1	94	94.649	ENSCCAG00000035883	DDB1	79	94.649	Cebus_capucinus
ENSGMOG00000019386	ddb1	93	94.483	ENSCATG00000044495	DDB1	77	94.483	Cercocebus_atys
ENSGMOG00000019386	ddb1	94	94.314	ENSCLAG00000004126	DDB1	79	94.314	Chinchilla_lanigera
ENSGMOG00000019386	ddb1	94	94.649	ENSCSAG00000006392	DDB1	79	94.649	Chlorocebus_sabaeus
ENSGMOG00000019386	ddb1	78	91.340	ENSCHOG00000011377	DDB1	67	91.340	Choloepus_hoffmanni
ENSGMOG00000019386	ddb1	94	94.649	ENSCPBG00000017728	DDB1	79	94.649	Chrysemys_picta_bellii
ENSGMOG00000019386	ddb1	94	66.555	ENSCING00000007437	-	79	66.555	Ciona_intestinalis
ENSGMOG00000019386	ddb1	94	67.550	ENSCSAVG00000004783	-	88	67.550	Ciona_savignyi
ENSGMOG00000019386	ddb1	94	94.649	ENSCANG00000019948	DDB1	79	94.649	Colobus_angolensis_palliatus
ENSGMOG00000019386	ddb1	94	94.649	ENSCGRG00001016599	Ddb1	79	94.649	Cricetulus_griseus_chok1gshd
ENSGMOG00000019386	ddb1	94	94.649	ENSCGRG00000013427	Ddb1	79	94.649	Cricetulus_griseus_crigri
ENSGMOG00000019386	ddb1	93	98.662	ENSCSEG00000012499	ddb1	78	98.662	Cynoglossus_semilaevis
ENSGMOG00000019386	ddb1	94	97.993	ENSCVAG00000019531	ddb1	83	97.993	Cyprinodon_variegatus
ENSGMOG00000019386	ddb1	94	98.328	ENSDARG00000074431	ddb1	79	98.328	Danio_rerio
ENSGMOG00000019386	ddb1	94	94.649	ENSDNOG00000014884	DDB1	81	94.649	Dasypus_novemcinctus
ENSGMOG00000019386	ddb1	74	93.694	ENSDORG00000000127	Ddb1	75	93.694	Dipodomys_ordii
ENSGMOG00000019386	ddb1	94	61.538	FBgn0260962	pic	79	61.538	Drosophila_melanogaster
ENSGMOG00000019386	ddb1	75	90.301	ENSEBUG00000014593	ddb1	78	90.301	Eptatretus_burgeri
ENSGMOG00000019386	ddb1	94	94.649	ENSEASG00005008184	DDB1	79	94.649	Equus_asinus_asinus
ENSGMOG00000019386	ddb1	94	94.649	ENSECAG00000012136	DDB1	79	94.649	Equus_caballus
ENSGMOG00000019386	ddb1	89	80.135	ENSEEUG00000003194	DDB1	75	80.135	Erinaceus_europaeus
ENSGMOG00000019386	ddb1	94	98.328	ENSELUG00000023868	ddb1	79	98.328	Esox_lucius
ENSGMOG00000019386	ddb1	94	94.649	ENSFCAG00000029716	DDB1	79	94.649	Felis_catus
ENSGMOG00000019386	ddb1	94	94.649	ENSFALG00000011981	DDB1	79	94.649	Ficedula_albicollis
ENSGMOG00000019386	ddb1	94	94.983	ENSFDAG00000005128	DDB1	79	94.983	Fukomys_damarensis
ENSGMOG00000019386	ddb1	82	97.659	ENSFHEG00000022133	ddb1	77	97.659	Fundulus_heteroclitus
ENSGMOG00000019386	ddb1	94	94.649	ENSGALG00000042333	DDB1	79	94.649	Gallus_gallus
ENSGMOG00000019386	ddb1	94	98.328	ENSGAFG00000013142	ddb1	83	98.328	Gambusia_affinis
ENSGMOG00000019386	ddb1	94	98.662	ENSGACG00000017182	ddb1	82	98.662	Gasterosteus_aculeatus
ENSGMOG00000019386	ddb1	94	94.649	ENSGAGG00000014124	DDB1	83	94.649	Gopherus_agassizii
ENSGMOG00000019386	ddb1	94	94.649	ENSGGOG00000004052	DDB1	79	94.649	Gorilla_gorilla
ENSGMOG00000019386	ddb1	94	98.662	ENSHBUG00000008873	ddb1	83	98.662	Haplochromis_burtoni
ENSGMOG00000019386	ddb1	94	94.649	ENSHGLG00000018430	DDB1	79	94.649	Heterocephalus_glaber_female
ENSGMOG00000019386	ddb1	94	94.649	ENSHGLG00100014475	DDB1	79	94.649	Heterocephalus_glaber_male
ENSGMOG00000019386	ddb1	94	97.659	ENSHCOG00000018670	ddb1	82	97.659	Hippocampus_comes
ENSGMOG00000019386	ddb1	94	96.656	ENSIPUG00000005612	DDB1	82	96.656	Ictalurus_punctatus
ENSGMOG00000019386	ddb1	94	94.649	ENSSTOG00000007552	DDB1	79	94.649	Ictidomys_tridecemlineatus
ENSGMOG00000019386	ddb1	94	94.649	ENSJJAG00000017769	Ddb1	79	94.649	Jaculus_jaculus
ENSGMOG00000019386	ddb1	94	97.659	ENSKMAG00000002315	ddb1	84	97.659	Kryptolebias_marmoratus
ENSGMOG00000019386	ddb1	80	97.993	ENSLBEG00000017065	ddb1	80	97.993	Labrus_bergylta
ENSGMOG00000019386	ddb1	94	94.314	ENSLACG00000017611	DDB1	82	94.314	Latimeria_chalumnae
ENSGMOG00000019386	ddb1	82	96.316	ENSLOCG00000000012	ddb1	76	96.316	Lepisosteus_oculatus
ENSGMOG00000019386	ddb1	94	94.649	ENSLAFG00000011513	DDB1	79	94.649	Loxodonta_africana
ENSGMOG00000019386	ddb1	94	94.649	ENSMFAG00000042035	DDB1	79	94.649	Macaca_fascicularis
ENSGMOG00000019386	ddb1	94	94.649	ENSMMUG00000002691	DDB1	79	94.649	Macaca_mulatta
ENSGMOG00000019386	ddb1	94	94.649	ENSMNEG00000031559	DDB1	79	94.649	Macaca_nemestrina
ENSGMOG00000019386	ddb1	94	94.649	ENSMLEG00000044136	DDB1	80	94.483	Mandrillus_leucophaeus
ENSGMOG00000019386	ddb1	94	98.662	ENSMAMG00000014372	ddb1	79	98.662	Mastacembelus_armatus
ENSGMOG00000019386	ddb1	94	98.662	ENSMZEG00005013835	ddb1	79	98.662	Maylandia_zebra
ENSGMOG00000019386	ddb1	94	94.649	ENSMGAG00000004990	DDB1	84	94.649	Meleagris_gallopavo
ENSGMOG00000019386	ddb1	94	94.649	ENSMAUG00000012926	Ddb1	79	94.649	Mesocricetus_auratus
ENSGMOG00000019386	ddb1	94	94.649	ENSMICG00000013703	DDB1	79	94.649	Microcebus_murinus
ENSGMOG00000019386	ddb1	94	94.649	ENSMOCG00000020499	Ddb1	79	94.649	Microtus_ochrogaster
ENSGMOG00000019386	ddb1	80	98.662	ENSMMOG00000001758	ddb1	79	98.662	Mola_mola
ENSGMOG00000019386	ddb1	86	94.667	ENSMODG00000020353	DDB1	72	94.667	Monodelphis_domestica
ENSGMOG00000019386	ddb1	94	98.997	ENSMALG00000014071	ddb1	79	98.997	Monopterus_albus
ENSGMOG00000019386	ddb1	94	94.649	MGP_CAROLIEiJ_G0022695	Ddb1	79	94.649	Mus_caroli
ENSGMOG00000019386	ddb1	94	94.649	ENSMUSG00000024740	Ddb1	79	94.649	Mus_musculus
ENSGMOG00000019386	ddb1	94	94.649	MGP_PahariEiJ_G0014189	Ddb1	79	94.649	Mus_pahari
ENSGMOG00000019386	ddb1	94	94.649	MGP_SPRETEiJ_G0023609	Ddb1	79	94.649	Mus_spretus
ENSGMOG00000019386	ddb1	94	94.649	ENSMPUG00000014200	DDB1	78	94.649	Mustela_putorius_furo
ENSGMOG00000019386	ddb1	94	94.314	ENSMLUG00000013232	DDB1	79	94.314	Myotis_lucifugus
ENSGMOG00000019386	ddb1	94	94.314	ENSNGAG00000009384	Ddb1	79	94.314	Nannospalax_galili
ENSGMOG00000019386	ddb1	94	98.662	ENSNBRG00000019581	ddb1	79	98.662	Neolamprologus_brichardi
ENSGMOG00000019386	ddb1	93	90.345	ENSNLEG00000002022	DDB1	77	90.345	Nomascus_leucogenys
ENSGMOG00000019386	ddb1	84	88.294	ENSMEUG00000001099	DDB1	73	88.294	Notamacropus_eugenii
ENSGMOG00000019386	ddb1	84	94.314	ENSOPRG00000008254	DDB1	71	94.314	Ochotona_princeps
ENSGMOG00000019386	ddb1	94	94.314	ENSODEG00000002419	DDB1	79	94.314	Octodon_degus
ENSGMOG00000019386	ddb1	94	98.328	ENSONIG00000005804	ddb1	79	98.328	Oreochromis_niloticus
ENSGMOG00000019386	ddb1	94	95.318	ENSOANG00000004897	DDB1	87	95.318	Ornithorhynchus_anatinus
ENSGMOG00000019386	ddb1	94	94.649	ENSOCUG00000001667	DDB1	79	94.649	Oryctolagus_cuniculus
ENSGMOG00000019386	ddb1	94	97.659	ENSORLG00000001399	ddb1	83	97.659	Oryzias_latipes
ENSGMOG00000019386	ddb1	94	97.659	ENSORLG00020001277	ddb1	83	97.659	Oryzias_latipes_hni
ENSGMOG00000019386	ddb1	94	97.659	ENSORLG00015002080	ddb1	86	97.659	Oryzias_latipes_hsok
ENSGMOG00000019386	ddb1	94	97.993	ENSOMEG00000006181	ddb1	81	97.993	Oryzias_melastigma
ENSGMOG00000019386	ddb1	94	94.649	ENSOGAG00000016103	DDB1	79	94.649	Otolemur_garnettii
ENSGMOG00000019386	ddb1	94	94.649	ENSOARG00000011716	DDB1	78	94.649	Ovis_aries
ENSGMOG00000019386	ddb1	94	94.649	ENSPPAG00000035343	DDB1	79	94.649	Pan_paniscus
ENSGMOG00000019386	ddb1	94	94.649	ENSPPRG00000013300	DDB1	79	94.649	Panthera_pardus
ENSGMOG00000019386	ddb1	94	94.649	ENSPTIG00000006909	DDB1	79	94.649	Panthera_tigris_altaica
ENSGMOG00000019386	ddb1	94	94.649	ENSPTRG00000003737	DDB1	79	94.649	Pan_troglodytes
ENSGMOG00000019386	ddb1	94	94.649	ENSPANG00000000242	DDB1	79	94.649	Papio_anubis
ENSGMOG00000019386	ddb1	94	98.328	ENSPKIG00000019213	ddb1	79	98.328	Paramormyrops_kingsleyae
ENSGMOG00000019386	ddb1	94	94.314	ENSPSIG00000013275	DDB1	80	94.314	Pelodiscus_sinensis
ENSGMOG00000019386	ddb1	80	97.993	ENSPMGG00000021179	ddb1	79	97.993	Periophthalmus_magnuspinnatus
ENSGMOG00000019386	ddb1	94	94.649	ENSPEMG00000012241	Ddb1	79	94.649	Peromyscus_maniculatus_bairdii
ENSGMOG00000019386	ddb1	90	86.957	ENSPMAG00000008479	ddb1	85	86.957	Petromyzon_marinus
ENSGMOG00000019386	ddb1	94	94.983	ENSPCIG00000002643	DDB1	79	94.983	Phascolarctos_cinereus
ENSGMOG00000019386	ddb1	94	98.328	ENSPFOG00000002768	ddb1	79	98.328	Poecilia_formosa
ENSGMOG00000019386	ddb1	94	98.328	ENSPLAG00000017227	ddb1	82	98.328	Poecilia_latipinna
ENSGMOG00000019386	ddb1	94	98.328	ENSPMEG00000011398	ddb1	82	98.328	Poecilia_mexicana
ENSGMOG00000019386	ddb1	94	98.328	ENSPREG00000004440	ddb1	82	98.328	Poecilia_reticulata
ENSGMOG00000019386	ddb1	93	94.649	ENSPPYG00000003193	DDB1	78	94.649	Pongo_abelii
ENSGMOG00000019386	ddb1	86	82.667	ENSPCAG00000011040	DDB1	73	82.667	Procavia_capensis
ENSGMOG00000019386	ddb1	94	94.649	ENSPCOG00000015176	DDB1	79	94.649	Propithecus_coquereli
ENSGMOG00000019386	ddb1	94	93.980	ENSPVAG00000003847	DDB1	79	93.980	Pteropus_vampyrus
ENSGMOG00000019386	ddb1	51	89.095	ENSPNYG00000010482	ddb1	86	89.095	Pundamilia_nyererei
ENSGMOG00000019386	ddb1	94	97.659	ENSPNAG00000006635	ddb1	81	97.659	Pygocentrus_nattereri
ENSGMOG00000019386	ddb1	94	94.649	ENSRNOG00000020715	Ddb1	79	94.649	Rattus_norvegicus
ENSGMOG00000019386	ddb1	94	94.649	ENSRBIG00000033611	DDB1	79	94.649	Rhinopithecus_bieti
ENSGMOG00000019386	ddb1	94	94.649	ENSRROG00000041407	DDB1	79	94.649	Rhinopithecus_roxellana
ENSGMOG00000019386	ddb1	94	94.649	ENSSBOG00000019775	DDB1	79	94.649	Saimiri_boliviensis_boliviensis
ENSGMOG00000019386	ddb1	94	90.635	ENSSHAG00000011600	DDB1	84	90.635	Sarcophilus_harrisii
ENSGMOG00000019386	ddb1	94	97.993	ENSSFOG00015011151	ddb1	81	97.993	Scleropages_formosus
ENSGMOG00000019386	ddb1	94	98.328	ENSSMAG00000009495	ddb1	79	98.328	Scophthalmus_maximus
ENSGMOG00000019386	ddb1	94	98.997	ENSSDUG00000004642	ddb1	79	98.997	Seriola_dumerili
ENSGMOG00000019386	ddb1	94	98.997	ENSSLDG00000015804	ddb1	79	98.997	Seriola_lalandi_dorsalis
ENSGMOG00000019386	ddb1	62	100.000	ENSSARG00000003290	-	54	100.000	Sorex_araneus
ENSGMOG00000019386	ddb1	94	94.314	ENSSPUG00000019338	DDB1	79	94.314	Sphenodon_punctatus
ENSGMOG00000019386	ddb1	94	98.662	ENSSPAG00000009888	ddb1	83	98.662	Stegastes_partitus
ENSGMOG00000019386	ddb1	93	94.649	ENSSSCG00000013094	DDB1	79	94.649	Sus_scrofa
ENSGMOG00000019386	ddb1	93	94.983	ENSTGUG00000006414	DDB1	79	94.983	Taeniopygia_guttata
ENSGMOG00000019386	ddb1	94	97.324	ENSTRUG00000016682	ddb1	82	97.324	Takifugu_rubripes
ENSGMOG00000019386	ddb1	90	96.269	ENSTNIG00000009565	ddb1	87	96.269	Tetraodon_nigroviridis
ENSGMOG00000019386	ddb1	87	100.000	ENSTTRG00000011055	DDB1	74	100.000	Tursiops_truncatus
ENSGMOG00000019386	ddb1	94	94.649	ENSUAMG00000017793	DDB1	78	94.649	Ursus_americanus
ENSGMOG00000019386	ddb1	94	94.649	ENSUMAG00000011788	DDB1	82	94.649	Ursus_maritimus
ENSGMOG00000019386	ddb1	84	94.649	ENSVPAG00000007963	DDB1	72	94.649	Vicugna_pacos
ENSGMOG00000019386	ddb1	94	94.649	ENSVVUG00000004987	DDB1	79	94.649	Vulpes_vulpes
ENSGMOG00000019386	ddb1	94	92.308	ENSXETG00000008820	ddb1	79	92.308	Xenopus_tropicalis
ENSGMOG00000019386	ddb1	80	98.328	ENSXCOG00000013956	ddb1	79	98.328	Xiphophorus_couchianus
ENSGMOG00000019386	ddb1	94	98.328	ENSXMAG00000000022	ddb1	83	98.328	Xiphophorus_maculatus