EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000019519 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: scratch family zinc finger 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 5365 bases
Position: chrGeneScaffold_1609:75281-80645
Accession: ZDB-GENE-030131-4097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020996	zf-C2H2	PF00096.26	4.1e-26	1	4
ENSGMOP00000020996	zf-C2H2	PF00096.26	4.1e-26	2	4
ENSGMOP00000020996	zf-C2H2	PF00096.26	4.1e-26	3	4
ENSGMOP00000020996	zf-C2H2	PF00096.26	4.1e-26	4	4
ENSGMOP00000020996	zf-met	PF12874.7	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021508	-	972	-	ENSGMOP00000020996	323 (aa)	-	UPI00023F44D2

Gene Model

Click here to download ENSGMOG00000019519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000019519	scrt2	95	59.416	ENSGMOG00000000629	scrt1b	96	59.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019519	scrt2	99	79.635	ENSAPOG00000003680	scrt2	99	79.635	Acanthochromis_polyacanthus
ENSGMOG00000019519	scrt2	96	56.592	ENSAPOG00000015197	-	97	56.592	Acanthochromis_polyacanthus
ENSGMOG00000019519	scrt2	95	61.165	ENSAPOG00000009279	scrt1b	96	61.165	Acanthochromis_polyacanthus
ENSGMOG00000019519	scrt2	97	59.385	ENSACIG00000001296	-	98	59.385	Amphilophus_citrinellus
ENSGMOG00000019519	scrt2	96	56.604	ENSACIG00000006586	-	97	56.604	Amphilophus_citrinellus
ENSGMOG00000019519	scrt2	95	59.547	ENSACIG00000013613	scrt1b	96	59.547	Amphilophus_citrinellus
ENSGMOG00000019519	scrt2	99	73.556	ENSACIG00000012604	scrt2	99	73.556	Amphilophus_citrinellus
ENSGMOG00000019519	scrt2	99	79.635	ENSAOCG00000021557	scrt2	99	79.635	Amphiprion_ocellaris
ENSGMOG00000019519	scrt2	95	61.165	ENSAOCG00000003910	scrt1b	96	61.165	Amphiprion_ocellaris
ENSGMOG00000019519	scrt2	96	56.918	ENSAOCG00000023304	-	97	56.918	Amphiprion_ocellaris
ENSGMOG00000019519	scrt2	96	56.918	ENSAPEG00000005677	-	97	56.918	Amphiprion_percula
ENSGMOG00000019519	scrt2	99	79.635	ENSAPEG00000022558	scrt2	99	79.635	Amphiprion_percula
ENSGMOG00000019519	scrt2	95	61.165	ENSAPEG00000000869	scrt1b	96	61.165	Amphiprion_percula
ENSGMOG00000019519	scrt2	99	79.331	ENSATEG00000023998	scrt2	99	79.331	Anabas_testudineus
ENSGMOG00000019519	scrt2	97	59.062	ENSATEG00000003195	-	98	59.062	Anabas_testudineus
ENSGMOG00000019519	scrt2	95	61.812	ENSATEG00000002302	scrt1b	96	61.812	Anabas_testudineus
ENSGMOG00000019519	scrt2	96	57.235	ENSATEG00000011660	-	97	57.235	Anabas_testudineus
ENSGMOG00000019519	scrt2	96	56.656	ENSACLG00000012046	-	97	56.656	Astatotilapia_calliptera
ENSGMOG00000019519	scrt2	95	61.165	ENSACLG00000007162	scrt1b	96	61.165	Astatotilapia_calliptera
ENSGMOG00000019519	scrt2	96	60.194	ENSAMXG00000038085	scrt1a	97	60.518	Astyanax_mexicanus
ENSGMOG00000019519	scrt2	96	60.000	ENSAMXG00000042624	SCRT1	98	60.000	Astyanax_mexicanus
ENSGMOG00000019519	scrt2	91	68.942	ENSAMXG00000034158	scrt2	96	68.942	Astyanax_mexicanus
ENSGMOG00000019519	scrt2	87	53.497	ENSCPBG00000027613	SCRT2	100	53.846	Chrysemys_picta_bellii
ENSGMOG00000019519	scrt2	96	60.323	ENSCPBG00000018899	SCRT1	97	60.323	Chrysemys_picta_bellii
ENSGMOG00000019519	scrt2	96	55.031	ENSCSEG00000014892	-	97	55.031	Cynoglossus_semilaevis
ENSGMOG00000019519	scrt2	95	60.518	ENSCSEG00000008596	scrt1b	96	60.518	Cynoglossus_semilaevis
ENSGMOG00000019519	scrt2	99	78.328	ENSCSEG00000021542	scrt2	99	78.328	Cynoglossus_semilaevis
ENSGMOG00000019519	scrt2	96	57.547	ENSCVAG00000003190	-	97	57.547	Cyprinodon_variegatus
ENSGMOG00000019519	scrt2	95	61.165	ENSCVAG00000009561	scrt1b	96	61.165	Cyprinodon_variegatus
ENSGMOG00000019519	scrt2	99	78.723	ENSCVAG00000021038	scrt2	99	78.723	Cyprinodon_variegatus
ENSGMOG00000019519	scrt2	96	60.194	ENSDARG00000100821	scrt1a	97	60.194	Danio_rerio
ENSGMOG00000019519	scrt2	96	60.841	ENSDARG00000040214	scrt1b	97	60.841	Danio_rerio
ENSGMOG00000019519	scrt2	99	60.188	ENSELUG00000005435	scrt1b	100	60.188	Esox_lucius
ENSGMOG00000019519	scrt2	99	78.182	ENSELUG00000023883	scrt2	99	79.091	Esox_lucius
ENSGMOG00000019519	scrt2	95	61.688	ENSELUG00000022228	scrt1a	96	61.688	Esox_lucius
ENSGMOG00000019519	scrt2	71	87.755	ENSFDAG00000008733	SCRT1	98	87.755	Fukomys_damarensis
ENSGMOG00000019519	scrt2	99	73.252	ENSFHEG00000005732	scrt2	99	73.252	Fundulus_heteroclitus
ENSGMOG00000019519	scrt2	95	60.841	ENSFHEG00000014820	scrt1b	96	60.841	Fundulus_heteroclitus
ENSGMOG00000019519	scrt2	96	56.604	ENSFHEG00000009794	-	97	56.604	Fundulus_heteroclitus
ENSGMOG00000019519	scrt2	96	54.341	ENSGALG00000028912	SCRT2	97	56.270	Gallus_gallus
ENSGMOG00000019519	scrt2	96	55.305	ENSGAFG00000009650	-	97	55.305	Gambusia_affinis
ENSGMOG00000019519	scrt2	95	61.165	ENSGAFG00000007636	scrt1b	96	61.165	Gambusia_affinis
ENSGMOG00000019519	scrt2	99	73.252	ENSGAFG00000003093	scrt2	99	73.252	Gambusia_affinis
ENSGMOG00000019519	scrt2	95	59.091	ENSGACG00000008982	scrt1b	96	59.091	Gasterosteus_aculeatus
ENSGMOG00000019519	scrt2	96	55.205	ENSGACG00000004072	-	97	55.205	Gasterosteus_aculeatus
ENSGMOG00000019519	scrt2	96	54.403	ENSGAGG00000020761	SCRT2	97	56.634	Gopherus_agassizii
ENSGMOG00000019519	scrt2	96	59.677	ENSGAGG00000011736	SCRT1	98	59.677	Gopherus_agassizii
ENSGMOG00000019519	scrt2	96	56.740	ENSHBUG00000019101	-	97	56.740	Haplochromis_burtoni
ENSGMOG00000019519	scrt2	95	61.165	ENSHBUG00000016621	scrt1b	96	61.165	Haplochromis_burtoni
ENSGMOG00000019519	scrt2	99	78.723	ENSHBUG00000012492	scrt2	99	78.723	Haplochromis_burtoni
ENSGMOG00000019519	scrt2	98	54.375	ENSHCOG00000016179	-	97	55.627	Hippocampus_comes
ENSGMOG00000019519	scrt2	95	61.165	ENSHCOG00000016704	scrt1b	96	61.165	Hippocampus_comes
ENSGMOG00000019519	scrt2	99	70.517	ENSHCOG00000008116	scrt2	99	70.517	Hippocampus_comes
ENSGMOG00000019519	scrt2	96	60.772	ENSIPUG00000004551	scrt1a	97	60.772	Ictalurus_punctatus
ENSGMOG00000019519	scrt2	96	55.346	ENSIPUG00000005547	-	98	55.346	Ictalurus_punctatus
ENSGMOG00000019519	scrt2	95	61.165	ENSKMAG00000005484	scrt1b	96	61.165	Kryptolebias_marmoratus
ENSGMOG00000019519	scrt2	96	56.289	ENSKMAG00000009489	-	97	56.289	Kryptolebias_marmoratus
ENSGMOG00000019519	scrt2	99	79.027	ENSKMAG00000018087	scrt2	99	79.027	Kryptolebias_marmoratus
ENSGMOG00000019519	scrt2	99	79.939	ENSLBEG00000015419	scrt2	99	79.939	Labrus_bergylta
ENSGMOG00000019519	scrt2	96	55.346	ENSLBEG00000023388	-	97	56.289	Labrus_bergylta
ENSGMOG00000019519	scrt2	96	60.772	ENSLACG00000003588	SCRT1	96	60.772	Latimeria_chalumnae
ENSGMOG00000019519	scrt2	98	58.716	ENSLOCG00000002246	scrt2	100	58.716	Lepisosteus_oculatus
ENSGMOG00000019519	scrt2	96	63.107	ENSLOCG00000007573	scrt1b	97	63.107	Lepisosteus_oculatus
ENSGMOG00000019519	scrt2	99	79.331	ENSMAMG00000001291	scrt2	99	79.331	Mastacembelus_armatus
ENSGMOG00000019519	scrt2	95	61.165	ENSMAMG00000011698	scrt1b	96	61.165	Mastacembelus_armatus
ENSGMOG00000019519	scrt2	99	78.723	ENSMZEG00005026445	scrt2	99	78.723	Maylandia_zebra
ENSGMOG00000019519	scrt2	95	61.165	ENSMZEG00005005627	scrt1b	96	61.165	Maylandia_zebra
ENSGMOG00000019519	scrt2	96	56.740	ENSMZEG00005026702	-	97	56.740	Maylandia_zebra
ENSGMOG00000019519	scrt2	95	59.871	ENSMMOG00000003327	scrt1b	96	59.871	Mola_mola
ENSGMOG00000019519	scrt2	96	55.452	ENSMMOG00000018345	-	97	55.452	Mola_mola
ENSGMOG00000019519	scrt2	99	78.723	ENSMMOG00000009272	scrt2	99	78.723	Mola_mola
ENSGMOG00000019519	scrt2	95	61.812	ENSMALG00000012704	scrt1b	96	61.812	Monopterus_albus
ENSGMOG00000019519	scrt2	99	72.360	ENSMALG00000013656	scrt2	99	72.360	Monopterus_albus
ENSGMOG00000019519	scrt2	95	59.740	ENSNBRG00000013983	scrt1b	96	59.740	Neolamprologus_brichardi
ENSGMOG00000019519	scrt2	96	56.740	ENSNBRG00000014882	-	97	56.740	Neolamprologus_brichardi
ENSGMOG00000019519	scrt2	99	72.948	ENSNBRG00000007221	scrt2	99	72.948	Neolamprologus_brichardi
ENSGMOG00000019519	scrt2	95	61.165	ENSONIG00000006007	scrt1b	100	59.306	Oreochromis_niloticus
ENSGMOG00000019519	scrt2	99	79.027	ENSONIG00000016758	scrt2	99	79.027	Oreochromis_niloticus
ENSGMOG00000019519	scrt2	97	59.295	ENSONIG00000003152	-	98	59.295	Oreochromis_niloticus
ENSGMOG00000019519	scrt2	96	54.985	ENSONIG00000019809	-	100	54.985	Oreochromis_niloticus
ENSGMOG00000019519	scrt2	95	61.165	ENSORLG00000025651	scrt1b	96	61.165	Oryzias_latipes
ENSGMOG00000019519	scrt2	98	53.474	ENSORLG00000022825	-	100	53.474	Oryzias_latipes
ENSGMOG00000019519	scrt2	99	78.116	ENSORLG00000024051	scrt2	99	78.116	Oryzias_latipes
ENSGMOG00000019519	scrt2	95	61.165	ENSORLG00020012967	scrt1b	96	61.165	Oryzias_latipes_hni
ENSGMOG00000019519	scrt2	99	78.116	ENSORLG00020011478	scrt2	99	78.116	Oryzias_latipes_hni
ENSGMOG00000019519	scrt2	95	61.165	ENSORLG00015019165	scrt1b	96	61.165	Oryzias_latipes_hsok
ENSGMOG00000019519	scrt2	99	78.116	ENSORLG00015005524	scrt2	99	78.116	Oryzias_latipes_hsok
ENSGMOG00000019519	scrt2	96	54.037	ENSORLG00015010104	-	97	54.037	Oryzias_latipes_hsok
ENSGMOG00000019519	scrt2	95	61.165	ENSOMEG00000003925	scrt1b	96	61.165	Oryzias_melastigma
ENSGMOG00000019519	scrt2	96	55.975	ENSOMEG00000000286	-	97	55.975	Oryzias_melastigma
ENSGMOG00000019519	scrt2	99	78.723	ENSOMEG00000002661	scrt2	99	78.723	Oryzias_melastigma
ENSGMOG00000019519	scrt2	96	61.165	ENSPKIG00000020085	scrt1a	97	61.165	Paramormyrops_kingsleyae
ENSGMOG00000019519	scrt2	96	62.136	ENSPKIG00000022303	SCRT1	97	62.136	Paramormyrops_kingsleyae
ENSGMOG00000019519	scrt2	99	71.517	ENSPMGG00000016561	scrt2	99	71.517	Periophthalmus_magnuspinnatus
ENSGMOG00000019519	scrt2	95	59.091	ENSPMGG00000002260	scrt1b	96	59.091	Periophthalmus_magnuspinnatus
ENSGMOG00000019519	scrt2	96	55.556	ENSPMGG00000021402	-	97	55.556	Periophthalmus_magnuspinnatus
ENSGMOG00000019519	scrt2	99	79.027	ENSPFOG00000007738	scrt2	99	79.027	Poecilia_formosa
ENSGMOG00000019519	scrt2	96	56.604	ENSPFOG00000005616	-	97	56.604	Poecilia_formosa
ENSGMOG00000019519	scrt2	95	61.165	ENSPFOG00000017719	scrt1b	96	61.165	Poecilia_formosa
ENSGMOG00000019519	scrt2	99	73.860	ENSPLAG00000005765	scrt2	99	73.860	Poecilia_latipinna
ENSGMOG00000019519	scrt2	96	56.604	ENSPLAG00000011718	-	97	56.604	Poecilia_latipinna
ENSGMOG00000019519	scrt2	95	61.165	ENSPLAG00000009876	scrt1b	96	61.165	Poecilia_latipinna
ENSGMOG00000019519	scrt2	99	73.860	ENSPMEG00000001538	scrt2	99	73.860	Poecilia_mexicana
ENSGMOG00000019519	scrt2	96	56.604	ENSPMEG00000011706	-	97	56.604	Poecilia_mexicana
ENSGMOG00000019519	scrt2	95	61.165	ENSPMEG00000013274	scrt1b	96	61.165	Poecilia_mexicana
ENSGMOG00000019519	scrt2	99	78.116	ENSPREG00000001147	scrt2	99	78.116	Poecilia_reticulata
ENSGMOG00000019519	scrt2	95	61.165	ENSPREG00000018985	scrt1b	96	61.165	Poecilia_reticulata
ENSGMOG00000019519	scrt2	96	56.289	ENSPREG00000012166	-	97	56.289	Poecilia_reticulata
ENSGMOG00000019519	scrt2	95	61.165	ENSPNYG00000017733	scrt1b	96	61.165	Pundamilia_nyererei
ENSGMOG00000019519	scrt2	96	56.740	ENSPNYG00000008865	-	97	56.740	Pundamilia_nyererei
ENSGMOG00000019519	scrt2	99	72.644	ENSPNYG00000013109	scrt2	99	72.644	Pundamilia_nyererei
ENSGMOG00000019519	scrt2	96	60.645	ENSPNAG00000027880	-	98	60.323	Pygocentrus_nattereri
ENSGMOG00000019519	scrt2	98	60.883	ENSPNAG00000017415	scrt1a	99	60.883	Pygocentrus_nattereri
ENSGMOG00000019519	scrt2	98	60.568	ENSSFOG00015001195	SCRT1	99	60.568	Scleropages_formosus
ENSGMOG00000019519	scrt2	96	56.075	ENSSMAG00000005122	-	97	56.075	Scophthalmus_maximus
ENSGMOG00000019519	scrt2	98	60.188	ENSSMAG00000019207	scrt1b	100	60.188	Scophthalmus_maximus
ENSGMOG00000019519	scrt2	96	56.604	ENSSDUG00000013215	-	97	56.604	Seriola_dumerili
ENSGMOG00000019519	scrt2	95	75.873	ENSSDUG00000001637	scrt2	95	75.873	Seriola_dumerili
ENSGMOG00000019519	scrt2	95	61.489	ENSSDUG00000007752	scrt1b	96	61.489	Seriola_dumerili
ENSGMOG00000019519	scrt2	96	56.604	ENSSLDG00000016454	-	97	56.604	Seriola_lalandi_dorsalis
ENSGMOG00000019519	scrt2	95	61.489	ENSSLDG00000017166	scrt1b	96	61.489	Seriola_lalandi_dorsalis
ENSGMOG00000019519	scrt2	99	80.243	ENSSLDG00000013565	scrt2	99	80.243	Seriola_lalandi_dorsalis
ENSGMOG00000019519	scrt2	96	56.774	ENSSPUG00000018637	SCRT2	97	57.097	Sphenodon_punctatus
ENSGMOG00000019519	scrt2	96	56.289	ENSSPAG00000006788	-	97	56.604	Stegastes_partitus
ENSGMOG00000019519	scrt2	95	61.489	ENSSPAG00000002200	scrt1b	96	61.489	Stegastes_partitus
ENSGMOG00000019519	scrt2	99	73.556	ENSSPAG00000014018	scrt2	99	73.556	Stegastes_partitus
ENSGMOG00000019519	scrt2	99	74.164	ENSTRUG00000007620	scrt2	99	74.164	Takifugu_rubripes
ENSGMOG00000019519	scrt2	96	56.289	ENSTRUG00000012719	-	97	56.918	Takifugu_rubripes
ENSGMOG00000019519	scrt2	95	59.416	ENSTRUG00000011637	scrt1b	97	59.416	Takifugu_rubripes
ENSGMOG00000019519	scrt2	99	77.812	ENSTNIG00000012473	scrt2	99	77.812	Tetraodon_nigroviridis
ENSGMOG00000019519	scrt2	95	59.091	ENSTNIG00000018384	scrt1b	96	59.091	Tetraodon_nigroviridis
ENSGMOG00000019519	scrt2	95	60.841	ENSXCOG00000019675	scrt1b	96	60.841	Xiphophorus_couchianus
ENSGMOG00000019519	scrt2	96	54.341	ENSXCOG00000019861	-	97	54.341	Xiphophorus_couchianus
ENSGMOG00000019519	scrt2	99	73.252	ENSXCOG00000014367	scrt2	99	73.252	Xiphophorus_couchianus
ENSGMOG00000019519	scrt2	99	78.723	ENSXMAG00000028567	scrt2	99	78.723	Xiphophorus_maculatus
ENSGMOG00000019519	scrt2	96	56.289	ENSXMAG00000015353	-	97	56.289	Xiphophorus_maculatus
ENSGMOG00000019519	scrt2	95	60.841	ENSXMAG00000027885	scrt1b	96	60.841	Xiphophorus_maculatus