EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000019832 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 360 bases
Position: chrGeneScaffold_4594:22824-23183
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000021319	LSM	PF01423.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021837	-	360	-	ENSGMOP00000021319	119 (aa)	-	UPI00023F4908

Gene Model

Click here to download ENSGMOG00000019832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000019832	oscp1a	66	33.333	ENSGMOG00000015607	snrpd1	65	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019832	oscp1a	90	64.486	ENSG00000181817	LSM10	87	64.486	Homo_sapiens
ENSGMOG00000019832	oscp1a	95	63.717	ENSAMEG00000019854	LSM10	91	63.717	Ailuropoda_melanoleuca
ENSGMOG00000019832	oscp1a	100	68.067	ENSACIG00000015420	oscp1a	79	68.067	Amphilophus_citrinellus
ENSGMOG00000019832	oscp1a	97	69.565	ENSAOCG00000014654	-	95	69.565	Amphiprion_ocellaris
ENSGMOG00000019832	oscp1a	97	69.565	ENSAOCG00000015618	LSM10	95	69.565	Amphiprion_ocellaris
ENSGMOG00000019832	oscp1a	92	72.973	ENSAOCG00000015607	LSM10	86	72.973	Amphiprion_ocellaris
ENSGMOG00000019832	oscp1a	92	72.973	ENSAPEG00000021851	LSM10	86	72.973	Amphiprion_percula
ENSGMOG00000019832	oscp1a	97	69.565	ENSAPEG00000021845	-	95	69.565	Amphiprion_percula
ENSGMOG00000019832	oscp1a	97	67.826	ENSATEG00000006310	oscp1a	85	67.826	Anabas_testudineus
ENSGMOG00000019832	oscp1a	96	60.870	ENSACAG00000001231	LSM10	93	60.870	Anolis_carolinensis
ENSGMOG00000019832	oscp1a	90	64.486	ENSANAG00000018759	-	87	64.486	Aotus_nancymaae
ENSGMOG00000019832	oscp1a	90	63.551	ENSANAG00000031489	-	88	63.551	Aotus_nancymaae
ENSGMOG00000019832	oscp1a	100	68.067	ENSACLG00000004728	oscp1a	97	68.067	Astatotilapia_calliptera
ENSGMOG00000019832	oscp1a	96	75.439	ENSAMXG00000025301	oscp1a	94	75.439	Astyanax_mexicanus
ENSGMOG00000019832	oscp1a	97	63.478	ENSBTAG00000024096	LSM10	93	63.478	Bos_taurus
ENSGMOG00000019832	oscp1a	90	64.486	ENSCJAG00000044880	LSM10	87	64.486	Callithrix_jacchus
ENSGMOG00000019832	oscp1a	96	63.158	ENSCAFG00000003382	LSM10	92	63.158	Canis_familiaris
ENSGMOG00000019832	oscp1a	96	63.158	ENSCAFG00020008920	LSM10	92	63.158	Canis_lupus_dingo
ENSGMOG00000019832	oscp1a	97	63.478	ENSCHIG00000009398	LSM10	93	63.478	Capra_hircus
ENSGMOG00000019832	oscp1a	98	63.333	ENSCAPG00000012567	LSM10	97	63.333	Cavia_aperea
ENSGMOG00000019832	oscp1a	98	63.333	ENSCPOG00000039302	LSM10	97	63.333	Cavia_porcellus
ENSGMOG00000019832	oscp1a	90	63.551	ENSCCAG00000008378	-	87	63.551	Cebus_capucinus
ENSGMOG00000019832	oscp1a	90	64.486	ENSCCAG00000018913	-	87	64.486	Cebus_capucinus
ENSGMOG00000019832	oscp1a	89	65.094	ENSCATG00000006589	LSM10	86	65.094	Cercocebus_atys
ENSGMOG00000019832	oscp1a	98	61.667	ENSCLAG00000008633	LSM10	97	61.667	Chinchilla_lanigera
ENSGMOG00000019832	oscp1a	89	65.094	ENSCSAG00000000134	LSM10	86	65.094	Chlorocebus_sabaeus
ENSGMOG00000019832	oscp1a	89	65.094	ENSCHOG00000008615	LSM10	85	65.094	Choloepus_hoffmanni
ENSGMOG00000019832	oscp1a	85	30.693	ENSCSAVG00000001896	-	86	30.693	Ciona_savignyi
ENSGMOG00000019832	oscp1a	89	65.094	ENSCANG00000019928	LSM10	86	65.094	Colobus_angolensis_palliatus
ENSGMOG00000019832	oscp1a	82	62.626	ENSCGRG00001022673	-	80	62.626	Cricetulus_griseus_chok1gshd
ENSGMOG00000019832	oscp1a	89	66.981	ENSCGRG00001004317	-	87	66.981	Cricetulus_griseus_chok1gshd
ENSGMOG00000019832	oscp1a	82	62.626	ENSCGRG00000015514	-	80	62.626	Cricetulus_griseus_crigri
ENSGMOG00000019832	oscp1a	89	66.981	ENSCGRG00000014935	-	87	66.981	Cricetulus_griseus_crigri
ENSGMOG00000019832	oscp1a	97	66.957	ENSCSEG00000010374	oscp1a	78	68.103	Cynoglossus_semilaevis
ENSGMOG00000019832	oscp1a	97	67.241	ENSCVAG00000001536	oscp1a	88	67.241	Cyprinodon_variegatus
ENSGMOG00000019832	oscp1a	71	75.000	ENSDARG00000109563	CABZ01074453.1	98	75.000	Danio_rerio
ENSGMOG00000019832	oscp1a	99	70.339	ENSDARG00000101222	oscp1a	98	70.339	Danio_rerio
ENSGMOG00000019832	oscp1a	90	66.355	ENSDNOG00000036662	LSM10	87	66.355	Dasypus_novemcinctus
ENSGMOG00000019832	oscp1a	95	63.717	ENSDORG00000007579	Lsm10	92	63.717	Dipodomys_ordii
ENSGMOG00000019832	oscp1a	97	62.069	ENSETEG00000005703	LSM10	96	62.069	Echinops_telfairi
ENSGMOG00000019832	oscp1a	93	50.450	ENSEBUG00000001312	oscp1a	91	50.450	Eptatretus_burgeri
ENSGMOG00000019832	oscp1a	90	66.355	ENSEASG00005012194	LSM10	87	66.355	Equus_asinus_asinus
ENSGMOG00000019832	oscp1a	90	66.355	ENSECAG00000005071	LSM10	87	66.355	Equus_caballus
ENSGMOG00000019832	oscp1a	89	66.981	ENSEEUG00000012032	LSM10	86	66.981	Erinaceus_europaeus
ENSGMOG00000019832	oscp1a	99	68.644	ENSELUG00000007452	oscp1a	97	68.644	Esox_lucius
ENSGMOG00000019832	oscp1a	96	63.478	ENSFALG00000000851	LSM10	93	63.478	Ficedula_albicollis
ENSGMOG00000019832	oscp1a	92	66.055	ENSFDAG00000021056	LSM10	88	66.055	Fukomys_damarensis
ENSGMOG00000019832	oscp1a	90	69.159	ENSFHEG00000001058	oscp1a	92	69.159	Fundulus_heteroclitus
ENSGMOG00000019832	oscp1a	96	66.957	ENSGALG00000002127	LSM10	93	66.957	Gallus_gallus
ENSGMOG00000019832	oscp1a	90	62.617	ENSGAFG00000016445	oscp1a	87	62.617	Gambusia_affinis
ENSGMOG00000019832	oscp1a	100	69.748	ENSGACG00000002329	oscp1a	98	69.748	Gasterosteus_aculeatus
ENSGMOG00000019832	oscp1a	96	66.957	ENSGAGG00000024848	LSM10	93	66.957	Gopherus_agassizii
ENSGMOG00000019832	oscp1a	90	64.486	ENSGGOG00000003556	LSM10	87	64.486	Gorilla_gorilla
ENSGMOG00000019832	oscp1a	100	68.908	ENSHBUG00000001722	oscp1a	97	68.908	Haplochromis_burtoni
ENSGMOG00000019832	oscp1a	98	61.667	ENSHGLG00000011625	LSM10	97	61.667	Heterocephalus_glaber_female
ENSGMOG00000019832	oscp1a	98	61.667	ENSHGLG00100001769	LSM10	97	61.667	Heterocephalus_glaber_male
ENSGMOG00000019832	oscp1a	96	70.175	ENSIPUG00000005808	oscp1a	99	70.175	Ictalurus_punctatus
ENSGMOG00000019832	oscp1a	96	64.035	ENSSTOG00000000606	LSM10	92	64.035	Ictidomys_tridecemlineatus
ENSGMOG00000019832	oscp1a	98	68.376	ENSKMAG00000012143	oscp1a	97	68.376	Kryptolebias_marmoratus
ENSGMOG00000019832	oscp1a	92	71.560	ENSLBEG00000017764	oscp1a	89	71.560	Labrus_bergylta
ENSGMOG00000019832	oscp1a	94	60.714	ENSLACG00000015904	LSM10	85	60.714	Latimeria_chalumnae
ENSGMOG00000019832	oscp1a	98	68.376	ENSLOCG00000018277	oscp1a	96	68.376	Lepisosteus_oculatus
ENSGMOG00000019832	oscp1a	89	66.981	ENSLAFG00000009600	LSM10	88	66.981	Loxodonta_africana
ENSGMOG00000019832	oscp1a	89	65.094	ENSMFAG00000009115	LSM10	86	65.094	Macaca_fascicularis
ENSGMOG00000019832	oscp1a	89	65.094	ENSMMUG00000017338	LSM10	86	65.094	Macaca_mulatta
ENSGMOG00000019832	oscp1a	89	65.094	ENSMNEG00000020023	LSM10	86	65.094	Macaca_nemestrina
ENSGMOG00000019832	oscp1a	89	65.094	ENSMLEG00000025150	LSM10	86	65.094	Mandrillus_leucophaeus
ENSGMOG00000019832	oscp1a	97	65.517	ENSMAMG00000004427	oscp1a	95	65.517	Mastacembelus_armatus
ENSGMOG00000019832	oscp1a	100	68.067	ENSMZEG00005026307	oscp1a	97	68.067	Maylandia_zebra
ENSGMOG00000019832	oscp1a	96	66.087	ENSMGAG00000015707	LSM10	93	66.087	Meleagris_gallopavo
ENSGMOG00000019832	oscp1a	89	66.981	ENSMAUG00000016624	Lsm10	87	66.981	Mesocricetus_auratus
ENSGMOG00000019832	oscp1a	89	66.038	ENSMOCG00000021943	Lsm10	87	66.038	Microtus_ochrogaster
ENSGMOG00000019832	oscp1a	97	71.304	ENSMMOG00000013597	oscp1a	86	71.304	Mola_mola
ENSGMOG00000019832	oscp1a	92	66.055	ENSMODG00000023328	LSM10	89	66.055	Monodelphis_domestica
ENSGMOG00000019832	oscp1a	53	74.603	ENSMALG00000012661	oscp1a	50	74.603	Monopterus_albus
ENSGMOG00000019832	oscp1a	89	66.981	MGP_CAROLIEiJ_G0026467	Lsm10	97	68.889	Mus_caroli
ENSGMOG00000019832	oscp1a	89	66.981	ENSMUSG00000050188	Lsm10	97	68.889	Mus_musculus
ENSGMOG00000019832	oscp1a	89	66.981	MGP_PahariEiJ_G0028798	Lsm10	97	68.889	Mus_pahari
ENSGMOG00000019832	oscp1a	89	66.981	MGP_SPRETEiJ_G0027446	Lsm10	97	68.889	Mus_spretus
ENSGMOG00000019832	oscp1a	96	63.158	ENSMPUG00000018593	LSM10	92	63.158	Mustela_putorius_furo
ENSGMOG00000019832	oscp1a	88	67.619	ENSMLUG00000023895	LSM10	85	67.619	Myotis_lucifugus
ENSGMOG00000019832	oscp1a	89	66.038	ENSNGAG00000015011	Lsm10	86	66.038	Nannospalax_galili
ENSGMOG00000019832	oscp1a	100	68.067	ENSNBRG00000014306	oscp1a	97	68.067	Neolamprologus_brichardi
ENSGMOG00000019832	oscp1a	90	64.486	ENSNLEG00000033754	LSM10	87	64.486	Nomascus_leucogenys
ENSGMOG00000019832	oscp1a	92	66.055	ENSMEUG00000006313	LSM10	89	66.055	Notamacropus_eugenii
ENSGMOG00000019832	oscp1a	88	64.762	ENSOPRG00000001699	LSM10	85	64.762	Ochotona_princeps
ENSGMOG00000019832	oscp1a	98	61.667	ENSODEG00000019161	LSM10	97	61.667	Octodon_degus
ENSGMOG00000019832	oscp1a	100	68.067	ENSONIG00000020904	oscp1a	98	68.067	Oreochromis_niloticus
ENSGMOG00000019832	oscp1a	99	60.833	ENSOANG00000002066	LSM10	98	60.833	Ornithorhynchus_anatinus
ENSGMOG00000019832	oscp1a	89	62.264	ENSOCUG00000005333	LSM10	86	62.264	Oryctolagus_cuniculus
ENSGMOG00000019832	oscp1a	94	71.429	ENSORLG00000009504	oscp1a	93	71.429	Oryzias_latipes
ENSGMOG00000019832	oscp1a	94	71.429	ENSORLG00020016201	oscp1a	93	71.429	Oryzias_latipes_hni
ENSGMOG00000019832	oscp1a	94	68.966	ENSORLG00015007794	oscp1a	97	68.966	Oryzias_latipes_hsok
ENSGMOG00000019832	oscp1a	95	64.602	ENSOGAG00000002653	LSM10	91	64.602	Otolemur_garnettii
ENSGMOG00000019832	oscp1a	97	63.478	ENSOARG00000009596	LSM10	93	63.478	Ovis_aries
ENSGMOG00000019832	oscp1a	90	64.486	ENSPPAG00000023465	LSM10	87	64.486	Pan_paniscus
ENSGMOG00000019832	oscp1a	89	66.981	ENSPPRG00000014619	LSM10	86	66.981	Panthera_pardus
ENSGMOG00000019832	oscp1a	89	66.981	ENSPTIG00000004613	LSM10	86	66.981	Panthera_tigris_altaica
ENSGMOG00000019832	oscp1a	90	64.486	ENSPTRG00000000539	LSM10	87	64.486	Pan_troglodytes
ENSGMOG00000019832	oscp1a	89	65.094	ENSPANG00000023172	LSM10	86	65.094	Papio_anubis
ENSGMOG00000019832	oscp1a	99	65.254	ENSPKIG00000003728	oscp1a	95	65.254	Paramormyrops_kingsleyae
ENSGMOG00000019832	oscp1a	96	65.217	ENSPSIG00000000590	LSM10	93	65.217	Pelodiscus_sinensis
ENSGMOG00000019832	oscp1a	65	72.727	ENSPMGG00000015718	oscp1a	100	72.727	Periophthalmus_magnuspinnatus
ENSGMOG00000019832	oscp1a	86	68.627	ENSPCIG00000014865	LSM10	75	68.627	Phascolarctos_cinereus
ENSGMOG00000019832	oscp1a	97	65.217	ENSPFOG00000020490	oscp1a	97	65.217	Poecilia_formosa
ENSGMOG00000019832	oscp1a	97	64.655	ENSPLAG00000016537	oscp1a	89	64.655	Poecilia_latipinna
ENSGMOG00000019832	oscp1a	92	64.545	ENSPMEG00000000174	oscp1a	96	64.545	Poecilia_mexicana
ENSGMOG00000019832	oscp1a	100	64.706	ENSPREG00000009899	oscp1a	91	64.706	Poecilia_reticulata
ENSGMOG00000019832	oscp1a	90	64.486	ENSPPYG00000001539	LSM10	87	64.486	Pongo_abelii
ENSGMOG00000019832	oscp1a	97	62.609	ENSPCAG00000002520	LSM10	95	62.609	Procavia_capensis
ENSGMOG00000019832	oscp1a	95	63.717	ENSPVAG00000008644	LSM10	91	63.717	Pteropus_vampyrus
ENSGMOG00000019832	oscp1a	100	68.908	ENSPNYG00000003138	oscp1a	97	68.908	Pundamilia_nyererei
ENSGMOG00000019832	oscp1a	97	72.174	ENSPNAG00000028829	oscp1a	96	72.174	Pygocentrus_nattereri
ENSGMOG00000019832	oscp1a	89	66.038	ENSRNOG00000025716	Lsm10	87	66.038	Rattus_norvegicus
ENSGMOG00000019832	oscp1a	89	65.094	ENSRBIG00000001561	LSM10	86	65.094	Rhinopithecus_bieti
ENSGMOG00000019832	oscp1a	89	65.094	ENSRROG00000011414	LSM10	86	65.094	Rhinopithecus_roxellana
ENSGMOG00000019832	oscp1a	90	64.486	ENSSBOG00000036413	-	87	64.486	Saimiri_boliviensis_boliviensis
ENSGMOG00000019832	oscp1a	92	66.055	ENSSHAG00000018056	LSM10	89	66.055	Sarcophilus_harrisii
ENSGMOG00000019832	oscp1a	99	66.949	ENSSFOG00015019954	lsm10	97	66.949	Scleropages_formosus
ENSGMOG00000019832	oscp1a	96	71.053	ENSSMAG00000001297	oscp1a	97	71.053	Scophthalmus_maximus
ENSGMOG00000019832	oscp1a	98	66.667	ENSSDUG00000007090	oscp1a	95	66.667	Seriola_dumerili
ENSGMOG00000019832	oscp1a	97	66.957	ENSSLDG00000000800	oscp1a	95	66.957	Seriola_lalandi_dorsalis
ENSGMOG00000019832	oscp1a	88	67.619	ENSSARG00000004211	LSM10	85	67.925	Sorex_araneus
ENSGMOG00000019832	oscp1a	98	69.231	ENSSPAG00000009229	oscp1a	97	69.231	Stegastes_partitus
ENSGMOG00000019832	oscp1a	90	65.421	ENSSSCG00000038916	LSM10	88	65.421	Sus_scrofa
ENSGMOG00000019832	oscp1a	96	63.478	ENSTGUG00000001600	-	94	63.478	Taeniopygia_guttata
ENSGMOG00000019832	oscp1a	96	64.348	ENSTGUG00000001602	-	94	64.348	Taeniopygia_guttata
ENSGMOG00000019832	oscp1a	99	64.407	ENSTRUG00000010531	oscp1a	95	64.407	Takifugu_rubripes
ENSGMOG00000019832	oscp1a	89	66.038	ENSTBEG00000016674	LSM10	86	66.038	Tupaia_belangeri
ENSGMOG00000019832	oscp1a	96	63.158	ENSUAMG00000020265	LSM10	92	63.158	Ursus_americanus
ENSGMOG00000019832	oscp1a	95	63.717	ENSUMAG00000001438	LSM10	52	63.717	Ursus_maritimus
ENSGMOG00000019832	oscp1a	96	63.158	ENSVVUG00000023209	LSM10	92	63.158	Vulpes_vulpes
ENSGMOG00000019832	oscp1a	91	62.037	ENSXETG00000027631	lsm10	89	62.037	Xenopus_tropicalis
ENSGMOG00000019832	oscp1a	97	65.517	ENSXCOG00000018776	oscp1a	73	65.517	Xiphophorus_couchianus
ENSGMOG00000019832	oscp1a	92	66.364	ENSXMAG00000019963	oscp1a	88	66.364	Xiphophorus_maculatus