EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000019972 (Gene tree)
Gene ID: -
Gene Symbol: sf3b5
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3b%2C subunit 5
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrGeneScaffold_128:53387-53647
Accession: ZDB-GENE-040718-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000021459	SF3b10	PF07189.11	5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021977	-	261	-	ENSGMOP00000021459	86 (aa)	-	UPI00023F44A3

Gene Model

Click here to download ENSGMOG00000019972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019972	sf3b5	99	92.941	ENSG00000169976	SF3B5	99	92.941	Homo_sapiens
ENSGMOG00000019972	sf3b5	100	96.512	ENSAPOG00000001721	sf3b5	100	96.512	Acanthochromis_polyacanthus
ENSGMOG00000019972	sf3b5	100	96.512	ENSACIG00000008106	sf3b5	100	96.512	Amphilophus_citrinellus
ENSGMOG00000019972	sf3b5	100	96.512	ENSAOCG00000023367	sf3b5	100	96.512	Amphiprion_ocellaris
ENSGMOG00000019972	sf3b5	100	96.512	ENSAPEG00000004605	sf3b5	100	96.512	Amphiprion_percula
ENSGMOG00000019972	sf3b5	100	97.674	ENSATEG00000009720	sf3b5	100	97.674	Anabas_testudineus
ENSGMOG00000019972	sf3b5	100	91.860	ENSACAG00000007948	SF3B5	100	91.860	Anolis_carolinensis
ENSGMOG00000019972	sf3b5	99	92.941	ENSANAG00000019999	SF3B5	99	92.941	Aotus_nancymaae
ENSGMOG00000019972	sf3b5	100	96.512	ENSACLG00000022410	sf3b5	100	96.512	Astatotilapia_calliptera
ENSGMOG00000019972	sf3b5	99	92.941	ENSBTAG00000009795	SF3B5	99	92.941	Bos_taurus
ENSGMOG00000019972	sf3b5	99	92.941	ENSCJAG00000046566	SF3B5	99	92.941	Callithrix_jacchus
ENSGMOG00000019972	sf3b5	99	92.941	ENSCAFG00000032495	SF3B5	99	92.941	Canis_familiaris
ENSGMOG00000019972	sf3b5	99	92.941	ENSCAFG00020000873	SF3B5	99	92.941	Canis_lupus_dingo
ENSGMOG00000019972	sf3b5	99	92.941	ENSCHIG00000007987	SF3B5	99	92.941	Capra_hircus
ENSGMOG00000019972	sf3b5	99	92.941	ENSTSYG00000012236	SF3B5	99	92.941	Carlito_syrichta
ENSGMOG00000019972	sf3b5	99	92.941	ENSCPOG00000012435	SF3B5	99	92.941	Cavia_porcellus
ENSGMOG00000019972	sf3b5	99	92.941	ENSCCAG00000006528	SF3B5	99	92.941	Cebus_capucinus
ENSGMOG00000019972	sf3b5	99	92.941	ENSCATG00000010192	SF3B5	99	92.941	Cercocebus_atys
ENSGMOG00000019972	sf3b5	99	92.941	ENSCLAG00000017802	SF3B5	99	92.941	Chinchilla_lanigera
ENSGMOG00000019972	sf3b5	99	92.941	ENSCSAG00000000187	SF3B5	99	92.941	Chlorocebus_sabaeus
ENSGMOG00000019972	sf3b5	100	91.860	ENSCPBG00000017148	SF3B5	100	91.860	Chrysemys_picta_bellii
ENSGMOG00000019972	sf3b5	98	73.810	ENSCING00000021953	-	98	73.810	Ciona_intestinalis
ENSGMOG00000019972	sf3b5	99	92.941	ENSCANG00000002639	SF3B5	99	92.941	Colobus_angolensis_palliatus
ENSGMOG00000019972	sf3b5	99	91.765	ENSCGRG00001007249	Sf3b5	99	91.765	Cricetulus_griseus_chok1gshd
ENSGMOG00000019972	sf3b5	99	91.765	ENSCGRG00000019185	Sf3b5	99	91.765	Cricetulus_griseus_crigri
ENSGMOG00000019972	sf3b5	100	96.512	ENSCSEG00000003216	sf3b5	100	96.512	Cynoglossus_semilaevis
ENSGMOG00000019972	sf3b5	100	97.674	ENSCVAG00000005040	sf3b5	100	97.674	Cyprinodon_variegatus
ENSGMOG00000019972	sf3b5	100	95.349	ENSDARG00000016855	sf3b5	100	95.349	Danio_rerio
ENSGMOG00000019972	sf3b5	99	92.941	ENSDNOG00000048829	SF3B5	81	92.941	Dasypus_novemcinctus
ENSGMOG00000019972	sf3b5	99	92.941	ENSDORG00000005838	Sf3b5	99	92.941	Dipodomys_ordii
ENSGMOG00000019972	sf3b5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSGMOG00000019972	sf3b5	99	92.941	ENSETEG00000004047	SF3B5	99	92.941	Echinops_telfairi
ENSGMOG00000019972	sf3b5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSGMOG00000019972	sf3b5	99	92.941	ENSEASG00005009522	SF3B5	99	92.941	Equus_asinus_asinus
ENSGMOG00000019972	sf3b5	99	92.941	ENSECAG00000005457	SF3B5	99	92.941	Equus_caballus
ENSGMOG00000019972	sf3b5	100	97.674	ENSELUG00000014290	SF3B5	100	97.674	Esox_lucius
ENSGMOG00000019972	sf3b5	99	92.941	ENSFCAG00000000936	SF3B5	99	92.941	Felis_catus
ENSGMOG00000019972	sf3b5	100	90.698	ENSFALG00000015012	SF3B5	100	90.698	Ficedula_albicollis
ENSGMOG00000019972	sf3b5	99	92.941	ENSFDAG00000003664	SF3B5	99	92.941	Fukomys_damarensis
ENSGMOG00000019972	sf3b5	100	97.674	ENSFHEG00000020301	sf3b5	100	97.674	Fundulus_heteroclitus
ENSGMOG00000019972	sf3b5	100	93.023	ENSGALG00000030824	SF3B5	100	93.023	Gallus_gallus
ENSGMOG00000019972	sf3b5	100	97.674	ENSGAFG00000000271	sf3b5	100	97.674	Gambusia_affinis
ENSGMOG00000019972	sf3b5	100	97.674	ENSGACG00000010363	sf3b5	100	97.674	Gasterosteus_aculeatus
ENSGMOG00000019972	sf3b5	100	91.860	ENSGAGG00000011434	SF3B5	100	91.860	Gopherus_agassizii
ENSGMOG00000019972	sf3b5	100	87.209	ENSGAGG00000000646	-	100	87.209	Gopherus_agassizii
ENSGMOG00000019972	sf3b5	99	92.941	ENSGGOG00000001537	SF3B5	99	92.941	Gorilla_gorilla
ENSGMOG00000019972	sf3b5	100	96.512	ENSHBUG00000008925	sf3b5	100	96.512	Haplochromis_burtoni
ENSGMOG00000019972	sf3b5	99	92.941	ENSHGLG00000021406	SF3B5	99	92.941	Heterocephalus_glaber_female
ENSGMOG00000019972	sf3b5	99	92.941	ENSHGLG00100020370	SF3B5	99	92.941	Heterocephalus_glaber_male
ENSGMOG00000019972	sf3b5	100	96.512	ENSHCOG00000009115	-	100	96.512	Hippocampus_comes
ENSGMOG00000019972	sf3b5	100	96.512	ENSHCOG00000016806	sf3b5	100	96.512	Hippocampus_comes
ENSGMOG00000019972	sf3b5	100	96.512	ENSHCOG00000016802	sf3b5	100	96.512	Hippocampus_comes
ENSGMOG00000019972	sf3b5	100	95.349	ENSIPUG00000015166	sf3b5	100	95.349	Ictalurus_punctatus
ENSGMOG00000019972	sf3b5	99	92.941	ENSSTOG00000003347	SF3B5	99	92.941	Ictidomys_tridecemlineatus
ENSGMOG00000019972	sf3b5	99	92.941	ENSJJAG00000001857	Sf3b5	99	92.941	Jaculus_jaculus
ENSGMOG00000019972	sf3b5	100	97.674	ENSKMAG00000002249	sf3b5	100	97.674	Kryptolebias_marmoratus
ENSGMOG00000019972	sf3b5	100	97.674	ENSLBEG00000019847	sf3b5	100	97.674	Labrus_bergylta
ENSGMOG00000019972	sf3b5	100	90.698	ENSLACG00000000946	SF3B5	100	90.698	Latimeria_chalumnae
ENSGMOG00000019972	sf3b5	100	96.512	ENSLOCG00000017352	sf3b5	100	96.512	Lepisosteus_oculatus
ENSGMOG00000019972	sf3b5	99	92.941	ENSLAFG00000032489	SF3B5	99	92.941	Loxodonta_africana
ENSGMOG00000019972	sf3b5	99	92.941	ENSMFAG00000029753	SF3B5	99	92.941	Macaca_fascicularis
ENSGMOG00000019972	sf3b5	99	92.941	ENSMMUG00000047691	SF3B5	99	92.941	Macaca_mulatta
ENSGMOG00000019972	sf3b5	99	92.941	ENSMNEG00000028236	SF3B5	99	92.941	Macaca_nemestrina
ENSGMOG00000019972	sf3b5	99	92.941	ENSMLEG00000007622	SF3B5	99	92.941	Mandrillus_leucophaeus
ENSGMOG00000019972	sf3b5	100	98.837	ENSMAMG00000021639	sf3b5	100	98.837	Mastacembelus_armatus
ENSGMOG00000019972	sf3b5	100	96.512	ENSMZEG00005028115	SF3B5	100	96.512	Maylandia_zebra
ENSGMOG00000019972	sf3b5	100	86.047	ENSMZEG00005027407	sf3b5	100	86.047	Maylandia_zebra
ENSGMOG00000019972	sf3b5	100	96.512	ENSMZEG00005027408	sf3b5	100	96.512	Maylandia_zebra
ENSGMOG00000019972	sf3b5	100	93.023	ENSMGAG00000015849	SF3B5	100	93.023	Meleagris_gallopavo
ENSGMOG00000019972	sf3b5	99	91.765	ENSMAUG00000008283	Sf3b5	99	91.765	Mesocricetus_auratus
ENSGMOG00000019972	sf3b5	99	92.941	ENSMICG00000014922	SF3B5	99	92.941	Microcebus_murinus
ENSGMOG00000019972	sf3b5	99	91.765	ENSMOCG00000001713	Sf3b5	99	91.765	Microtus_ochrogaster
ENSGMOG00000019972	sf3b5	100	98.837	ENSMMOG00000007956	sf3b5	100	98.837	Mola_mola
ENSGMOG00000019972	sf3b5	99	92.941	ENSMODG00000023291	SF3B5	83	92.941	Monodelphis_domestica
ENSGMOG00000019972	sf3b5	91	95.062	ENSMALG00000020357	sf3b5	99	95.062	Monopterus_albus
ENSGMOG00000019972	sf3b5	99	91.765	MGP_CAROLIEiJ_G0015120	Sf3b5	99	91.765	Mus_caroli
ENSGMOG00000019972	sf3b5	99	91.765	ENSMUSG00000078348	Sf3b5	99	91.765	Mus_musculus
ENSGMOG00000019972	sf3b5	99	91.765	MGP_PahariEiJ_G0023739	Sf3b5	99	91.765	Mus_pahari
ENSGMOG00000019972	sf3b5	99	91.765	MGP_SPRETEiJ_G0015928	Sf3b5	99	91.765	Mus_spretus
ENSGMOG00000019972	sf3b5	99	92.941	ENSMPUG00000018379	SF3B5	99	92.941	Mustela_putorius_furo
ENSGMOG00000019972	sf3b5	93	92.500	ENSMLUG00000025546	-	93	92.500	Myotis_lucifugus
ENSGMOG00000019972	sf3b5	99	92.941	ENSMLUG00000028504	-	99	92.941	Myotis_lucifugus
ENSGMOG00000019972	sf3b5	99	88.235	ENSMLUG00000010802	-	99	88.235	Myotis_lucifugus
ENSGMOG00000019972	sf3b5	99	92.941	ENSNGAG00000010732	Sf3b5	99	92.941	Nannospalax_galili
ENSGMOG00000019972	sf3b5	100	96.512	ENSNBRG00000014383	sf3b5	100	96.512	Neolamprologus_brichardi
ENSGMOG00000019972	sf3b5	99	92.941	ENSNLEG00000019307	SF3B5	99	92.941	Nomascus_leucogenys
ENSGMOG00000019972	sf3b5	99	92.941	ENSMEUG00000005440	-	99	92.941	Notamacropus_eugenii
ENSGMOG00000019972	sf3b5	99	92.941	ENSMEUG00000005445	-	99	92.941	Notamacropus_eugenii
ENSGMOG00000019972	sf3b5	99	94.118	ENSOPRG00000015107	SF3B5	99	94.118	Ochotona_princeps
ENSGMOG00000019972	sf3b5	99	92.941	ENSODEG00000019507	SF3B5	99	92.941	Octodon_degus
ENSGMOG00000019972	sf3b5	100	96.512	ENSONIG00000020725	sf3b5	100	96.512	Oreochromis_niloticus
ENSGMOG00000019972	sf3b5	67	93.103	ENSOANG00000015301	SF3B5	95	93.103	Ornithorhynchus_anatinus
ENSGMOG00000019972	sf3b5	99	92.941	ENSOCUG00000008752	SF3B5	99	92.941	Oryctolagus_cuniculus
ENSGMOG00000019972	sf3b5	100	97.674	ENSORLG00000004925	sf3b5	100	97.674	Oryzias_latipes
ENSGMOG00000019972	sf3b5	100	97.674	ENSORLG00020011625	sf3b5	100	97.674	Oryzias_latipes_hni
ENSGMOG00000019972	sf3b5	100	97.674	ENSORLG00015017061	sf3b5	100	97.674	Oryzias_latipes_hsok
ENSGMOG00000019972	sf3b5	100	97.674	ENSOMEG00000010620	sf3b5	100	97.674	Oryzias_melastigma
ENSGMOG00000019972	sf3b5	99	92.941	ENSOGAG00000012152	SF3B5	99	92.941	Otolemur_garnettii
ENSGMOG00000019972	sf3b5	92	93.671	ENSOARG00000019486	-	95	93.671	Ovis_aries
ENSGMOG00000019972	sf3b5	99	89.412	ENSOARG00000002617	SF3B5	99	89.412	Ovis_aries
ENSGMOG00000019972	sf3b5	99	92.941	ENSPPAG00000012940	SF3B5	99	92.941	Pan_paniscus
ENSGMOG00000019972	sf3b5	99	92.941	ENSPPRG00000021262	SF3B5	99	92.941	Panthera_pardus
ENSGMOG00000019972	sf3b5	99	92.941	ENSPTIG00000001952	SF3B5	99	92.941	Panthera_tigris_altaica
ENSGMOG00000019972	sf3b5	99	92.941	ENSPTRG00000018676	SF3B5	99	92.941	Pan_troglodytes
ENSGMOG00000019972	sf3b5	99	92.941	ENSPANG00000034242	SF3B5	99	92.941	Papio_anubis
ENSGMOG00000019972	sf3b5	100	96.512	ENSPKIG00000006057	sf3b5	100	96.512	Paramormyrops_kingsleyae
ENSGMOG00000019972	sf3b5	100	91.860	ENSPSIG00000001262	SF3B5	100	91.860	Pelodiscus_sinensis
ENSGMOG00000019972	sf3b5	100	96.512	ENSPMGG00000014804	sf3b5	100	96.512	Periophthalmus_magnuspinnatus
ENSGMOG00000019972	sf3b5	99	91.765	ENSPEMG00000012931	Sf3b5	99	91.765	Peromyscus_maniculatus_bairdii
ENSGMOG00000019972	sf3b5	100	89.535	ENSPMAG00000010296	sf3b5	100	89.535	Petromyzon_marinus
ENSGMOG00000019972	sf3b5	99	71.765	ENSPCIG00000025007	-	99	71.765	Phascolarctos_cinereus
ENSGMOG00000019972	sf3b5	92	96.203	ENSPCIG00000011344	-	77	96.203	Phascolarctos_cinereus
ENSGMOG00000019972	sf3b5	100	97.674	ENSPFOG00000019994	sf3b5	100	97.674	Poecilia_formosa
ENSGMOG00000019972	sf3b5	100	97.674	ENSPLAG00000008412	sf3b5	100	97.674	Poecilia_latipinna
ENSGMOG00000019972	sf3b5	100	97.674	ENSPMEG00000020050	sf3b5	100	97.674	Poecilia_mexicana
ENSGMOG00000019972	sf3b5	100	97.674	ENSPREG00000009242	sf3b5	100	97.674	Poecilia_reticulata
ENSGMOG00000019972	sf3b5	99	92.941	ENSPPYG00000017068	SF3B5	99	92.941	Pongo_abelii
ENSGMOG00000019972	sf3b5	99	92.941	ENSPCAG00000009332	SF3B5	99	92.941	Procavia_capensis
ENSGMOG00000019972	sf3b5	99	92.941	ENSPCOG00000013754	SF3B5	99	92.941	Propithecus_coquereli
ENSGMOG00000019972	sf3b5	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSGMOG00000019972	sf3b5	100	96.512	ENSPNYG00000002075	sf3b5	100	96.512	Pundamilia_nyererei
ENSGMOG00000019972	sf3b5	100	96.512	ENSPNAG00000004942	sf3b5	100	96.512	Pygocentrus_nattereri
ENSGMOG00000019972	sf3b5	99	91.765	ENSRNOG00000014908	Sf3b5	99	91.765	Rattus_norvegicus
ENSGMOG00000019972	sf3b5	99	92.941	ENSRBIG00000006301	SF3B5	99	92.941	Rhinopithecus_bieti
ENSGMOG00000019972	sf3b5	99	92.941	ENSRROG00000037067	SF3B5	99	92.941	Rhinopithecus_roxellana
ENSGMOG00000019972	sf3b5	99	92.941	ENSSBOG00000006122	SF3B5	99	92.941	Saimiri_boliviensis_boliviensis
ENSGMOG00000019972	sf3b5	99	91.765	ENSSHAG00000015670	SF3B5	99	91.765	Sarcophilus_harrisii
ENSGMOG00000019972	sf3b5	100	95.349	ENSSFOG00015015767	sf3b5	100	95.349	Scleropages_formosus
ENSGMOG00000019972	sf3b5	100	97.674	ENSSMAG00000018852	sf3b5	100	97.674	Scophthalmus_maximus
ENSGMOG00000019972	sf3b5	100	97.674	ENSSDUG00000018161	sf3b5	100	97.674	Seriola_dumerili
ENSGMOG00000019972	sf3b5	100	97.674	ENSSLDG00000014547	sf3b5	100	97.674	Seriola_lalandi_dorsalis
ENSGMOG00000019972	sf3b5	99	92.941	ENSSARG00000007820	SF3B5	99	92.941	Sorex_araneus
ENSGMOG00000019972	sf3b5	100	96.512	ENSSPAG00000009244	sf3b5	100	96.512	Stegastes_partitus
ENSGMOG00000019972	sf3b5	100	96.512	ENSSPAG00000017371	-	100	96.512	Stegastes_partitus
ENSGMOG00000019972	sf3b5	99	92.941	ENSSSCG00000035578	SF3B5	99	92.941	Sus_scrofa
ENSGMOG00000019972	sf3b5	100	93.023	ENSTGUG00000010810	SF3B5	100	93.023	Taeniopygia_guttata
ENSGMOG00000019972	sf3b5	100	96.512	ENSTRUG00000005577	sf3b5	100	96.512	Takifugu_rubripes
ENSGMOG00000019972	sf3b5	100	96.512	ENSTNIG00000001265	sf3b5	100	96.512	Tetraodon_nigroviridis
ENSGMOG00000019972	sf3b5	99	94.118	ENSTBEG00000003072	SF3B5	99	94.118	Tupaia_belangeri
ENSGMOG00000019972	sf3b5	99	92.941	ENSTTRG00000008817	SF3B5	99	92.941	Tursiops_truncatus
ENSGMOG00000019972	sf3b5	99	92.941	ENSUAMG00000027296	SF3B5	99	92.941	Ursus_americanus
ENSGMOG00000019972	sf3b5	99	92.941	ENSUMAG00000005448	SF3B5	99	92.941	Ursus_maritimus
ENSGMOG00000019972	sf3b5	99	92.941	ENSVPAG00000003826	SF3B5	99	92.941	Vicugna_pacos
ENSGMOG00000019972	sf3b5	99	92.941	ENSVVUG00000004703	SF3B5	99	92.941	Vulpes_vulpes
ENSGMOG00000019972	sf3b5	100	93.023	ENSXETG00000021409	sf3b5	100	93.023	Xenopus_tropicalis
ENSGMOG00000019972	sf3b5	100	97.674	ENSXMAG00000019971	sf3b5	100	97.674	Xiphophorus_maculatus