EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000020024 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 273 bases
Position: chrGeneScaffold_2454:648-920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000021511	zf-C2H2	PF00096.26	4.8e-19	1	3
ENSGMOP00000021511	zf-C2H2	PF00096.26	4.8e-19	2	3
ENSGMOP00000021511	zf-C2H2	PF00096.26	4.8e-19	3	3
ENSGMOP00000021511	zf-met	PF12874.7	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000022029	-	273	-	ENSGMOP00000021511	91 (aa)	-	UPI00023F450B

Gene Model

Click here to download ENSGMOG00000020024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000020024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000020024	-	100	53.247	ENSGMOG00000003238	-	100	53.247
ENSGMOG00000020024	-	100	51.250	ENSGMOG00000018506	-	84	51.250
ENSGMOG00000020024	-	100	39.560	ENSGMOG00000007538	znf366	63	39.560
ENSGMOG00000020024	-	100	39.560	ENSGMOG00000017555	znf710b	78	39.560
ENSGMOG00000020024	-	100	60.440	ENSGMOG00000005588	-	100	60.440
ENSGMOG00000020024	-	100	45.556	ENSGMOG00000004063	ZNF628	88	46.237
ENSGMOG00000020024	-	100	45.098	ENSGMOG00000019123	gfi1b	62	45.098
ENSGMOG00000020024	-	100	49.180	ENSGMOG00000012990	-	100	49.180
ENSGMOG00000020024	-	99	38.095	ENSGMOG00000000629	scrt1b	52	38.095
ENSGMOG00000020024	-	100	50.549	ENSGMOG00000011017	GZF1	55	50.549
ENSGMOG00000020024	-	99	33.721	ENSGMOG00000000493	-	80	33.721
ENSGMOG00000020024	-	100	53.846	ENSGMOG00000017518	-	63	53.846
ENSGMOG00000020024	-	100	44.156	ENSGMOG00000002669	snai2	51	44.156
ENSGMOG00000020024	-	100	52.381	ENSGMOG00000012038	prdm5	83	45.679
ENSGMOG00000020024	-	100	52.308	ENSGMOG00000004242	znf319b	81	52.308
ENSGMOG00000020024	-	100	50.617	ENSGMOG00000016007	-	85	50.617
ENSGMOG00000020024	-	100	43.750	ENSGMOG00000007809	-	85	43.750
ENSGMOG00000020024	-	100	39.216	ENSGMOG00000009850	-	63	39.216
ENSGMOG00000020024	-	100	47.727	ENSGMOG00000006668	znf236	50	47.727
ENSGMOG00000020024	-	86	36.111	ENSGMOG00000002375	-	63	36.111
ENSGMOG00000020024	-	100	47.500	ENSGMOG00000017526	-	93	47.500
ENSGMOG00000020024	-	100	41.758	ENSGMOG00000016554	znf646	70	41.758
ENSGMOG00000020024	-	100	39.683	ENSGMOG00000016613	-	97	35.294
ENSGMOG00000020024	-	100	57.143	ENSGMOG00000020149	si:dkeyp-113d7.1	100	57.143
ENSGMOG00000020024	-	99	41.667	ENSGMOG00000020146	-	81	41.667
ENSGMOG00000020024	-	100	55.294	ENSGMOG00000009187	ZNF626	73	55.556
ENSGMOG00000020024	-	100	52.239	ENSGMOG00000007875	ZNF319	99	52.239
ENSGMOG00000020024	-	100	52.747	ENSGMOG00000004315	-	95	52.747
ENSGMOG00000020024	-	100	44.000	ENSGMOG00000002344	zbtb41	55	44.000
ENSGMOG00000020024	-	100	46.053	ENSGMOG00000000494	-	97	46.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000020024	-	100	53.333	ENSDARG00000089715	si:cabz01054394.7	74	53.333	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000100001	znf1096	76	54.945	Danio_rerio
ENSGMOG00000020024	-	100	53.846	ENSDARG00000114437	zgc:173705	76	53.846	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000096189	si:dkey-54j5.2	76	54.945	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000091393	si:ch211-161m3.6	68	54.945	Danio_rerio
ENSGMOG00000020024	-	100	53.933	ENSDARG00000053695	zgc:162948	76	53.933	Danio_rerio
ENSGMOG00000020024	-	100	56.044	ENSDARG00000098087	si:dkey-30f3.2	76	56.044	Danio_rerio
ENSGMOG00000020024	-	100	58.242	ENSDARG00000103244	CABZ01081752.3	83	58.242	Danio_rerio
ENSGMOG00000020024	-	100	53.846	ENSDARG00000091477	znf1066	81	53.846	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000091994	znf1048	80	54.945	Danio_rerio
ENSGMOG00000020024	-	100	57.143	ENSDARG00000110229	zgc:173702	77	57.143	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000092938	znf1047	80	54.945	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000109381	CU457778.2	76	54.945	Danio_rerio
ENSGMOG00000020024	-	100	51.648	ENSDARG00000075417	zgc:175107	74	51.648	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000098986	znf1040	80	54.945	Danio_rerio
ENSGMOG00000020024	-	100	53.846	ENSDARG00000105137	zgc:173705	76	53.846	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000115450	CABZ01012382.1	76	54.945	Danio_rerio
ENSGMOG00000020024	-	100	53.409	ENSDARG00000113808	si:dkeyp-82b4.6	74	52.747	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000112725	si:dkey-22h13.2	76	54.945	Danio_rerio
ENSGMOG00000020024	-	100	54.945	ENSDARG00000102600	CABZ01003344.1	80	54.945	Danio_rerio
ENSGMOG00000020024	-	100	52.747	ENSDARG00000111550	CABZ01002702.1	72	52.747	Danio_rerio
ENSGMOG00000020024	-	100	47.727	ENSFHEG00000021020	-	63	47.727	Fundulus_heteroclitus
ENSGMOG00000020024	-	100	45.556	ENSKMAG00000011441	-	67	45.556	Kryptolebias_marmoratus
ENSGMOG00000020024	-	100	46.154	ENSPFOG00000003366	-	70	46.154	Poecilia_formosa
ENSGMOG00000020024	-	100	46.154	ENSPFOG00000022423	-	76	46.154	Poecilia_formosa
ENSGMOG00000020024	-	100	48.889	ENSPLAG00000023537	-	55	48.889	Poecilia_latipinna
ENSGMOG00000020024	-	100	51.136	ENSPREG00000005015	-	97	51.136	Poecilia_reticulata
ENSGMOG00000020024	-	97	88.235	ENSTRUG00000022969	-	66	88.235	Takifugu_rubripes
ENSGMOG00000020024	-	100	51.111	ENSXETG00000031310	-	62	47.778	Xenopus_tropicalis
ENSGMOG00000020024	-	100	53.846	ENSXCOG00000003499	-	54	53.846	Xiphophorus_couchianus
ENSGMOG00000020024	-	100	93.103	ENSXCOG00000015435	-	79	93.103	Xiphophorus_couchianus