EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000020353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 576 bases
Position: chrGeneScaffold_3411:5088-5663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000021842	RRM_1	PF00076.22	5.5e-34	1	2
ENSGMOP00000021842	RRM_1	PF00076.22	5.5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000022360	-	576	-	ENSGMOP00000021842	192 (aa)	-	UPI00023F4773

Gene Model

Click here to download ENSGMOG00000020353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000020353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000020353	-	86	37.079	ENSGMOG00000007179	cirbpb	51	37.500
ENSGMOG00000020353	-	86	42.105	ENSGMOG00000012137	cirbpa	54	41.558
ENSGMOG00000020353	-	82	40.789	ENSGMOG00000020447	-	50	40.789
ENSGMOG00000020353	-	82	37.179	ENSGMOG00000007596	-	76	37.179
ENSGMOG00000020353	-	85	34.783	ENSGMOG00000011182	ELAVL2	58	34.783
ENSGMOG00000020353	-	84	34.783	ENSGMOG00000006515	elavl4	60	34.783
ENSGMOG00000020353	-	78	30.872	ENSGMOG00000009633	rbm14b	55	30.872
ENSGMOG00000020353	-	89	35.673	ENSGMOG00000018481	hnrnpd	52	35.673
ENSGMOG00000020353	-	97	58.602	ENSGMOG00000004230	HNRNPA3	53	59.551
ENSGMOG00000020353	-	86	36.232	ENSGMOG00000003760	elavl3	61	36.232
ENSGMOG00000020353	-	95	73.077	ENSGMOG00000016232	HNRNPA0	64	73.077
ENSGMOG00000020353	-	91	32.877	ENSGMOG00000006107	celf3b	57	32.877
ENSGMOG00000020353	-	100	37.681	ENSGMOG00000001142	dazap1	53	38.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000020353	-	98	61.905	ENSAPOG00000019369	-	55	61.667	Acanthochromis_polyacanthus
ENSGMOG00000020353	-	94	74.444	ENSACIG00000021815	-	88	74.444	Amphilophus_citrinellus
ENSGMOG00000020353	-	98	61.905	ENSAOCG00000005289	-	55	61.667	Amphiprion_ocellaris
ENSGMOG00000020353	-	98	61.905	ENSAPEG00000004179	-	55	61.667	Amphiprion_percula
ENSGMOG00000020353	-	92	76.875	ENSATEG00000003423	-	76	76.875	Anabas_testudineus
ENSGMOG00000020353	-	98	60.847	ENSATEG00000022918	hnrnpa1a	86	60.894	Anabas_testudineus
ENSGMOG00000020353	-	93	66.480	ENSACAG00000017109	-	56	65.385	Anolis_carolinensis
ENSGMOG00000020353	-	94	62.011	ENSACLG00000006940	-	55	61.667	Astatotilapia_calliptera
ENSGMOG00000020353	-	93	80.571	ENSAMXG00000037730	-	66	80.337	Astyanax_mexicanus
ENSGMOG00000020353	-	93	70.950	ENSCSEG00000014051	-	73	70.950	Cynoglossus_semilaevis
ENSGMOG00000020353	-	97	59.893	ENSCSEG00000007589	hnrnpa1a	68	60.335	Cynoglossus_semilaevis
ENSGMOG00000020353	-	94	61.453	ENSCVAG00000012637	hnrnpa1a	54	61.453	Cyprinodon_variegatus
ENSGMOG00000020353	-	99	65.816	ENSDORG00000026425	-	52	66.484	Dipodomys_ordii
ENSGMOG00000020353	-	98	58.201	ENSELUG00000007372	-	50	59.322	Esox_lucius
ENSGMOG00000020353	-	98	61.905	ENSGAFG00000007751	-	54	62.011	Gambusia_affinis
ENSGMOG00000020353	-	92	72.881	ENSGAFG00000016803	-	53	72.881	Gambusia_affinis
ENSGMOG00000020353	-	94	61.667	ENSHBUG00000005647	hnrnpa1a	55	61.667	Haplochromis_burtoni
ENSGMOG00000020353	-	93	80.899	ENSIPUG00000001991	-	76	80.899	Ictalurus_punctatus
ENSGMOG00000020353	-	98	55.789	ENSIPUG00000002023	hnrnpa1a	76	58.286	Ictalurus_punctatus
ENSGMOG00000020353	-	92	59.887	ENSIPUG00000022440	-	70	60.123	Ictalurus_punctatus
ENSGMOG00000020353	-	94	60.894	ENSKMAG00000020859	-	54	60.894	Kryptolebias_marmoratus
ENSGMOG00000020353	-	94	61.453	ENSLBEG00000010010	hnrnpa1a	53	61.453	Labrus_bergylta
ENSGMOG00000020353	-	94	50.000	ENSMFAG00000028351	-	54	50.000	Macaca_fascicularis
ENSGMOG00000020353	-	94	61.326	ENSMAMG00000007606	-	54	61.111	Mastacembelus_armatus
ENSGMOG00000020353	-	94	61.667	ENSMZEG00005027173	hnrnpa1a	55	61.667	Maylandia_zebra
ENSGMOG00000020353	-	95	60.221	ENSMMOG00000008251	hnrnpa1a	76	60.000	Mola_mola
ENSGMOG00000020353	-	92	74.011	ENSMALG00000008886	-	86	74.011	Monopterus_albus
ENSGMOG00000020353	-	98	60.417	ENSMALG00000014091	hnrnpa1a	53	60.556	Monopterus_albus
ENSGMOG00000020353	-	94	62.011	ENSNBRG00000018441	-	55	61.667	Neolamprologus_brichardi
ENSGMOG00000020353	-	97	76.882	ENSNBRG00000014469	-	83	78.212	Neolamprologus_brichardi
ENSGMOG00000020353	-	94	61.667	ENSORLG00000008001	-	56	61.667	Oryzias_latipes
ENSGMOG00000020353	-	95	60.109	ENSORLG00000029240	-	95	60.335	Oryzias_latipes
ENSGMOG00000020353	-	95	58.824	ENSORLG00020022498	-	89	58.647	Oryzias_latipes_hni
ENSGMOG00000020353	-	95	60.989	ENSORLG00020006582	hnrnpa1a	85	60.989	Oryzias_latipes_hni
ENSGMOG00000020353	-	94	61.364	ENSORLG00020006043	-	60	61.364	Oryzias_latipes_hni
ENSGMOG00000020353	-	94	62.011	ENSORLG00015022294	-	56	61.667	Oryzias_latipes_hsok
ENSGMOG00000020353	-	94	61.667	ENSOMEG00000015959	-	56	61.667	Oryzias_melastigma
ENSGMOG00000020353	-	95	59.890	ENSPMGG00000011804	hnrnpa1a	72	61.364	Periophthalmus_magnuspinnatus
ENSGMOG00000020353	-	95	73.481	ENSPMGG00000016392	-	93	73.889	Periophthalmus_magnuspinnatus
ENSGMOG00000020353	-	98	61.905	ENSPFOG00000001825	-	54	62.011	Poecilia_formosa
ENSGMOG00000020353	-	98	61.905	ENSPMEG00000002425	-	54	62.011	Poecilia_mexicana
ENSGMOG00000020353	-	97	76.882	ENSPNYG00000020729	-	91	78.212	Pundamilia_nyererei
ENSGMOG00000020353	-	97	58.730	ENSPNAG00000021630	-	55	60.112	Pygocentrus_nattereri
ENSGMOG00000020353	-	94	57.237	ENSPNAG00000007752	hnrnpa1a	72	56.497	Pygocentrus_nattereri
ENSGMOG00000020353	-	95	59.444	ENSSMAG00000004641	hnrnpa1a	60	59.444	Scophthalmus_maximus
ENSGMOG00000020353	-	92	74.850	ENSSMAG00000010279	-	94	74.850	Scophthalmus_maximus
ENSGMOG00000020353	-	91	73.563	ENSSMAG00000010246	-	78	73.563	Scophthalmus_maximus
ENSGMOG00000020353	-	92	78.613	ENSSDUG00000002431	-	82	78.613	Seriola_dumerili
ENSGMOG00000020353	-	97	61.497	ENSSDUG00000013908	hnrnpa1a	84	61.667	Seriola_dumerili
ENSGMOG00000020353	-	97	61.497	ENSSLDG00000003718	hnrnpa1a	79	61.446	Seriola_lalandi_dorsalis
ENSGMOG00000020353	-	98	61.376	ENSSPAG00000018518	-	56	61.667	Stegastes_partitus
ENSGMOG00000020353	-	97	59.043	ENSTRUG00000020491	-	56	58.659	Takifugu_rubripes
ENSGMOG00000020353	-	97	78.919	ENSTNIG00000007398	-	81	78.889	Tetraodon_nigroviridis
ENSGMOG00000020353	-	94	61.667	ENSXCOG00000009001	-	78	61.798	Xiphophorus_couchianus
ENSGMOG00000020353	-	98	61.376	ENSXMAG00000008076	-	53	61.453	Xiphophorus_maculatus