EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000000013 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC102293635
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7858 bases
Position: chrJH425362.1:2077413-2085270
Accession: 102293635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000564	Sua5_yciO_yrdC	PF01300.18	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015262	-	2265	XM_014333300	ENSHBUP00000000564	754 (aa)	XP_014188786	-

Gene Model

Click here to download ENSHBUG00000000013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000000013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	ENSHBUG00000001760	si:ch211-153b23.3	56	32.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000000013	si:ch211-153b23.4	89	83.482	ENSAPOG00000006178	si:ch211-153b23.4	78	83.482	Acanthochromis_polyacanthus
ENSHBUG00000000013	si:ch211-153b23.4	89	83.482	ENSAPOG00000006144	si:ch211-153b23.4	79	83.482	Acanthochromis_polyacanthus
ENSHBUG00000000013	si:ch211-153b23.4	89	88.113	ENSACIG00000006997	si:ch211-153b23.4	79	88.113	Amphilophus_citrinellus
ENSHBUG00000000013	si:ch211-153b23.4	89	78.571	ENSAOCG00000010999	si:ch211-153b23.4	81	78.571	Amphiprion_ocellaris
ENSHBUG00000000013	si:ch211-153b23.4	65	33.138	ENSAOCG00000010974	si:ch211-153b23.3	56	33.138	Amphiprion_ocellaris
ENSHBUG00000000013	si:ch211-153b23.4	65	32.816	ENSAPEG00000014700	si:ch211-153b23.3	56	32.544	Amphiprion_percula
ENSHBUG00000000013	si:ch211-153b23.4	89	80.060	ENSAPEG00000014665	si:ch211-153b23.4	79	80.060	Amphiprion_percula
ENSHBUG00000000013	si:ch211-153b23.4	88	83.837	ENSATEG00000004948	si:ch211-153b23.4	75	83.837	Anabas_testudineus
ENSHBUG00000000013	si:ch211-153b23.4	64	31.800	ENSATEG00000004956	si:ch211-153b23.3	55	31.800	Anabas_testudineus
ENSHBUG00000000013	si:ch211-153b23.4	89	60.059	ENSAPLG00000013596	-	82	60.059	Anas_platyrhynchos
ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	ENSACLG00000005894	si:ch211-153b23.3	56	32.821	Astatotilapia_calliptera
ENSHBUG00000000013	si:ch211-153b23.4	89	98.514	ENSACLG00000005471	si:ch211-153b23.4	76	98.514	Astatotilapia_calliptera
ENSHBUG00000000013	si:ch211-153b23.4	89	71.068	ENSAMXG00000013879	si:ch211-153b23.4	79	71.068	Astyanax_mexicanus
ENSHBUG00000000013	si:ch211-153b23.4	80	30.000	ENSAMXG00000038564	si:ch211-153b23.3	70	30.000	Astyanax_mexicanus
ENSHBUG00000000013	si:ch211-153b23.4	89	77.151	ENSCSEG00000014838	si:ch211-153b23.4	80	77.151	Cynoglossus_semilaevis
ENSHBUG00000000013	si:ch211-153b23.4	64	33.600	ENSCSEG00000014853	si:ch211-153b23.3	55	33.600	Cynoglossus_semilaevis
ENSHBUG00000000013	si:ch211-153b23.4	89	81.157	ENSCVAG00000021145	si:ch211-153b23.4	83	81.157	Cyprinodon_variegatus
ENSHBUG00000000013	si:ch211-153b23.4	64	32.934	ENSCVAG00000021124	si:ch211-153b23.3	55	32.934	Cyprinodon_variegatus
ENSHBUG00000000013	si:ch211-153b23.4	89	70.536	ENSDARG00000077169	si:ch211-153b23.4	76	70.536	Danio_rerio
ENSHBUG00000000013	si:ch211-153b23.4	89	70.015	ENSELUG00000004961	si:ch211-153b23.4	76	70.015	Esox_lucius
ENSHBUG00000000013	si:ch211-153b23.4	86	58.243	ENSFALG00000011343	-	76	57.744	Ficedula_albicollis
ENSHBUG00000000013	si:ch211-153b23.4	64	32.520	ENSFHEG00000010030	si:ch211-153b23.3	55	32.114	Fundulus_heteroclitus
ENSHBUG00000000013	si:ch211-153b23.4	89	80.861	ENSFHEG00000010001	si:ch211-153b23.4	84	80.861	Fundulus_heteroclitus
ENSHBUG00000000013	si:ch211-153b23.4	73	88.554	ENSFHEG00000009888	si:ch211-153b23.4	61	88.554	Fundulus_heteroclitus
ENSHBUG00000000013	si:ch211-153b23.4	86	81.748	ENSGAFG00000007442	si:ch211-153b23.4	78	81.748	Gambusia_affinis
ENSHBUG00000000013	si:ch211-153b23.4	64	33.534	ENSGAFG00000007455	si:ch211-153b23.3	55	33.534	Gambusia_affinis
ENSHBUG00000000013	si:ch211-153b23.4	89	80.208	ENSGACG00000018253	si:ch211-153b23.4	79	80.208	Gasterosteus_aculeatus
ENSHBUG00000000013	si:ch211-153b23.4	88	61.642	ENSGAGG00000024601	-	90	61.642	Gopherus_agassizii
ENSHBUG00000000013	si:ch211-153b23.4	89	70.431	ENSIPUG00000015205	si:ch211-153b23.4	80	70.431	Ictalurus_punctatus
ENSHBUG00000000013	si:ch211-153b23.4	89	83.111	ENSKMAG00000006829	si:ch211-153b23.4	83	83.111	Kryptolebias_marmoratus
ENSHBUG00000000013	si:ch211-153b23.4	73	30.864	ENSKMAG00000006792	si:ch211-153b23.3	63	30.864	Kryptolebias_marmoratus
ENSHBUG00000000013	si:ch211-153b23.4	89	83.531	ENSKMAG00000006919	-	77	83.531	Kryptolebias_marmoratus
ENSHBUG00000000013	si:ch211-153b23.4	89	81.129	ENSLBEG00000026309	si:ch211-153b23.4	77	81.129	Labrus_bergylta
ENSHBUG00000000013	si:ch211-153b23.4	66	32.277	ENSLBEG00000026324	si:ch211-153b23.3	53	32.277	Labrus_bergylta
ENSHBUG00000000013	si:ch211-153b23.4	88	64.414	ENSLACG00000017592	si:ch211-153b23.4	80	64.414	Latimeria_chalumnae
ENSHBUG00000000013	si:ch211-153b23.4	88	86.036	ENSMAMG00000009277	si:ch211-153b23.4	81	85.863	Mastacembelus_armatus
ENSHBUG00000000013	si:ch211-153b23.4	64	31.653	ENSMAMG00000009328	si:ch211-153b23.3	55	31.653	Mastacembelus_armatus
ENSHBUG00000000013	si:ch211-153b23.4	88	85.435	ENSMAMG00000009358	si:ch211-153b23.4	82	85.268	Mastacembelus_armatus
ENSHBUG00000000013	si:ch211-153b23.4	89	98.068	ENSMZEG00005011433	si:ch211-153b23.4	82	98.068	Maylandia_zebra
ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	ENSMZEG00005011450	si:ch211-153b23.3	56	32.821	Maylandia_zebra
ENSHBUG00000000013	si:ch211-153b23.4	89	59.615	ENSMGAG00000005478	-	82	59.615	Meleagris_gallopavo
ENSHBUG00000000013	si:ch211-153b23.4	89	80.804	ENSMMOG00000004425	si:ch211-153b23.4	83	80.804	Mola_mola
ENSHBUG00000000013	si:ch211-153b23.4	89	97.474	ENSNBRG00000013392	si:ch211-153b23.4	84	97.474	Neolamprologus_brichardi
ENSHBUG00000000013	si:ch211-153b23.4	65	33.013	ENSNBRG00000013370	si:ch211-153b23.3	56	33.013	Neolamprologus_brichardi
ENSHBUG00000000013	si:ch211-153b23.4	89	97.028	ENSONIG00000017875	si:ch211-153b23.4	77	97.028	Oreochromis_niloticus
ENSHBUG00000000013	si:ch211-153b23.4	64	33.800	ENSORLG00000006161	si:ch211-153b23.3	57	33.800	Oryzias_latipes
ENSHBUG00000000013	si:ch211-153b23.4	89	80.415	ENSORLG00000006169	si:ch211-153b23.4	77	80.415	Oryzias_latipes
ENSHBUG00000000013	si:ch211-153b23.4	89	80.861	ENSORLG00020009905	si:ch211-153b23.4	77	80.861	Oryzias_latipes_hni
ENSHBUG00000000013	si:ch211-153b23.4	80	30.880	ENSORLG00020000910	si:ch211-153b23.3	74	30.880	Oryzias_latipes_hni
ENSHBUG00000000013	si:ch211-153b23.4	80	30.671	ENSORLG00015003698	si:ch211-153b23.3	74	30.671	Oryzias_latipes_hsok
ENSHBUG00000000013	si:ch211-153b23.4	89	80.861	ENSORLG00015003709	si:ch211-153b23.4	77	80.861	Oryzias_latipes_hsok
ENSHBUG00000000013	si:ch211-153b23.4	63	33.063	ENSOMEG00000007661	si:ch211-153b23.3	56	33.063	Oryzias_melastigma
ENSHBUG00000000013	si:ch211-153b23.4	89	80.861	ENSOMEG00000007682	si:ch211-153b23.4	77	80.861	Oryzias_melastigma
ENSHBUG00000000013	si:ch211-153b23.4	64	32.238	ENSPKIG00000022450	si:ch211-153b23.3	55	32.238	Paramormyrops_kingsleyae
ENSHBUG00000000013	si:ch211-153b23.4	89	67.459	ENSPKIG00000014429	si:ch211-153b23.4	80	67.459	Paramormyrops_kingsleyae
ENSHBUG00000000013	si:ch211-153b23.4	89	71.259	ENSPKIG00000025681	si:ch211-153b23.4	78	71.259	Paramormyrops_kingsleyae
ENSHBUG00000000013	si:ch211-153b23.4	89	63.314	ENSPMGG00000001313	si:ch211-153b23.4	75	63.314	Periophthalmus_magnuspinnatus
ENSHBUG00000000013	si:ch211-153b23.4	86	81.424	ENSPFOG00000012164	si:ch211-153b23.4	91	81.424	Poecilia_formosa
ENSHBUG00000000013	si:ch211-153b23.4	64	33.333	ENSPFOG00000012289	si:ch211-153b23.3	55	33.333	Poecilia_formosa
ENSHBUG00000000013	si:ch211-153b23.4	89	79.822	ENSPLAG00000016295	si:ch211-153b23.4	84	79.822	Poecilia_latipinna
ENSHBUG00000000013	si:ch211-153b23.4	64	33.333	ENSPLAG00000016320	si:ch211-153b23.3	55	32.932	Poecilia_latipinna
ENSHBUG00000000013	si:ch211-153b23.4	64	33.133	ENSPMEG00000008884	si:ch211-153b23.3	55	33.133	Poecilia_mexicana
ENSHBUG00000000013	si:ch211-153b23.4	89	78.042	ENSPMEG00000007538	si:ch211-153b23.4	82	78.042	Poecilia_mexicana
ENSHBUG00000000013	si:ch211-153b23.4	89	98.068	ENSPNYG00000000250	si:ch211-153b23.4	82	98.068	Pundamilia_nyererei
ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	ENSPNYG00000000251	si:ch211-153b23.3	56	32.821	Pundamilia_nyererei
ENSHBUG00000000013	si:ch211-153b23.4	79	30.128	ENSPNAG00000019592	si:ch211-153b23.3	69	30.128	Pygocentrus_nattereri
ENSHBUG00000000013	si:ch211-153b23.4	89	72.889	ENSPNAG00000019554	si:ch211-153b23.4	76	72.889	Pygocentrus_nattereri
ENSHBUG00000000013	si:ch211-153b23.4	65	32.389	ENSSFOG00015010910	si:ch211-153b23.3	54	32.389	Scleropages_formosus
ENSHBUG00000000013	si:ch211-153b23.4	97	64.484	ENSSFOG00015010891	si:ch211-153b23.4	92	64.484	Scleropages_formosus
ENSHBUG00000000013	si:ch211-153b23.4	89	68.029	ENSSFOG00015003920	-	78	68.029	Scleropages_formosus
ENSHBUG00000000013	si:ch211-153b23.4	64	33.134	ENSSMAG00000005446	si:ch211-153b23.3	55	33.134	Scophthalmus_maximus
ENSHBUG00000000013	si:ch211-153b23.4	89	81.696	ENSSMAG00000010067	si:ch211-153b23.4	78	81.696	Scophthalmus_maximus
ENSHBUG00000000013	si:ch211-153b23.4	76	83.304	ENSSDUG00000006931	si:ch211-153b23.4	78	83.304	Seriola_dumerili
ENSHBUG00000000013	si:ch211-153b23.4	88	84.139	ENSSDUG00000006671	si:ch211-153b23.4	82	84.139	Seriola_dumerili
ENSHBUG00000000013	si:ch211-153b23.4	77	83.408	ENSSDUG00000006842	si:ch211-153b23.4	72	83.408	Seriola_dumerili
ENSHBUG00000000013	si:ch211-153b23.4	65	33.661	ENSSLDG00000008629	si:ch211-153b23.3	53	33.661	Seriola_lalandi_dorsalis
ENSHBUG00000000013	si:ch211-153b23.4	89	58.754	ENSTGUG00000005499	-	82	58.754	Taeniopygia_guttata
ENSHBUG00000000013	si:ch211-153b23.4	89	78.190	ENSTRUG00000003247	si:ch211-153b23.4	83	78.190	Takifugu_rubripes
ENSHBUG00000000013	si:ch211-153b23.4	65	33.806	ENSTRUG00000020530	si:ch211-153b23.3	53	33.806	Takifugu_rubripes
ENSHBUG00000000013	si:ch211-153b23.4	89	77.712	ENSTNIG00000008958	si:ch211-153b23.4	81	77.712	Tetraodon_nigroviridis
ENSHBUG00000000013	si:ch211-153b23.4	89	58.718	ENSXETG00000004489	-	73	58.718	Xenopus_tropicalis
ENSHBUG00000000013	si:ch211-153b23.4	64	33.199	ENSXMAG00000029318	si:ch211-153b23.3	56	32.797	Xiphophorus_maculatus
ENSHBUG00000000013	si:ch211-153b23.4	89	81.157	ENSXMAG00000009416	-	79	81.157	Xiphophorus_maculatus
ENSHBUG00000000013	si:ch211-153b23.4	89	81.157	ENSXMAG00000021388	si:ch211-153b23.4	81	81.157	Xiphophorus_maculatus