EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000000027 (Gene tree)
Gene ID: 102306854
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 10181 bases
Position: chrJH425594.1:147403-157583
Accession: 102306854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000916	RRM_1	PF00076.22	5.5e-05	1	1
ENSHBUP00000022073	RRM_1	PF00076.22	6.8e-05	1	1
ENSHBUP00000000943	RRM_1	PF00076.22	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014619	-	5534	XM_005939708	ENSHBUP00000000943	797 (aa)	XP_005939770	UPI000329EAA1
ENSHBUT00000014632	-	5327	-	ENSHBUP00000022073	728 (aa)	-	-
ENSHBUT00000014644	-	1914	-	ENSHBUP00000000916	637 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000000027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000000027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000000027	cnot4a	91	90.566	ENSG00000080802	CNOT4	99	90.566	Homo_sapiens
ENSHBUG00000000027	cnot4a	94	100.000	ENSAPOG00000016272	cnot4a	98	100.000	Acanthochromis_polyacanthus
ENSHBUG00000000027	cnot4a	93	87.215	ENSAMEG00000012081	CNOT4	92	86.937	Ailuropoda_melanoleuca
ENSHBUG00000000027	cnot4a	100	100.000	ENSACIG00000003011	cnot4a	100	97.247	Amphilophus_citrinellus
ENSHBUG00000000027	cnot4a	100	99.630	ENSAOCG00000010792	cnot4a	100	99.630	Amphiprion_ocellaris
ENSHBUG00000000027	cnot4a	100	99.630	ENSAPEG00000004680	cnot4a	100	99.630	Amphiprion_percula
ENSHBUG00000000027	cnot4a	100	99.630	ENSATEG00000017580	cnot4a	100	99.630	Anabas_testudineus
ENSHBUG00000000027	cnot4a	100	70.074	ENSAPLG00000016441	CNOT4	100	69.420	Anas_platyrhynchos
ENSHBUG00000000027	cnot4a	100	70.284	ENSACAG00000011154	CNOT4	100	70.160	Anolis_carolinensis
ENSHBUG00000000027	cnot4a	91	90.566	ENSANAG00000032156	CNOT4	99	90.566	Aotus_nancymaae
ENSHBUG00000000027	cnot4a	100	100.000	ENSACLG00000002514	cnot4a	100	100.000	Astatotilapia_calliptera
ENSHBUG00000000027	cnot4a	100	92.251	ENSAMXG00000011473	cnot4b	100	92.222	Astyanax_mexicanus
ENSHBUG00000000027	cnot4a	85	95.185	ENSAMXG00000001373	cnot4a	100	95.185	Astyanax_mexicanus
ENSHBUG00000000027	cnot4a	92	88.321	ENSBTAG00000017919	CNOT4	100	88.321	Bos_taurus
ENSHBUG00000000027	cnot4a	91	90.566	ENSCJAG00000012532	CNOT4	99	90.566	Callithrix_jacchus
ENSHBUG00000000027	cnot4a	91	90.566	ENSCAFG00000003223	CNOT4	99	90.566	Canis_familiaris
ENSHBUG00000000027	cnot4a	88	90.566	ENSCAFG00020000093	CNOT4	99	90.566	Canis_lupus_dingo
ENSHBUG00000000027	cnot4a	92	88.321	ENSCHIG00000010955	CNOT4	99	90.566	Capra_hircus
ENSHBUG00000000027	cnot4a	91	90.566	ENSTSYG00000000893	CNOT4	99	90.566	Carlito_syrichta
ENSHBUG00000000027	cnot4a	91	90.189	ENSCAPG00000006213	CNOT4	99	90.189	Cavia_aperea
ENSHBUG00000000027	cnot4a	91	90.566	ENSCPOG00000011526	CNOT4	99	90.566	Cavia_porcellus
ENSHBUG00000000027	cnot4a	92	88.321	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSHBUG00000000027	cnot4a	92	88.321	ENSCATG00000022607	CNOT4	100	88.321	Cercocebus_atys
ENSHBUG00000000027	cnot4a	91	90.566	ENSCLAG00000001857	CNOT4	99	90.566	Chinchilla_lanigera
ENSHBUG00000000027	cnot4a	91	90.566	ENSCSAG00000009096	CNOT4	99	90.566	Chlorocebus_sabaeus
ENSHBUG00000000027	cnot4a	68	93.583	ENSCHOG00000010412	CNOT4	67	93.583	Choloepus_hoffmanni
ENSHBUG00000000027	cnot4a	99	83.333	ENSCPBG00000004959	CNOT4	99	89.299	Chrysemys_picta_bellii
ENSHBUG00000000027	cnot4a	62	68.699	ENSCING00000004364	-	61	68.699	Ciona_intestinalis
ENSHBUG00000000027	cnot4a	92	88.321	ENSCANG00000029319	CNOT4	100	88.321	Colobus_angolensis_palliatus
ENSHBUG00000000027	cnot4a	91	90.566	ENSCGRG00001014651	Cnot4	99	90.566	Cricetulus_griseus_chok1gshd
ENSHBUG00000000027	cnot4a	91	90.566	ENSCGRG00000005727	Cnot4	99	90.566	Cricetulus_griseus_crigri
ENSHBUG00000000027	cnot4a	95	100.000	ENSCSEG00000015080	cnot4a	94	100.000	Cynoglossus_semilaevis
ENSHBUG00000000027	cnot4a	100	98.148	ENSCVAG00000009399	cnot4a	100	97.436	Cyprinodon_variegatus
ENSHBUG00000000027	cnot4a	100	92.251	ENSDARG00000007639	cnot4b	92	92.251	Danio_rerio
ENSHBUG00000000027	cnot4a	100	76.894	ENSDARG00000007045	cnot4a	100	77.267	Danio_rerio
ENSHBUG00000000027	cnot4a	92	88.321	ENSDNOG00000009409	CNOT4	100	88.321	Dasypus_novemcinctus
ENSHBUG00000000027	cnot4a	91	90.566	ENSDORG00000012268	Cnot4	99	90.566	Dipodomys_ordii
ENSHBUG00000000027	cnot4a	89	83.212	ENSETEG00000013407	CNOT4	94	83.212	Echinops_telfairi
ENSHBUG00000000027	cnot4a	89	88.321	ENSEASG00005014430	CNOT4	100	88.321	Equus_asinus_asinus
ENSHBUG00000000027	cnot4a	92	88.321	ENSECAG00000020262	CNOT4	100	88.321	Equus_caballus
ENSHBUG00000000027	cnot4a	99	94.545	ENSELUG00000008742	cnot4a	100	95.572	Esox_lucius
ENSHBUG00000000027	cnot4a	95	92.075	ENSELUG00000011540	cnot4b	96	89.455	Esox_lucius
ENSHBUG00000000027	cnot4a	91	90.566	ENSFCAG00000011904	CNOT4	99	90.566	Felis_catus
ENSHBUG00000000027	cnot4a	100	70.320	ENSFALG00000011194	CNOT4	100	69.544	Ficedula_albicollis
ENSHBUG00000000027	cnot4a	91	90.566	ENSFDAG00000013525	CNOT4	99	90.566	Fukomys_damarensis
ENSHBUG00000000027	cnot4a	100	99.259	ENSFHEG00000006608	cnot4a	100	97.482	Fundulus_heteroclitus
ENSHBUG00000000027	cnot4a	96	76.768	ENSGMOG00000001329	cnot4a	100	77.382	Gadus_morhua
ENSHBUG00000000027	cnot4a	92	88.321	ENSGALG00000011682	CNOT4	100	88.321	Gallus_gallus
ENSHBUG00000000027	cnot4a	100	98.889	ENSGACG00000004276	cnot4a	100	98.889	Gasterosteus_aculeatus
ENSHBUG00000000027	cnot4a	91	89.299	ENSGAGG00000017331	CNOT4	99	89.299	Gopherus_agassizii
ENSHBUG00000000027	cnot4a	84	90.047	ENSGGOG00000000142	CNOT4	98	90.047	Gorilla_gorilla
ENSHBUG00000000027	cnot4a	91	90.566	ENSHGLG00000011533	CNOT4	99	90.566	Heterocephalus_glaber_female
ENSHBUG00000000027	cnot4a	69	88.321	ENSHGLG00100013058	CNOT4	94	88.321	Heterocephalus_glaber_male
ENSHBUG00000000027	cnot4a	99	98.148	ENSHCOG00000015815	cnot4a	100	98.148	Hippocampus_comes
ENSHBUG00000000027	cnot4a	100	92.251	ENSIPUG00000016994	cnot4b	100	92.222	Ictalurus_punctatus
ENSHBUG00000000027	cnot4a	100	86.424	ENSIPUG00000006393	cnot4	100	94.444	Ictalurus_punctatus
ENSHBUG00000000027	cnot4a	91	90.566	ENSSTOG00000007717	CNOT4	99	90.566	Ictidomys_tridecemlineatus
ENSHBUG00000000027	cnot4a	68	87.037	ENSJJAG00000019991	-	93	88.302	Jaculus_jaculus
ENSHBUG00000000027	cnot4a	91	90.566	ENSJJAG00000016618	Cnot4	99	90.566	Jaculus_jaculus
ENSHBUG00000000027	cnot4a	94	98.519	ENSKMAG00000004581	cnot4a	100	97.802	Kryptolebias_marmoratus
ENSHBUG00000000027	cnot4a	100	99.259	ENSLBEG00000009999	cnot4a	100	94.236	Labrus_bergylta
ENSHBUG00000000027	cnot4a	100	70.530	ENSLACG00000002647	CNOT4	99	71.319	Latimeria_chalumnae
ENSHBUG00000000027	cnot4a	100	91.575	ENSLOCG00000016126	cnot4a	92	91.575	Lepisosteus_oculatus
ENSHBUG00000000027	cnot4a	92	88.321	ENSLAFG00000000709	CNOT4	100	88.321	Loxodonta_africana
ENSHBUG00000000027	cnot4a	91	90.566	ENSMFAG00000046349	CNOT4	99	90.566	Macaca_fascicularis
ENSHBUG00000000027	cnot4a	92	88.321	ENSMMUG00000016181	CNOT4	100	88.321	Macaca_mulatta
ENSHBUG00000000027	cnot4a	92	88.321	ENSMNEG00000042164	CNOT4	99	90.566	Macaca_nemestrina
ENSHBUG00000000027	cnot4a	92	88.321	ENSMLEG00000032709	CNOT4	100	88.321	Mandrillus_leucophaeus
ENSHBUG00000000027	cnot4a	100	100.000	ENSMAMG00000023194	cnot4a	100	95.489	Mastacembelus_armatus
ENSHBUG00000000027	cnot4a	100	100.000	ENSMZEG00005007312	cnot4a	100	100.000	Maylandia_zebra
ENSHBUG00000000027	cnot4a	100	69.828	ENSMGAG00000011788	CNOT4	100	69.174	Meleagris_gallopavo
ENSHBUG00000000027	cnot4a	91	90.566	ENSMAUG00000020415	Cnot4	99	90.566	Mesocricetus_auratus
ENSHBUG00000000027	cnot4a	92	88.321	ENSMICG00000001667	CNOT4	100	88.321	Microcebus_murinus
ENSHBUG00000000027	cnot4a	91	90.566	ENSMOCG00000020955	Cnot4	99	90.566	Microtus_ochrogaster
ENSHBUG00000000027	cnot4a	89	90.034	ENSMMOG00000014565	cnot4a	95	98.889	Mola_mola
ENSHBUG00000000027	cnot4a	91	90.566	ENSMODG00000014068	CNOT4	99	90.566	Monodelphis_domestica
ENSHBUG00000000027	cnot4a	93	98.889	ENSMALG00000011662	cnot4a	89	93.867	Monopterus_albus
ENSHBUG00000000027	cnot4a	91	90.566	MGP_CAROLIEiJ_G0028217	Cnot4	99	90.566	Mus_caroli
ENSHBUG00000000027	cnot4a	91	90.566	ENSMUSG00000038784	Cnot4	99	90.566	Mus_musculus
ENSHBUG00000000027	cnot4a	91	90.566	MGP_PahariEiJ_G0021974	Cnot4	99	90.566	Mus_pahari
ENSHBUG00000000027	cnot4a	91	90.566	MGP_SPRETEiJ_G0029216	Cnot4	99	90.566	Mus_spretus
ENSHBUG00000000027	cnot4a	91	90.566	ENSMPUG00000004089	CNOT4	99	90.566	Mustela_putorius_furo
ENSHBUG00000000027	cnot4a	89	88.321	ENSMLUG00000008260	CNOT4	100	88.321	Myotis_lucifugus
ENSHBUG00000000027	cnot4a	91	90.566	ENSNGAG00000015030	Cnot4	99	90.566	Nannospalax_galili
ENSHBUG00000000027	cnot4a	100	99.843	ENSNBRG00000021144	cnot4a	100	99.843	Neolamprologus_brichardi
ENSHBUG00000000027	cnot4a	92	87.956	ENSNLEG00000013352	CNOT4	100	87.956	Nomascus_leucogenys
ENSHBUG00000000027	cnot4a	73	98.131	ENSOPRG00000001023	CNOT4	70	98.131	Ochotona_princeps
ENSHBUG00000000027	cnot4a	91	90.566	ENSODEG00000012975	CNOT4	99	90.566	Octodon_degus
ENSHBUG00000000027	cnot4a	100	100.000	ENSONIG00000008656	cnot4a	100	99.875	Oreochromis_niloticus
ENSHBUG00000000027	cnot4a	91	90.566	ENSOANG00000005006	CNOT4	99	90.566	Ornithorhynchus_anatinus
ENSHBUG00000000027	cnot4a	91	90.566	ENSOCUG00000013448	CNOT4	99	90.566	Oryctolagus_cuniculus
ENSHBUG00000000027	cnot4a	100	92.222	ENSORLG00000003727	cnot4a	100	97.436	Oryzias_latipes
ENSHBUG00000000027	cnot4a	100	92.222	ENSORLG00020015684	cnot4a	100	97.436	Oryzias_latipes_hni
ENSHBUG00000000027	cnot4a	100	92.222	ENSORLG00015008470	cnot4a	100	97.436	Oryzias_latipes_hsok
ENSHBUG00000000027	cnot4a	100	91.125	ENSOMEG00000011084	cnot4a	100	97.802	Oryzias_melastigma
ENSHBUG00000000027	cnot4a	92	88.321	ENSOGAG00000015499	CNOT4	100	88.321	Otolemur_garnettii
ENSHBUG00000000027	cnot4a	92	88.321	ENSOARG00000008803	CNOT4	100	88.321	Ovis_aries
ENSHBUG00000000027	cnot4a	92	88.321	ENSPPAG00000041937	CNOT4	100	88.321	Pan_paniscus
ENSHBUG00000000027	cnot4a	92	88.321	ENSPPRG00000023940	CNOT4	100	88.321	Panthera_pardus
ENSHBUG00000000027	cnot4a	91	90.566	ENSPTIG00000016601	CNOT4	99	90.566	Panthera_tigris_altaica
ENSHBUG00000000027	cnot4a	92	88.321	ENSPTRG00000019727	CNOT4	100	88.321	Pan_troglodytes
ENSHBUG00000000027	cnot4a	92	88.321	ENSPANG00000017724	CNOT4	100	88.321	Papio_anubis
ENSHBUG00000000027	cnot4a	100	86.316	ENSPKIG00000018137	cnot4a	93	86.316	Paramormyrops_kingsleyae
ENSHBUG00000000027	cnot4a	100	69.988	ENSPSIG00000011256	CNOT4	100	69.458	Pelodiscus_sinensis
ENSHBUG00000000027	cnot4a	100	89.708	ENSPMGG00000005671	cnot4a	100	97.037	Periophthalmus_magnuspinnatus
ENSHBUG00000000027	cnot4a	91	90.566	ENSPEMG00000021566	Cnot4	99	90.566	Peromyscus_maniculatus_bairdii
ENSHBUG00000000027	cnot4a	91	90.566	ENSPCIG00000029622	CNOT4	95	90.566	Phascolarctos_cinereus
ENSHBUG00000000027	cnot4a	100	99.259	ENSPFOG00000002228	cnot4a	100	92.040	Poecilia_formosa
ENSHBUG00000000027	cnot4a	100	99.259	ENSPLAG00000001780	cnot4a	100	98.535	Poecilia_latipinna
ENSHBUG00000000027	cnot4a	100	99.259	ENSPMEG00000006852	cnot4a	100	98.535	Poecilia_mexicana
ENSHBUG00000000027	cnot4a	100	99.259	ENSPREG00000008171	cnot4a	100	96.043	Poecilia_reticulata
ENSHBUG00000000027	cnot4a	91	90.566	ENSPPYG00000018026	CNOT4	99	90.566	Pongo_abelii
ENSHBUG00000000027	cnot4a	92	88.321	ENSPCOG00000019907	CNOT4	100	88.321	Propithecus_coquereli
ENSHBUG00000000027	cnot4a	86	88.321	ENSPVAG00000004905	CNOT4	90	88.321	Pteropus_vampyrus
ENSHBUG00000000027	cnot4a	100	100.000	ENSPNYG00000004276	cnot4a	100	100.000	Pundamilia_nyererei
ENSHBUG00000000027	cnot4a	100	86.755	ENSPNAG00000020433	cnot4a	100	94.444	Pygocentrus_nattereri
ENSHBUG00000000027	cnot4a	100	92.620	ENSPNAG00000008679	cnot4b	100	92.593	Pygocentrus_nattereri
ENSHBUG00000000027	cnot4a	91	90.566	ENSRNOG00000010795	Cnot4	99	90.566	Rattus_norvegicus
ENSHBUG00000000027	cnot4a	92	88.321	ENSRBIG00000043977	CNOT4	100	88.321	Rhinopithecus_bieti
ENSHBUG00000000027	cnot4a	91	90.566	ENSSBOG00000020808	CNOT4	99	90.566	Saimiri_boliviensis_boliviensis
ENSHBUG00000000027	cnot4a	91	90.566	ENSSHAG00000013639	CNOT4	99	90.566	Sarcophilus_harrisii
ENSHBUG00000000027	cnot4a	100	91.756	ENSSFOG00015017285	CNOT4	100	93.407	Scleropages_formosus
ENSHBUG00000000027	cnot4a	88	91.538	ENSSFOG00015002019	cnot4a	100	91.481	Scleropages_formosus
ENSHBUG00000000027	cnot4a	100	100.000	ENSSMAG00000008614	cnot4a	100	100.000	Scophthalmus_maximus
ENSHBUG00000000027	cnot4a	100	100.000	ENSSDUG00000022635	cnot4a	100	100.000	Seriola_dumerili
ENSHBUG00000000027	cnot4a	81	93.284	ENSSDUG00000018585	cnot4b	99	93.284	Seriola_dumerili
ENSHBUG00000000027	cnot4a	100	61.876	ENSSLDG00000014347	cnot4b	100	62.762	Seriola_lalandi_dorsalis
ENSHBUG00000000027	cnot4a	100	100.000	ENSSLDG00000015770	cnot4a	100	96.366	Seriola_lalandi_dorsalis
ENSHBUG00000000027	cnot4a	89	88.321	ENSSPUG00000004677	CNOT4	100	88.321	Sphenodon_punctatus
ENSHBUG00000000027	cnot4a	100	100.000	ENSSPAG00000012329	cnot4a	100	100.000	Stegastes_partitus
ENSHBUG00000000027	cnot4a	92	88.321	ENSSSCG00000021354	CNOT4	98	90.566	Sus_scrofa
ENSHBUG00000000027	cnot4a	100	70.197	ENSTGUG00000009161	CNOT4	100	69.544	Taeniopygia_guttata
ENSHBUG00000000027	cnot4a	100	98.519	ENSTRUG00000016861	cnot4a	100	98.519	Takifugu_rubripes
ENSHBUG00000000027	cnot4a	100	91.892	ENSTNIG00000016000	cnot4a	99	91.882	Tetraodon_nigroviridis
ENSHBUG00000000027	cnot4a	86	83.942	ENSTBEG00000002202	CNOT4	88	82.847	Tupaia_belangeri
ENSHBUG00000000027	cnot4a	86	88.321	ENSTTRG00000005122	CNOT4	90	88.321	Tursiops_truncatus
ENSHBUG00000000027	cnot4a	89	88.321	ENSUAMG00000026759	CNOT4	100	88.321	Ursus_americanus
ENSHBUG00000000027	cnot4a	91	88.321	ENSUMAG00000015351	CNOT4	95	88.321	Ursus_maritimus
ENSHBUG00000000027	cnot4a	92	88.321	ENSVVUG00000006200	CNOT4	99	90.566	Vulpes_vulpes
ENSHBUG00000000027	cnot4a	96	89.259	ENSXETG00000010594	cnot4	89	89.259	Xenopus_tropicalis
ENSHBUG00000000027	cnot4a	78	98.168	ENSXCOG00000020824	cnot4a	98	98.168	Xiphophorus_couchianus
ENSHBUG00000000027	cnot4a	100	98.519	ENSXMAG00000016984	cnot4a	100	97.802	Xiphophorus_maculatus