EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000000393 (Gene tree)
Gene ID: 102305400
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 61189 bases
Position: chrJH425441.1:819514-880702
Accession: 102305400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	1	6
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	2	6
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	3	6
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	4	6
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	5	6
ENSHBUP00000029133	PPR	PF01535.20	9.9e-34	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000032218	-	5882	XM_005930561	ENSHBUP00000029133	1457 (aa)	XP_005930623	UPI0003BD0943

Gene Model

Click here to download ENSHBUG00000000393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000000393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000000393	lrpprc	98	80.659	ENSAPOG00000016610	lrpprc	100	80.659	Acanthochromis_polyacanthus
ENSHBUG00000000393	lrpprc	94	52.309	ENSAMEG00000005852	LRPPRC	99	52.309	Ailuropoda_melanoleuca
ENSHBUG00000000393	lrpprc	98	83.508	ENSACIG00000009604	lrpprc	100	83.508	Amphilophus_citrinellus
ENSHBUG00000000393	lrpprc	98	81.329	ENSAOCG00000005886	lrpprc	100	81.329	Amphiprion_ocellaris
ENSHBUG00000000393	lrpprc	98	76.699	ENSAPEG00000002937	lrpprc	99	76.699	Amphiprion_percula
ENSHBUG00000000393	lrpprc	98	74.364	ENSATEG00000010555	lrpprc	98	74.364	Anabas_testudineus
ENSHBUG00000000393	lrpprc	93	57.269	ENSACAG00000029278	LRPPRC	97	56.821	Anolis_carolinensis
ENSHBUG00000000393	lrpprc	97	51.189	ENSANAG00000027440	LRPPRC	97	55.019	Aotus_nancymaae
ENSHBUG00000000393	lrpprc	94	87.137	ENSACLG00000023712	lrpprc	99	87.137	Astatotilapia_calliptera
ENSHBUG00000000393	lrpprc	93	51.982	ENSCJAG00000000794	LRPPRC	96	52.056	Callithrix_jacchus
ENSHBUG00000000393	lrpprc	95	52.296	ENSCHIG00000020173	LRPPRC	99	51.787	Capra_hircus
ENSHBUG00000000393	lrpprc	91	42.012	ENSCAPG00000013631	LRPPRC	97	42.160	Cavia_aperea
ENSHBUG00000000393	lrpprc	83	51.024	ENSCPOG00000000204	LRPPRC	99	51.024	Cavia_porcellus
ENSHBUG00000000393	lrpprc	97	50.733	ENSCCAG00000031900	LRPPRC	97	54.898	Cebus_capucinus
ENSHBUG00000000393	lrpprc	94	51.876	ENSCATG00000014187	LRPPRC	92	57.520	Cercocebus_atys
ENSHBUG00000000393	lrpprc	91	51.880	ENSCLAG00000005203	LRPPRC	94	51.880	Chinchilla_lanigera
ENSHBUG00000000393	lrpprc	94	52.205	ENSCSAG00000013233	LRPPRC	98	52.130	Chlorocebus_sabaeus
ENSHBUG00000000393	lrpprc	82	50.773	ENSCHOG00000003631	LRPPRC	84	50.773	Choloepus_hoffmanni
ENSHBUG00000000393	lrpprc	93	50.552	ENSCANG00000034961	LRPPRC	99	70.614	Colobus_angolensis_palliatus
ENSHBUG00000000393	lrpprc	97	50.492	ENSCGRG00001016261	Lrpprc	99	50.667	Cricetulus_griseus_chok1gshd
ENSHBUG00000000393	lrpprc	97	50.492	ENSCGRG00000004072	Lrpprc	99	50.667	Cricetulus_griseus_crigri
ENSHBUG00000000393	lrpprc	99	53.465	ENSCSEG00000003850	lrpprc	96	60.234	Cynoglossus_semilaevis
ENSHBUG00000000393	lrpprc	98	80.140	ENSCVAG00000012967	lrpprc	100	80.140	Cyprinodon_variegatus
ENSHBUG00000000393	lrpprc	98	59.653	ENSDARG00000043970	lrpprc	98	59.653	Danio_rerio
ENSHBUG00000000393	lrpprc	77	41.519	ENSDNOG00000032336	-	97	41.519	Dasypus_novemcinctus
ENSHBUG00000000393	lrpprc	97	51.261	ENSDNOG00000012594	-	99	51.261	Dasypus_novemcinctus
ENSHBUG00000000393	lrpprc	93	52.670	ENSDORG00000012233	Lrpprc	99	51.437	Dipodomys_ordii
ENSHBUG00000000393	lrpprc	92	52.476	ENSETEG00000006657	LRPPRC	99	51.264	Echinops_telfairi
ENSHBUG00000000393	lrpprc	71	54.975	ENSEEUG00000012340	LRPPRC	80	54.975	Erinaceus_europaeus
ENSHBUG00000000393	lrpprc	93	60.221	ENSELUG00000012803	lrpprc	99	60.221	Esox_lucius
ENSHBUG00000000393	lrpprc	97	52.495	ENSFCAG00000013468	LRPPRC	99	52.669	Felis_catus
ENSHBUG00000000393	lrpprc	92	50.669	ENSFALG00000012738	LRPPRC	99	50.669	Ficedula_albicollis
ENSHBUG00000000393	lrpprc	97	49.756	ENSFDAG00000015328	LRPPRC	99	49.756	Fukomys_damarensis
ENSHBUG00000000393	lrpprc	98	78.596	ENSFHEG00000019604	lrpprc	100	78.596	Fundulus_heteroclitus
ENSHBUG00000000393	lrpprc	97	64.473	ENSGMOG00000008337	lrpprc	99	64.473	Gadus_morhua
ENSHBUG00000000393	lrpprc	98	76.247	ENSGAFG00000001455	lrpprc	100	76.247	Gambusia_affinis
ENSHBUG00000000393	lrpprc	98	73.773	ENSGACG00000010679	lrpprc	100	76.753	Gasterosteus_aculeatus
ENSHBUG00000000393	lrpprc	97	49.235	ENSHGLG00000006123	LRPPRC	99	49.235	Heterocephalus_glaber_female
ENSHBUG00000000393	lrpprc	58	48.521	ENSHGLG00100005960	-	99	48.521	Heterocephalus_glaber_male
ENSHBUG00000000393	lrpprc	95	73.882	ENSHCOG00000002107	lrpprc	100	73.882	Hippocampus_comes
ENSHBUG00000000393	lrpprc	98	64.400	ENSIPUG00000009406	lrpprc	99	64.400	Ictalurus_punctatus
ENSHBUG00000000393	lrpprc	97	50.983	ENSSTOG00000011185	LRPPRC	99	51.053	Ictidomys_tridecemlineatus
ENSHBUG00000000393	lrpprc	94	51.381	ENSJJAG00000020475	Lrpprc	100	50.562	Jaculus_jaculus
ENSHBUG00000000393	lrpprc	96	66.003	ENSKMAG00000003287	lrpprc	85	66.003	Kryptolebias_marmoratus
ENSHBUG00000000393	lrpprc	98	65.852	ENSLBEG00000023225	lrpprc	98	71.970	Labrus_bergylta
ENSHBUG00000000393	lrpprc	97	59.777	ENSLACG00000014030	LRPPRC	99	59.777	Latimeria_chalumnae
ENSHBUG00000000393	lrpprc	96	62.911	ENSLOCG00000016390	lrpprc	97	62.911	Lepisosteus_oculatus
ENSHBUG00000000393	lrpprc	97	49.372	ENSLAFG00000008614	LRPPRC	99	49.372	Loxodonta_africana
ENSHBUG00000000393	lrpprc	94	51.876	ENSMFAG00000041560	LRPPRC	99	54.925	Macaca_fascicularis
ENSHBUG00000000393	lrpprc	94	51.082	ENSMMUG00000019841	LRPPRC	99	54.491	Macaca_mulatta
ENSHBUG00000000393	lrpprc	94	51.948	ENSMNEG00000031613	LRPPRC	100	51.043	Macaca_nemestrina
ENSHBUG00000000393	lrpprc	96	66.524	ENSMAMG00000021835	lrpprc	98	66.856	Mastacembelus_armatus
ENSHBUG00000000393	lrpprc	98	98.952	ENSMZEG00005027379	lrpprc	100	98.952	Maylandia_zebra
ENSHBUG00000000393	lrpprc	97	50.387	ENSMAUG00000012118	Lrpprc	99	51.293	Mesocricetus_auratus
ENSHBUG00000000393	lrpprc	97	51.541	ENSMICG00000010486	LRPPRC	98	55.083	Microcebus_murinus
ENSHBUG00000000393	lrpprc	97	50.914	ENSMOCG00000006048	Lrpprc	99	50.914	Microtus_ochrogaster
ENSHBUG00000000393	lrpprc	98	71.579	ENSMMOG00000007830	lrpprc	94	78.669	Mola_mola
ENSHBUG00000000393	lrpprc	91	52.902	ENSMODG00000000648	LRPPRC	98	52.902	Monodelphis_domestica
ENSHBUG00000000393	lrpprc	98	72.715	ENSMALG00000001271	lrpprc	100	72.715	Monopterus_albus
ENSHBUG00000000393	lrpprc	91	55.382	ENSMPUG00000011800	LRPPRC	99	53.708	Mustela_putorius_furo
ENSHBUG00000000393	lrpprc	92	52.954	ENSMLUG00000010575	LRPPRC	95	52.954	Myotis_lucifugus
ENSHBUG00000000393	lrpprc	97	51.304	ENSNGAG00000013069	Lrpprc	99	51.304	Nannospalax_galili
ENSHBUG00000000393	lrpprc	92	85.202	ENSNBRG00000013202	lrpprc	100	85.351	Neolamprologus_brichardi
ENSHBUG00000000393	lrpprc	97	49.965	ENSNLEG00000016782	LRPPRC	99	53.358	Nomascus_leucogenys
ENSHBUG00000000393	lrpprc	85	53.333	ENSOPRG00000016774	LRPPRC	92	47.069	Ochotona_princeps
ENSHBUG00000000393	lrpprc	92	52.222	ENSODEG00000011211	LRPPRC	95	52.222	Octodon_degus
ENSHBUG00000000393	lrpprc	99	97.039	ENSONIG00000000917	lrpprc	99	97.039	Oreochromis_niloticus
ENSHBUG00000000393	lrpprc	74	48.020	ENSOANG00000014670	-	100	47.826	Ornithorhynchus_anatinus
ENSHBUG00000000393	lrpprc	99	51.377	ENSOCUG00000015046	LRPPRC	97	51.515	Oryctolagus_cuniculus
ENSHBUG00000000393	lrpprc	99	73.213	ENSORLG00000004605	lrpprc	97	73.421	Oryzias_latipes
ENSHBUG00000000393	lrpprc	89	77.709	ENSORLG00020012536	lrpprc	99	77.468	Oryzias_latipes_hni
ENSHBUG00000000393	lrpprc	98	71.208	ENSORLG00015018270	lrpprc	100	71.278	Oryzias_latipes_hsok
ENSHBUG00000000393	lrpprc	93	52.509	ENSOGAG00000012798	LRPPRC	99	51.969	Otolemur_garnettii
ENSHBUG00000000393	lrpprc	92	53.289	ENSOARG00000006522	LRPPRC	99	51.787	Ovis_aries
ENSHBUG00000000393	lrpprc	97	49.093	ENSPPAG00000040876	LRPPRC	97	53.962	Pan_paniscus
ENSHBUG00000000393	lrpprc	97	52.214	ENSPPRG00000006578	LRPPRC	99	52.421	Panthera_pardus
ENSHBUG00000000393	lrpprc	92	53.880	ENSPTIG00000000933	LRPPRC	96	53.880	Panthera_tigris_altaica
ENSHBUG00000000393	lrpprc	97	50.281	ENSPTRG00000011880	LRPPRC	97	53.846	Pan_troglodytes
ENSHBUG00000000393	lrpprc	94	51.587	ENSPANG00000020731	LRPPRC	92	57.317	Papio_anubis
ENSHBUG00000000393	lrpprc	93	50.110	ENSPKIG00000022232	lrpprc	97	58.398	Paramormyrops_kingsleyae
ENSHBUG00000000393	lrpprc	60	55.176	ENSPSIG00000006830	-	99	55.973	Pelodiscus_sinensis
ENSHBUG00000000393	lrpprc	66	64.182	ENSPMGG00000016597	lrpprc	99	64.182	Periophthalmus_magnuspinnatus
ENSHBUG00000000393	lrpprc	91	46.852	ENSPMAG00000002147	lrpprc	100	46.852	Petromyzon_marinus
ENSHBUG00000000393	lrpprc	98	75.685	ENSPFOG00000011227	lrpprc	100	75.685	Poecilia_formosa
ENSHBUG00000000393	lrpprc	98	75.826	ENSPLAG00000004018	lrpprc	100	75.826	Poecilia_latipinna
ENSHBUG00000000393	lrpprc	98	75.615	ENSPMEG00000016425	lrpprc	100	75.615	Poecilia_mexicana
ENSHBUG00000000393	lrpprc	97	75.655	ENSPREG00000003662	lrpprc	99	75.655	Poecilia_reticulata
ENSHBUG00000000393	lrpprc	56	48.348	ENSPPYG00000029532	-	100	48.348	Pongo_abelii
ENSHBUG00000000393	lrpprc	76	54.749	ENSPCAG00000001430	LRPPRC	80	54.679	Procavia_capensis
ENSHBUG00000000393	lrpprc	97	50.141	ENSPVAG00000002007	LRPPRC	99	50.141	Pteropus_vampyrus
ENSHBUG00000000393	lrpprc	98	82.903	ENSPNYG00000000756	lrpprc	100	82.903	Pundamilia_nyererei
ENSHBUG00000000393	lrpprc	98	66.295	ENSPNAG00000002895	lrpprc	99	66.295	Pygocentrus_nattereri
ENSHBUG00000000393	lrpprc	92	51.405	ENSRNOG00000005877	Lrpprc	99	50.105	Rattus_norvegicus
ENSHBUG00000000393	lrpprc	97	49.791	ENSRBIG00000031552	LRPPRC	100	49.896	Rhinopithecus_bieti
ENSHBUG00000000393	lrpprc	97	50.559	ENSSBOG00000011807	LRPPRC	97	54.461	Saimiri_boliviensis_boliviensis
ENSHBUG00000000393	lrpprc	91	52.353	ENSSHAG00000018725	LRPPRC	98	52.353	Sarcophilus_harrisii
ENSHBUG00000000393	lrpprc	98	57.605	ENSSFOG00015001042	lrpprc	99	57.605	Scleropages_formosus
ENSHBUG00000000393	lrpprc	98	76.430	ENSSDUG00000019062	lrpprc	100	76.430	Seriola_dumerili
ENSHBUG00000000393	lrpprc	98	58.062	ENSSLDG00000023028	lrpprc	100	58.270	Seriola_lalandi_dorsalis
ENSHBUG00000000393	lrpprc	88	49.715	ENSSARG00000000426	LRPPRC	99	49.715	Sorex_araneus
ENSHBUG00000000393	lrpprc	98	68.330	ENSSPAG00000000162	lrpprc	100	68.399	Stegastes_partitus
ENSHBUG00000000393	lrpprc	97	51.225	ENSSSCG00000008452	LRPPRC	99	51.225	Sus_scrofa
ENSHBUG00000000393	lrpprc	91	49.250	ENSTGUG00000003759	LRPPRC	100	49.250	Taeniopygia_guttata
ENSHBUG00000000393	lrpprc	98	73.620	ENSTRUG00000008409	lrpprc	97	73.620	Takifugu_rubripes
ENSHBUG00000000393	lrpprc	97	71.138	ENSTNIG00000007470	lrpprc	100	72.875	Tetraodon_nigroviridis
ENSHBUG00000000393	lrpprc	92	51.589	ENSTTRG00000006403	LRPPRC	99	50.281	Tursiops_truncatus
ENSHBUG00000000393	lrpprc	92	49.557	ENSVPAG00000008993	LRPPRC	99	49.557	Vicugna_pacos
ENSHBUG00000000393	lrpprc	93	58.954	ENSXETG00000009296	lrpprc	97	59.027	Xenopus_tropicalis
ENSHBUG00000000393	lrpprc	96	69.559	ENSXCOG00000013343	lrpprc	97	70.441	Xiphophorus_couchianus
ENSHBUG00000000393	lrpprc	98	76.037	ENSXMAG00000018108	lrpprc	100	76.037	Xiphophorus_maculatus