EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000000726 (Gene tree)
Gene ID: 102313688
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 20287 bases
Position: chrJH425522.1:131967-152253
Accession: 102313688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000035506	rRNA_proc-arch	PF13234.6	1.6e-30	1	1
ENSHBUP00000021375	rRNA_proc-arch	PF13234.6	9e-24	1	1
ENSHBUP00000021375	DEAD	PF00270.29	2.6e-16	1	1
ENSHBUP00000035506	DEAD	PF00270.29	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031250	-	5612	XM_005936258	ENSHBUP00000035506	1242 (aa)	XP_005936320	UPI0003BD28F0
ENSHBUT00000031209	-	3522	-	ENSHBUP00000021375	1173 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000000726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000000726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000000726	skiv2l	77	35.843	ENSHBUG00000006229	mtrex	89	35.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000000726	skiv2l	99	61.606	ENSG00000204351	SKIV2L	99	61.490	Homo_sapiens
ENSHBUG00000000726	skiv2l	100	90.434	ENSAPOG00000008257	skiv2l	100	90.434	Acanthochromis_polyacanthus
ENSHBUG00000000726	skiv2l	99	61.303	ENSAMEG00000002078	SKIV2L	99	61.429	Ailuropoda_melanoleuca
ENSHBUG00000000726	skiv2l	99	92.295	ENSACIG00000016719	skiv2l	100	92.133	Amphilophus_citrinellus
ENSHBUG00000000726	skiv2l	100	91.158	ENSAOCG00000017352	skiv2l	100	91.158	Amphiprion_ocellaris
ENSHBUG00000000726	skiv2l	100	90.916	ENSAPEG00000001055	skiv2l	100	90.916	Amphiprion_percula
ENSHBUG00000000726	skiv2l	100	90.836	ENSATEG00000007601	skiv2l	100	90.916	Anabas_testudineus
ENSHBUG00000000726	skiv2l	100	63.154	ENSACAG00000011746	SKIV2L	99	63.445	Anolis_carolinensis
ENSHBUG00000000726	skiv2l	99	61.866	ENSANAG00000037992	SKIV2L	99	61.727	Aotus_nancymaae
ENSHBUG00000000726	skiv2l	100	99.597	ENSACLG00000006886	skiv2l	100	99.597	Astatotilapia_calliptera
ENSHBUG00000000726	skiv2l	100	82.546	ENSAMXG00000011517	skiv2l	100	82.546	Astyanax_mexicanus
ENSHBUG00000000726	skiv2l	99	61.205	ENSBTAG00000005587	SKIV2L	99	61.252	Bos_taurus
ENSHBUG00000000726	skiv2l	95	41.473	WBGene00008502	skih-2	99	41.163	Caenorhabditis_elegans
ENSHBUG00000000726	skiv2l	99	61.817	ENSCJAG00000002263	SKIV2L	99	61.508	Callithrix_jacchus
ENSHBUG00000000726	skiv2l	99	61.138	ENSCAFG00000000679	SKIV2L	99	61.190	Canis_familiaris
ENSHBUG00000000726	skiv2l	99	61.138	ENSCAFG00020000948	SKIV2L	99	61.190	Canis_lupus_dingo
ENSHBUG00000000726	skiv2l	99	61.526	ENSCHIG00000012897	SKIV2L	99	61.569	Capra_hircus
ENSHBUG00000000726	skiv2l	99	61.303	ENSTSYG00000012133	SKIV2L	99	61.173	Carlito_syrichta
ENSHBUG00000000726	skiv2l	99	61.066	ENSCPOG00000001307	SKIV2L	99	60.956	Cavia_porcellus
ENSHBUG00000000726	skiv2l	99	61.706	ENSCCAG00000026206	SKIV2L	99	61.569	Cebus_capucinus
ENSHBUG00000000726	skiv2l	99	61.464	ENSCATG00000036901	SKIV2L	99	61.270	Cercocebus_atys
ENSHBUG00000000726	skiv2l	99	61.223	ENSCLAG00000007678	SKIV2L	99	61.173	Chinchilla_lanigera
ENSHBUG00000000726	skiv2l	99	61.786	ENSCSAG00000008988	SKIV2L	99	61.508	Chlorocebus_sabaeus
ENSHBUG00000000726	skiv2l	88	61.276	ENSCPBG00000000343	SKIV2L	99	58.754	Chrysemys_picta_bellii
ENSHBUG00000000726	skiv2l	93	51.245	ENSCING00000005576	-	99	51.024	Ciona_intestinalis
ENSHBUG00000000726	skiv2l	99	61.706	ENSCANG00000039709	SKIV2L	100	60.859	Colobus_angolensis_palliatus
ENSHBUG00000000726	skiv2l	99	61.649	ENSCGRG00001008385	Skiv2l	99	61.441	Cricetulus_griseus_chok1gshd
ENSHBUG00000000726	skiv2l	99	86.715	ENSCSEG00000011326	skiv2l	99	86.795	Cynoglossus_semilaevis
ENSHBUG00000000726	skiv2l	100	89.968	ENSCVAG00000003072	skiv2l	100	89.879	Cyprinodon_variegatus
ENSHBUG00000000726	skiv2l	100	83.920	ENSDARG00000062206	skiv2l	100	83.920	Danio_rerio
ENSHBUG00000000726	skiv2l	92	65.508	ENSDNOG00000037590	SKIV2L	99	58.399	Dasypus_novemcinctus
ENSHBUG00000000726	skiv2l	94	45.493	FBgn0039117	tst	97	45.837	Drosophila_melanogaster
ENSHBUG00000000726	skiv2l	69	79.167	ENSETEG00000009522	SKIV2L	68	79.167	Echinops_telfairi
ENSHBUG00000000726	skiv2l	90	55.584	ENSEBUG00000013680	-	98	54.662	Eptatretus_burgeri
ENSHBUG00000000726	skiv2l	93	62.234	ENSEASG00005015534	SKIV2L	100	62.575	Equus_asinus_asinus
ENSHBUG00000000726	skiv2l	93	61.578	ENSECAG00000021823	SKIV2L	95	61.789	Equus_caballus
ENSHBUG00000000726	skiv2l	53	74.704	ENSEEUG00000005049	SKIV2L	57	74.704	Erinaceus_europaeus
ENSHBUG00000000726	skiv2l	100	84.548	ENSELUG00000000181	skiv2l	100	84.388	Esox_lucius
ENSHBUG00000000726	skiv2l	99	61.365	ENSFCAG00000004519	SKIV2L	99	61.508	Felis_catus
ENSHBUG00000000726	skiv2l	99	60.209	ENSFDAG00000009438	SKIV2L	99	60.270	Fukomys_damarensis
ENSHBUG00000000726	skiv2l	100	89.406	ENSFHEG00000008853	skiv2l	100	89.165	Fundulus_heteroclitus
ENSHBUG00000000726	skiv2l	99	81.643	ENSGMOG00000005926	skiv2l	99	81.643	Gadus_morhua
ENSHBUG00000000726	skiv2l	78	56.830	ENSGALG00000035499	SKIV2L	98	57.231	Gallus_gallus
ENSHBUG00000000726	skiv2l	100	90.048	ENSGAFG00000002382	skiv2l	100	90.048	Gambusia_affinis
ENSHBUG00000000726	skiv2l	100	88.729	ENSGACG00000002927	skiv2l	99	88.729	Gasterosteus_aculeatus
ENSHBUG00000000726	skiv2l	99	61.786	ENSGGOG00000002270	SKIV2L	99	61.648	Gorilla_gorilla
ENSHBUG00000000726	skiv2l	99	61.285	ENSHGLG00000016596	SKIV2L	99	61.252	Heterocephalus_glaber_female
ENSHBUG00000000726	skiv2l	99	59.759	ENSHGLG00100014161	SKIV2L	99	59.746	Heterocephalus_glaber_male
ENSHBUG00000000726	skiv2l	98	82.025	ENSHCOG00000007191	skiv2l	100	82.271	Hippocampus_comes
ENSHBUG00000000726	skiv2l	100	81.529	ENSIPUG00000016263	skiv2l	100	82.669	Ictalurus_punctatus
ENSHBUG00000000726	skiv2l	99	61.094	ENSSTOG00000014596	SKIV2L	99	61.410	Ictidomys_tridecemlineatus
ENSHBUG00000000726	skiv2l	56	64.041	ENSLACG00000002986	-	60	64.041	Latimeria_chalumnae
ENSHBUG00000000726	skiv2l	99	61.415	ENSLAFG00000014231	SKIV2L	99	61.234	Loxodonta_africana
ENSHBUG00000000726	skiv2l	99	61.706	ENSMFAG00000034235	SKIV2L	99	61.508	Macaca_fascicularis
ENSHBUG00000000726	skiv2l	99	61.706	ENSMMUG00000000736	SKIV2L	99	61.508	Macaca_mulatta
ENSHBUG00000000726	skiv2l	99	61.706	ENSMNEG00000044474	SKIV2L	99	61.667	Macaca_nemestrina
ENSHBUG00000000726	skiv2l	99	61.464	ENSMLEG00000030512	SKIV2L	99	61.270	Mandrillus_leucophaeus
ENSHBUG00000000726	skiv2l	100	90.369	ENSMAMG00000002927	skiv2l	100	90.369	Mastacembelus_armatus
ENSHBUG00000000726	skiv2l	100	99.678	ENSMZEG00005026415	skiv2l	100	99.678	Maylandia_zebra
ENSHBUG00000000726	skiv2l	61	69.600	ENSMGAG00000001320	SKIV2L	95	49.571	Meleagris_gallopavo
ENSHBUG00000000726	skiv2l	99	61.218	ENSMAUG00000018613	Skiv2l	99	61.014	Mesocricetus_auratus
ENSHBUG00000000726	skiv2l	99	61.606	ENSMICG00000046331	SKIV2L	99	61.727	Microcebus_murinus
ENSHBUG00000000726	skiv2l	99	60.273	ENSMOCG00000014240	Skiv2l	99	60.286	Microtus_ochrogaster
ENSHBUG00000000726	skiv2l	99	85.737	ENSMMOG00000014547	skiv2l	99	85.737	Mola_mola
ENSHBUG00000000726	skiv2l	99	61.410	ENSMODG00000015052	SKIV2L	99	62.044	Monodelphis_domestica
ENSHBUG00000000726	skiv2l	99	84.013	ENSMALG00000010535	skiv2l	99	84.013	Monopterus_albus
ENSHBUG00000000726	skiv2l	99	62.047	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.526	Mus_caroli
ENSHBUG00000000726	skiv2l	99	61.805	ENSMUSG00000040356	Skiv2l	99	61.526	Mus_musculus
ENSHBUG00000000726	skiv2l	99	61.966	MGP_PahariEiJ_G0020472	Skiv2l	99	61.765	Mus_pahari
ENSHBUG00000000726	skiv2l	99	61.644	MGP_SPRETEiJ_G0022382	Skiv2l	99	61.367	Mus_spretus
ENSHBUG00000000726	skiv2l	99	61.026	ENSMPUG00000010567	SKIV2L	99	61.252	Mustela_putorius_furo
ENSHBUG00000000726	skiv2l	99	61.223	ENSMLUG00000000628	SKIV2L	99	61.032	Myotis_lucifugus
ENSHBUG00000000726	skiv2l	99	94.346	ENSNBRG00000018650	skiv2l	99	94.346	Neolamprologus_brichardi
ENSHBUG00000000726	skiv2l	99	61.035	ENSNLEG00000006451	SKIV2L	100	60.863	Nomascus_leucogenys
ENSHBUG00000000726	skiv2l	79	64.286	ENSMEUG00000006072	SKIV2L	78	63.717	Notamacropus_eugenii
ENSHBUG00000000726	skiv2l	99	60.817	ENSOPRG00000003972	SKIV2L	99	60.949	Ochotona_princeps
ENSHBUG00000000726	skiv2l	99	61.174	ENSODEG00000017516	SKIV2L	99	61.063	Octodon_degus
ENSHBUG00000000726	skiv2l	100	98.392	ENSONIG00000013500	skiv2l	100	98.392	Oreochromis_niloticus
ENSHBUG00000000726	skiv2l	99	61.786	ENSOCUG00000007019	SKIV2L	99	61.667	Oryctolagus_cuniculus
ENSHBUG00000000726	skiv2l	100	88.604	ENSORLG00000002021	skiv2l	100	88.684	Oryzias_latipes
ENSHBUG00000000726	skiv2l	100	88.443	ENSORLG00020009462	skiv2l	100	88.523	Oryzias_latipes_hni
ENSHBUG00000000726	skiv2l	100	88.363	ENSORLG00015016750	skiv2l	100	88.443	Oryzias_latipes_hsok
ENSHBUG00000000726	skiv2l	100	88.987	ENSOMEG00000008531	skiv2l	100	88.987	Oryzias_melastigma
ENSHBUG00000000726	skiv2l	99	61.736	ENSOGAG00000009578	SKIV2L	99	61.429	Otolemur_garnettii
ENSHBUG00000000726	skiv2l	99	58.065	ENSOARG00000002411	-	99	58.152	Ovis_aries
ENSHBUG00000000726	skiv2l	99	61.280	ENSPPAG00000040211	SKIV2L	100	61.186	Pan_paniscus
ENSHBUG00000000726	skiv2l	99	61.625	ENSPPRG00000005017	SKIV2L	99	61.587	Panthera_pardus
ENSHBUG00000000726	skiv2l	99	61.223	ENSPTIG00000021656	SKIV2L	99	61.190	Panthera_tigris_altaica
ENSHBUG00000000726	skiv2l	99	61.706	ENSPTRG00000017997	SKIV2L	99	61.569	Pan_troglodytes
ENSHBUG00000000726	skiv2l	99	60.608	ENSPANG00000011501	SKIV2L	100	60.460	Papio_anubis
ENSHBUG00000000726	skiv2l	100	78.918	ENSPKIG00000011876	skiv2l	100	78.918	Paramormyrops_kingsleyae
ENSHBUG00000000726	skiv2l	99	87.006	ENSPMGG00000019707	skiv2l	99	87.006	Periophthalmus_magnuspinnatus
ENSHBUG00000000726	skiv2l	99	61.241	ENSPEMG00000019001	Skiv2l	99	61.208	Peromyscus_maniculatus_bairdii
ENSHBUG00000000726	skiv2l	99	61.520	ENSPCIG00000018792	SKIV2L	99	61.837	Phascolarctos_cinereus
ENSHBUG00000000726	skiv2l	100	89.647	ENSPFOG00000002424	skiv2l	100	89.647	Poecilia_formosa
ENSHBUG00000000726	skiv2l	100	89.486	ENSPLAG00000018304	skiv2l	100	89.486	Poecilia_latipinna
ENSHBUG00000000726	skiv2l	100	89.807	ENSPMEG00000006997	skiv2l	100	89.807	Poecilia_mexicana
ENSHBUG00000000726	skiv2l	99	84.705	ENSPREG00000002277	skiv2l	99	84.551	Poecilia_reticulata
ENSHBUG00000000726	skiv2l	99	61.303	ENSPPYG00000016472	SKIV2L	99	61.173	Pongo_abelii
ENSHBUG00000000726	skiv2l	77	62.745	ENSPCAG00000004178	SKIV2L	77	62.745	Procavia_capensis
ENSHBUG00000000726	skiv2l	99	61.767	ENSPCOG00000010308	SKIV2L	99	61.807	Propithecus_coquereli
ENSHBUG00000000726	skiv2l	99	61.866	ENSPVAG00000005136	SKIV2L	99	61.697	Pteropus_vampyrus
ENSHBUG00000000726	skiv2l	95	96.917	ENSPNYG00000017853	skiv2l	99	96.917	Pundamilia_nyererei
ENSHBUG00000000726	skiv2l	99	84.228	ENSPNAG00000011823	skiv2l	100	83.949	Pygocentrus_nattereri
ENSHBUG00000000726	skiv2l	99	62.208	ENSRNOG00000000421	Skiv2l	99	61.765	Rattus_norvegicus
ENSHBUG00000000726	skiv2l	99	60.432	ENSRBIG00000035485	SKIV2L	99	60.285	Rhinopithecus_bieti
ENSHBUG00000000726	skiv2l	99	61.625	ENSRROG00000036429	SKIV2L	99	61.429	Rhinopithecus_roxellana
ENSHBUG00000000726	skiv2l	93	38.567	YLR398C	-	93	38.264	Saccharomyces_cerevisiae
ENSHBUG00000000726	skiv2l	99	61.847	ENSSBOG00000027920	SKIV2L	99	61.727	Saimiri_boliviensis_boliviensis
ENSHBUG00000000726	skiv2l	99	61.270	ENSSHAG00000008963	SKIV2L	99	60.777	Sarcophilus_harrisii
ENSHBUG00000000726	skiv2l	100	81.659	ENSSFOG00015016930	skiv2l	100	81.484	Scleropages_formosus
ENSHBUG00000000726	skiv2l	100	89.727	ENSSMAG00000020185	skiv2l	100	89.798	Scophthalmus_maximus
ENSHBUG00000000726	skiv2l	100	90.361	ENSSDUG00000019977	skiv2l	100	90.361	Seriola_dumerili
ENSHBUG00000000726	skiv2l	99	84.815	ENSSLDG00000024382	skiv2l	99	84.907	Seriola_lalandi_dorsalis
ENSHBUG00000000726	skiv2l	99	60.217	ENSSPUG00000012945	SKIV2L	99	60.062	Sphenodon_punctatus
ENSHBUG00000000726	skiv2l	95	91.102	ENSSPAG00000012904	skiv2l	99	91.102	Stegastes_partitus
ENSHBUG00000000726	skiv2l	99	61.429	ENSSSCG00000001424	SKIV2L	100	60.611	Sus_scrofa
ENSHBUG00000000726	skiv2l	73	86.631	ENSTRUG00000000966	skiv2l	100	70.489	Takifugu_rubripes
ENSHBUG00000000726	skiv2l	100	85.176	ENSTNIG00000004382	skiv2l	99	85.256	Tetraodon_nigroviridis
ENSHBUG00000000726	skiv2l	93	63.436	ENSTBEG00000003462	SKIV2L	94	63.436	Tupaia_belangeri
ENSHBUG00000000726	skiv2l	99	57.361	ENSTTRG00000005931	SKIV2L	99	57.448	Tursiops_truncatus
ENSHBUG00000000726	skiv2l	99	61.464	ENSUAMG00000024336	SKIV2L	99	61.569	Ursus_americanus
ENSHBUG00000000726	skiv2l	93	62.169	ENSUMAG00000012666	SKIV2L	100	62.425	Ursus_maritimus
ENSHBUG00000000726	skiv2l	99	61.058	ENSVVUG00000022807	SKIV2L	99	61.146	Vulpes_vulpes
ENSHBUG00000000726	skiv2l	99	58.591	ENSXETG00000010932	skiv2l	99	58.353	Xenopus_tropicalis
ENSHBUG00000000726	skiv2l	99	88.245	ENSXCOG00000019517	skiv2l	97	88.245	Xiphophorus_couchianus
ENSHBUG00000000726	skiv2l	100	89.558	ENSXMAG00000014079	skiv2l	100	89.398	Xiphophorus_maculatus