EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000000776 (Gene tree)
Gene ID: 102313071
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5985 bases
Position: chrJH425458.1:230433-236417
Accession: 102313071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000020177	Nucleoplasmin	PF03066.15	2.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000035818	-	2302	XM_005931911	ENSHBUP00000020177	315 (aa)	XP_005931973	UPI0003BD4AA1

Gene Model

Click here to download ENSHBUG00000000776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000000776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000000776	npm1a	100	77.215	ENSAPOG00000002813	npm1a	99	77.215	Acanthochromis_polyacanthus
ENSHBUG00000000776	npm1a	95	82.724	ENSACIG00000014201	npm1a	100	82.724	Amphilophus_citrinellus
ENSHBUG00000000776	npm1a	90	67.719	ENSAOCG00000004978	npm1a	100	64.912	Amphiprion_ocellaris
ENSHBUG00000000776	npm1a	100	76.582	ENSAPEG00000008594	npm1a	99	77.532	Amphiprion_percula
ENSHBUG00000000776	npm1a	99	77.070	ENSATEG00000008885	npm1a	99	78.025	Anabas_testudineus
ENSHBUG00000000776	npm1a	97	81.107	ENSACLG00000008376	npm1a	96	81.107	Astatotilapia_calliptera
ENSHBUG00000000776	npm1a	98	54.194	ENSAMXG00000010155	npm1a	98	56.913	Astyanax_mexicanus
ENSHBUG00000000776	npm1a	100	58.861	ENSCSEG00000011165	npm1a	93	82.609	Cynoglossus_semilaevis
ENSHBUG00000000776	npm1a	100	67.925	ENSCVAG00000008960	npm1a	99	68.553	Cyprinodon_variegatus
ENSHBUG00000000776	npm1a	98	59.032	ENSDARG00000014329	npm1a	94	71.242	Danio_rerio
ENSHBUG00000000776	npm1a	98	35.241	ENSEBUG00000012753	npm1a	93	34.862	Eptatretus_burgeri
ENSHBUG00000000776	npm1a	100	64.890	ENSELUG00000013705	npm1a	99	63.950	Esox_lucius
ENSHBUG00000000776	npm1a	100	70.126	ENSFHEG00000012496	npm1a	99	70.126	Fundulus_heteroclitus
ENSHBUG00000000776	npm1a	100	65.300	ENSGAFG00000013059	npm1a	99	66.246	Gambusia_affinis
ENSHBUG00000000776	npm1a	99	66.242	ENSGACG00000020319	npm1a	99	64.013	Gasterosteus_aculeatus
ENSHBUG00000000776	npm1a	99	52.174	ENSHCOG00000001059	npm1a	98	52.484	Hippocampus_comes
ENSHBUG00000000776	npm1a	98	60.759	ENSIPUG00000019452	npm1	98	61.076	Ictalurus_punctatus
ENSHBUG00000000776	npm1a	100	66.877	ENSKMAG00000010709	npm1a	99	64.669	Kryptolebias_marmoratus
ENSHBUG00000000776	npm1a	99	70.476	ENSLBEG00000008793	npm1a	99	69.841	Labrus_bergylta
ENSHBUG00000000776	npm1a	86	54.093	ENSLOCG00000009683	npm1a	99	54.093	Lepisosteus_oculatus
ENSHBUG00000000776	npm1a	99	72.930	ENSMAMG00000009344	npm1a	82	73.885	Mastacembelus_armatus
ENSHBUG00000000776	npm1a	100	97.785	ENSMZEG00005013717	npm1a	100	97.785	Maylandia_zebra
ENSHBUG00000000776	npm1a	95	70.764	ENSMMOG00000007980	npm1a	99	69.205	Mola_mola
ENSHBUG00000000776	npm1a	99	66.246	ENSMALG00000001146	npm1a	99	69.085	Monopterus_albus
ENSHBUG00000000776	npm1a	100	86.709	ENSNBRG00000013172	npm1a	100	86.709	Neolamprologus_brichardi
ENSHBUG00000000776	npm1a	100	84.127	ENSONIG00000001860	npm1a	99	85.714	Oreochromis_niloticus
ENSHBUG00000000776	npm1a	100	71.203	ENSORLG00000010179	npm1a	99	67.722	Oryzias_latipes
ENSHBUG00000000776	npm1a	100	68.354	ENSORLG00020020817	npm1a	99	68.038	Oryzias_latipes_hni
ENSHBUG00000000776	npm1a	100	71.203	ENSORLG00015003439	npm1a	99	67.722	Oryzias_latipes_hsok
ENSHBUG00000000776	npm1a	100	66.456	ENSOMEG00000007083	npm1a	99	66.139	Oryzias_melastigma
ENSHBUG00000000776	npm1a	100	54.232	ENSPKIG00000023943	npm1a	99	54.232	Paramormyrops_kingsleyae
ENSHBUG00000000776	npm1a	100	54.747	ENSPMGG00000011716	npm1a	99	54.747	Periophthalmus_magnuspinnatus
ENSHBUG00000000776	npm1a	100	68.770	ENSPFOG00000019173	npm1a	99	68.770	Poecilia_formosa
ENSHBUG00000000776	npm1a	100	67.398	ENSPLAG00000001093	npm1a	99	67.085	Poecilia_latipinna
ENSHBUG00000000776	npm1a	100	68.770	ENSPMEG00000012523	npm1a	99	68.770	Poecilia_mexicana
ENSHBUG00000000776	npm1a	100	69.304	ENSPREG00000001647	npm1a	99	68.038	Poecilia_reticulata
ENSHBUG00000000776	npm1a	100	96.825	ENSPNYG00000019321	npm1a	100	96.825	Pundamilia_nyererei
ENSHBUG00000000776	npm1a	98	58.991	ENSPNAG00000026891	npm1a	98	58.991	Pygocentrus_nattereri
ENSHBUG00000000776	npm1a	100	57.812	ENSSFOG00015007074	npm1a	99	57.812	Scleropages_formosus
ENSHBUG00000000776	npm1a	99	71.069	ENSSMAG00000019090	npm1a	99	70.533	Scophthalmus_maximus
ENSHBUG00000000776	npm1a	99	73.101	ENSSDUG00000015609	npm1a	99	73.502	Seriola_dumerili
ENSHBUG00000000776	npm1a	99	73.734	ENSSLDG00000017849	npm1a	99	73.817	Seriola_lalandi_dorsalis
ENSHBUG00000000776	npm1a	100	66.772	ENSSPAG00000021660	npm1a	99	66.456	Stegastes_partitus
ENSHBUG00000000776	npm1a	100	74.528	ENSTRUG00000024003	npm1a	99	74.528	Takifugu_rubripes
ENSHBUG00000000776	npm1a	99	69.206	ENSTNIG00000010773	npm1a	99	68.671	Tetraodon_nigroviridis
ENSHBUG00000000776	npm1a	99	59.937	ENSXCOG00000005958	npm1a	100	63.036	Xiphophorus_couchianus
ENSHBUG00000000776	npm1a	100	66.144	ENSXMAG00000000396	npm1a	99	66.458	Xiphophorus_maculatus