EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000001264 (Gene tree)
Gene ID: 102302402
Gene Symbol: pusl1
Alias: -
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 17352 bases
Position: chrJH425346.1:549542-566893
Accession: 102302402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000111	PseudoU_synth_1	PF01416.20	1.4e-32	1	2
ENSHBUP00000000111	PseudoU_synth_1	PF01416.20	1.4e-32	2	2
ENSHBUP00000000110	PseudoU_synth_1	PF01416.20	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016046	-	1388	XM_005918540	ENSHBUP00000000111	300 (aa)	XP_005918602	UPI0003BC9DCF
ENSHBUT00000016045	-	1468	-	ENSHBUP00000000110	291 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000001264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001264	pusl1	91	49.638	ENSG00000169972	PUSL1	98	48.000	Homo_sapiens
ENSHBUG00000001264	pusl1	95	78.671	ENSAPOG00000016290	pusl1	96	78.671	Acanthochromis_polyacanthus
ENSHBUG00000001264	pusl1	91	48.913	ENSAMEG00000013752	PUSL1	90	48.913	Ailuropoda_melanoleuca
ENSHBUG00000001264	pusl1	91	90.876	ENSACIG00000015240	pusl1	100	90.876	Amphilophus_citrinellus
ENSHBUG00000001264	pusl1	95	76.491	ENSAOCG00000019419	pusl1	86	76.491	Amphiprion_ocellaris
ENSHBUG00000001264	pusl1	95	76.923	ENSAPEG00000005452	pusl1	96	76.923	Amphiprion_percula
ENSHBUG00000001264	pusl1	99	77.778	ENSATEG00000024154	pusl1	99	77.778	Anabas_testudineus
ENSHBUG00000001264	pusl1	92	51.986	ENSAPLG00000004946	PUSL1	92	51.986	Anas_platyrhynchos
ENSHBUG00000001264	pusl1	89	54.231	ENSACAG00000014111	PUSL1	98	54.231	Anolis_carolinensis
ENSHBUG00000001264	pusl1	93	49.643	ENSANAG00000037456	PUSL1	91	49.643	Aotus_nancymaae
ENSHBUG00000001264	pusl1	100	98.667	ENSACLG00000008675	pusl1	100	98.667	Astatotilapia_calliptera
ENSHBUG00000001264	pusl1	94	62.057	ENSAMXG00000044007	pusl1	96	61.450	Astyanax_mexicanus
ENSHBUG00000001264	pusl1	91	49.638	ENSBTAG00000007619	PUSL1	94	49.638	Bos_taurus
ENSHBUG00000001264	pusl1	93	49.643	ENSCJAG00000010972	PUSL1	91	49.643	Callithrix_jacchus
ENSHBUG00000001264	pusl1	92	47.122	ENSCAFG00000019291	PUSL1	90	47.122	Canis_familiaris
ENSHBUG00000001264	pusl1	92	48.201	ENSCAFG00020011568	PUSL1	90	48.201	Canis_lupus_dingo
ENSHBUG00000001264	pusl1	91	49.275	ENSCHIG00000012615	PUSL1	95	49.275	Capra_hircus
ENSHBUG00000001264	pusl1	92	48.014	ENSCPOG00000005149	PUSL1	89	48.014	Cavia_porcellus
ENSHBUG00000001264	pusl1	93	49.643	ENSCCAG00000027475	PUSL1	91	49.643	Cebus_capucinus
ENSHBUG00000001264	pusl1	91	50.000	ENSCATG00000018260	PUSL1	90	50.000	Cercocebus_atys
ENSHBUG00000001264	pusl1	92	48.561	ENSCLAG00000005232	PUSL1	90	48.561	Chinchilla_lanigera
ENSHBUG00000001264	pusl1	91	49.638	ENSCSAG00000000680	PUSL1	90	49.638	Chlorocebus_sabaeus
ENSHBUG00000001264	pusl1	93	56.272	ENSCPBG00000022621	PUSL1	95	56.272	Chrysemys_picta_bellii
ENSHBUG00000001264	pusl1	91	49.638	ENSCANG00000034373	PUSL1	90	49.638	Colobus_angolensis_palliatus
ENSHBUG00000001264	pusl1	92	47.842	ENSCGRG00001012429	Pusl1	95	47.842	Cricetulus_griseus_chok1gshd
ENSHBUG00000001264	pusl1	92	47.842	ENSCGRG00000006466	Pusl1	95	47.842	Cricetulus_griseus_crigri
ENSHBUG00000001264	pusl1	96	73.958	ENSCSEG00000005159	pusl1	97	73.958	Cynoglossus_semilaevis
ENSHBUG00000001264	pusl1	81	65.546	ENSCVAG00000012923	pusl1	91	65.546	Cyprinodon_variegatus
ENSHBUG00000001264	pusl1	96	64.236	ENSDARG00000074565	pusl1	99	64.486	Danio_rerio
ENSHBUG00000001264	pusl1	93	33.115	FBgn0083976	CG34140	99	33.115	Drosophila_melanogaster
ENSHBUG00000001264	pusl1	91	49.455	ENSECAG00000006248	PUSL1	89	49.455	Equus_caballus
ENSHBUG00000001264	pusl1	91	49.281	ENSEEUG00000000837	PUSL1	93	49.281	Erinaceus_europaeus
ENSHBUG00000001264	pusl1	93	65.591	ENSELUG00000015945	pusl1	95	65.591	Esox_lucius
ENSHBUG00000001264	pusl1	91	49.275	ENSFCAG00000007617	PUSL1	91	49.275	Felis_catus
ENSHBUG00000001264	pusl1	96	80.556	ENSFHEG00000006370	pusl1	96	80.556	Fundulus_heteroclitus
ENSHBUG00000001264	pusl1	93	77.419	ENSGMOG00000019388	pusl1	99	77.419	Gadus_morhua
ENSHBUG00000001264	pusl1	93	52.857	ENSGALG00000001714	PUSL1	96	52.857	Gallus_gallus
ENSHBUG00000001264	pusl1	94	79.152	ENSGAFG00000007546	pusl1	96	79.152	Gambusia_affinis
ENSHBUG00000001264	pusl1	99	75.758	ENSGACG00000007848	pusl1	98	75.758	Gasterosteus_aculeatus
ENSHBUG00000001264	pusl1	95	54.704	ENSGAGG00000004730	PUSL1	98	54.704	Gopherus_agassizii
ENSHBUG00000001264	pusl1	82	49.793	ENSGGOG00000005364	PUSL1	93	49.793	Gorilla_gorilla
ENSHBUG00000001264	pusl1	92	47.312	ENSHGLG00000017570	PUSL1	90	47.312	Heterocephalus_glaber_female
ENSHBUG00000001264	pusl1	85	47.809	ENSHGLG00100007641	PUSL1	82	47.809	Heterocephalus_glaber_male
ENSHBUG00000001264	pusl1	94	75.177	ENSHCOG00000010077	pusl1	100	76.087	Hippocampus_comes
ENSHBUG00000001264	pusl1	93	65.233	ENSIPUG00000023921	pusl1	96	65.233	Ictalurus_punctatus
ENSHBUG00000001264	pusl1	91	49.638	ENSSTOG00000001783	PUSL1	85	49.638	Ictidomys_tridecemlineatus
ENSHBUG00000001264	pusl1	93	50.357	ENSJJAG00000020471	Pusl1	94	50.357	Jaculus_jaculus
ENSHBUG00000001264	pusl1	93	70.741	ENSKMAG00000005154	pusl1	92	70.741	Kryptolebias_marmoratus
ENSHBUG00000001264	pusl1	97	78.082	ENSLBEG00000013469	pusl1	100	78.082	Labrus_bergylta
ENSHBUG00000001264	pusl1	66	54.922	ENSLACG00000018795	PUSL1	95	54.922	Latimeria_chalumnae
ENSHBUG00000001264	pusl1	99	55.333	ENSLOCG00000002210	pusl1	99	55.333	Lepisosteus_oculatus
ENSHBUG00000001264	pusl1	85	50.403	ENSLAFG00000013685	PUSL1	92	50.403	Loxodonta_africana
ENSHBUG00000001264	pusl1	91	49.638	ENSMFAG00000046288	PUSL1	90	49.638	Macaca_fascicularis
ENSHBUG00000001264	pusl1	91	42.754	ENSMMUG00000016279	PUSL1	89	42.754	Macaca_mulatta
ENSHBUG00000001264	pusl1	91	49.638	ENSMNEG00000037989	PUSL1	90	49.638	Macaca_nemestrina
ENSHBUG00000001264	pusl1	97	80.069	ENSMAMG00000016538	pusl1	96	80.069	Mastacembelus_armatus
ENSHBUG00000001264	pusl1	100	98.667	ENSMZEG00005026990	pusl1	100	98.667	Maylandia_zebra
ENSHBUG00000001264	pusl1	93	51.429	ENSMGAG00000003037	PUSL1	95	51.429	Meleagris_gallopavo
ENSHBUG00000001264	pusl1	92	48.201	ENSMAUG00000019924	Pusl1	95	48.201	Mesocricetus_auratus
ENSHBUG00000001264	pusl1	91	51.449	ENSMICG00000014171	PUSL1	93	51.449	Microcebus_murinus
ENSHBUG00000001264	pusl1	92	49.640	ENSMOCG00000005602	Pusl1	95	49.640	Microtus_ochrogaster
ENSHBUG00000001264	pusl1	92	78.214	ENSMMOG00000003269	pusl1	100	78.214	Mola_mola
ENSHBUG00000001264	pusl1	99	77.181	ENSMALG00000021686	pusl1	98	77.181	Monopterus_albus
ENSHBUG00000001264	pusl1	92	48.214	MGP_CAROLIEiJ_G0026911	Pusl1	95	48.214	Mus_caroli
ENSHBUG00000001264	pusl1	91	48.561	ENSMUSG00000051557	Pusl1	94	48.561	Mus_musculus
ENSHBUG00000001264	pusl1	92	48.571	MGP_PahariEiJ_G0029260	Pusl1	95	48.571	Mus_pahari
ENSHBUG00000001264	pusl1	91	49.281	MGP_SPRETEiJ_G0027906	Pusl1	94	49.281	Mus_spretus
ENSHBUG00000001264	pusl1	95	48.432	ENSMPUG00000014313	PUSL1	93	48.432	Mustela_putorius_furo
ENSHBUG00000001264	pusl1	92	49.462	ENSNGAG00000004647	Pusl1	83	49.462	Nannospalax_galili
ENSHBUG00000001264	pusl1	84	94.309	ENSNBRG00000014762	pusl1	89	94.309	Neolamprologus_brichardi
ENSHBUG00000001264	pusl1	85	51.004	ENSNLEG00000000051	PUSL1	90	51.004	Nomascus_leucogenys
ENSHBUG00000001264	pusl1	91	51.439	ENSMEUG00000011649	-	96	51.439	Notamacropus_eugenii
ENSHBUG00000001264	pusl1	91	42.491	ENSMEUG00000005176	-	98	42.491	Notamacropus_eugenii
ENSHBUG00000001264	pusl1	92	48.921	ENSODEG00000008247	PUSL1	89	48.921	Octodon_degus
ENSHBUG00000001264	pusl1	99	97.315	ENSONIG00000019361	pusl1	99	97.315	Oreochromis_niloticus
ENSHBUG00000001264	pusl1	97	72.603	ENSORLG00000016228	pusl1	99	72.603	Oryzias_latipes
ENSHBUG00000001264	pusl1	95	74.386	ENSORLG00020013710	pusl1	96	74.386	Oryzias_latipes_hni
ENSHBUG00000001264	pusl1	94	74.377	ENSORLG00015008715	pusl1	99	74.377	Oryzias_latipes_hsok
ENSHBUG00000001264	pusl1	95	74.386	ENSOMEG00000018897	pusl1	98	74.386	Oryzias_melastigma
ENSHBUG00000001264	pusl1	91	50.362	ENSOGAG00000031692	PUSL1	95	50.362	Otolemur_garnettii
ENSHBUG00000001264	pusl1	85	50.403	ENSOARG00000004905	PUSL1	92	50.403	Ovis_aries
ENSHBUG00000001264	pusl1	91	50.000	ENSPPAG00000029283	PUSL1	90	50.000	Pan_paniscus
ENSHBUG00000001264	pusl1	91	49.638	ENSPPRG00000023329	PUSL1	91	49.638	Panthera_pardus
ENSHBUG00000001264	pusl1	85	50.806	ENSPTIG00000018532	PUSL1	91	50.806	Panthera_tigris_altaica
ENSHBUG00000001264	pusl1	91	49.638	ENSPTRG00000000021	PUSL1	90	49.638	Pan_troglodytes
ENSHBUG00000001264	pusl1	91	49.638	ENSPANG00000000591	PUSL1	90	49.638	Papio_anubis
ENSHBUG00000001264	pusl1	94	60.993	ENSPKIG00000002447	pusl1	97	60.993	Paramormyrops_kingsleyae
ENSHBUG00000001264	pusl1	87	58.893	ENSPSIG00000002781	PUSL1	94	58.893	Pelodiscus_sinensis
ENSHBUG00000001264	pusl1	92	72.101	ENSPMGG00000011051	pusl1	99	72.101	Periophthalmus_magnuspinnatus
ENSHBUG00000001264	pusl1	92	49.281	ENSPEMG00000013541	Pusl1	95	49.281	Peromyscus_maniculatus_bairdii
ENSHBUG00000001264	pusl1	93	48.936	ENSPCIG00000007816	-	64	48.936	Phascolarctos_cinereus
ENSHBUG00000001264	pusl1	99	75.338	ENSPFOG00000015448	pusl1	98	75.338	Poecilia_formosa
ENSHBUG00000001264	pusl1	97	76.190	ENSPLAG00000004348	pusl1	99	76.190	Poecilia_latipinna
ENSHBUG00000001264	pusl1	97	76.190	ENSPMEG00000000931	pusl1	99	76.190	Poecilia_mexicana
ENSHBUG00000001264	pusl1	97	74.150	ENSPREG00000002324	pusl1	99	74.150	Poecilia_reticulata
ENSHBUG00000001264	pusl1	83	49.383	ENSPPYG00000002014	PUSL1	86	49.383	Pongo_abelii
ENSHBUG00000001264	pusl1	64	47.619	ENSPCAG00000002272	PUSL1	77	47.619	Procavia_capensis
ENSHBUG00000001264	pusl1	67	54.167	ENSPVAG00000001016	PUSL1	66	54.167	Pteropus_vampyrus
ENSHBUG00000001264	pusl1	80	99.167	ENSPNYG00000006588	pusl1	100	99.167	Pundamilia_nyererei
ENSHBUG00000001264	pusl1	94	64.894	ENSPNAG00000024441	pusl1	97	64.894	Pygocentrus_nattereri
ENSHBUG00000001264	pusl1	91	48.913	ENSRNOG00000022354	Pusl1	94	48.913	Rattus_norvegicus
ENSHBUG00000001264	pusl1	91	49.275	ENSRBIG00000036842	PUSL1	90	49.275	Rhinopithecus_bieti
ENSHBUG00000001264	pusl1	91	49.275	ENSRROG00000030704	PUSL1	90	49.275	Rhinopithecus_roxellana
ENSHBUG00000001264	pusl1	86	50.000	ENSSBOG00000032249	PUSL1	90	50.000	Saimiri_boliviensis_boliviensis
ENSHBUG00000001264	pusl1	52	51.948	ENSSHAG00000004840	-	84	47.879	Sarcophilus_harrisii
ENSHBUG00000001264	pusl1	96	61.856	ENSSFOG00015008281	pusl1	96	61.856	Scleropages_formosus
ENSHBUG00000001264	pusl1	97	77.740	ENSSMAG00000007187	pusl1	97	77.740	Scophthalmus_maximus
ENSHBUG00000001264	pusl1	99	80.602	ENSSDUG00000000287	pusl1	92	80.602	Seriola_dumerili
ENSHBUG00000001264	pusl1	99	80.268	ENSSLDG00000009605	pusl1	96	80.268	Seriola_lalandi_dorsalis
ENSHBUG00000001264	pusl1	56	50.000	ENSSARG00000005323	-	86	50.000	Sorex_araneus
ENSHBUG00000001264	pusl1	91	72.263	ENSSPAG00000002528	pusl1	100	72.263	Stegastes_partitus
ENSHBUG00000001264	pusl1	92	49.286	ENSSSCG00000003338	PUSL1	90	49.286	Sus_scrofa
ENSHBUG00000001264	pusl1	91	51.460	ENSTGUG00000003214	PUSL1	96	51.636	Taeniopygia_guttata
ENSHBUG00000001264	pusl1	98	74.061	ENSTRUG00000010102	pusl1	99	74.061	Takifugu_rubripes
ENSHBUG00000001264	pusl1	62	70.718	ENSTNIG00000005789	pusl1	82	70.718	Tetraodon_nigroviridis
ENSHBUG00000001264	pusl1	60	43.889	ENSTBEG00000005001	PUSL1	74	43.889	Tupaia_belangeri
ENSHBUG00000001264	pusl1	91	43.369	ENSTTRG00000017030	PUSL1	90	43.369	Tursiops_truncatus
ENSHBUG00000001264	pusl1	82	49.174	ENSUAMG00000012801	PUSL1	79	49.174	Ursus_americanus
ENSHBUG00000001264	pusl1	82	49.174	ENSUMAG00000002084	PUSL1	79	49.174	Ursus_maritimus
ENSHBUG00000001264	pusl1	92	48.201	ENSVVUG00000004320	PUSL1	91	42.722	Vulpes_vulpes
ENSHBUG00000001264	pusl1	76	53.913	ENSXETG00000011145	pusl1	100	53.913	Xenopus_tropicalis
ENSHBUG00000001264	pusl1	94	75.445	ENSXCOG00000017748	pusl1	99	75.445	Xiphophorus_couchianus
ENSHBUG00000001264	pusl1	97	78.912	ENSXMAG00000018846	pusl1	99	78.912	Xiphophorus_maculatus