EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000001316 (Gene tree)
Gene ID: 102294001
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 4533 bases
Position: chrJH425577.1:771286-775818
Accession: 102294001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000168	PseudoU_synth_1	PF01416.20	1.2e-15	1	1
ENSHBUP00000000157	PseudoU_synth_1	PF01416.20	1.5e-15	1	1
ENSHBUP00000000158	PseudoU_synth_1	PF01416.20	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015970	-	2093	-	ENSHBUP00000000157	419 (aa)	-	-
ENSHBUT00000015967	-	1719	XM_005938841	ENSHBUP00000000168	391 (aa)	XP_005938903	UPI0003BD6AA3
ENSHBUT00000015971	-	2004	XM_005938840	ENSHBUP00000000158	421 (aa)	XP_005938902	UPI0003BC7A28

Gene Model

Click here to download ENSHBUG00000001316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001316	pus1	92	68.956	ENSG00000177192	PUS1	88	71.848	Homo_sapiens
ENSHBUG00000001316	pus1	100	86.957	ENSAPOG00000007254	pus1	100	85.986	Acanthochromis_polyacanthus
ENSHBUG00000001316	pus1	87	71.053	ENSAMEG00000013715	PUS1	83	71.053	Ailuropoda_melanoleuca
ENSHBUG00000001316	pus1	100	91.560	ENSACIG00000009169	pus1	96	90.704	Amphilophus_citrinellus
ENSHBUG00000001316	pus1	100	87.724	ENSAOCG00000022207	pus1	100	86.461	Amphiprion_ocellaris
ENSHBUG00000001316	pus1	100	87.468	ENSAPEG00000006039	pus1	99	87.468	Amphiprion_percula
ENSHBUG00000001316	pus1	100	85.678	ENSATEG00000020688	pus1	100	85.678	Anabas_testudineus
ENSHBUG00000001316	pus1	91	71.031	ENSACAG00000007367	PUS1	96	71.031	Anolis_carolinensis
ENSHBUG00000001316	pus1	83	68.807	ENSANAG00000036192	PUS1	100	68.807	Aotus_nancymaae
ENSHBUG00000001316	pus1	100	99.525	ENSACLG00000020868	pus1	100	99.525	Astatotilapia_calliptera
ENSHBUG00000001316	pus1	97	75.000	ENSAMXG00000008710	pus1	87	75.000	Astyanax_mexicanus
ENSHBUG00000001316	pus1	91	69.296	ENSBTAG00000012990	PUS1	86	71.014	Bos_taurus
ENSHBUG00000001316	pus1	88	38.997	WBGene00004248	pus-1	85	38.997	Caenorhabditis_elegans
ENSHBUG00000001316	pus1	65	70.472	ENSCJAG00000003720	PUS1	70	69.884	Callithrix_jacchus
ENSHBUG00000001316	pus1	96	66.844	ENSCAFG00000006429	PUS1	88	69.663	Canis_familiaris
ENSHBUG00000001316	pus1	91	69.663	ENSCAFG00020010737	PUS1	81	69.663	Canis_lupus_dingo
ENSHBUG00000001316	pus1	91	69.014	ENSCHIG00000000487	PUS1	87	69.014	Capra_hircus
ENSHBUG00000001316	pus1	89	70.115	ENSTSYG00000032605	PUS1	99	67.021	Carlito_syrichta
ENSHBUG00000001316	pus1	76	72.575	ENSCAPG00000006421	PUS1	94	72.039	Cavia_aperea
ENSHBUG00000001316	pus1	90	68.661	ENSCPOG00000001027	PUS1	82	68.258	Cavia_porcellus
ENSHBUG00000001316	pus1	86	71.429	ENSCCAG00000015879	PUS1	84	71.895	Cebus_capucinus
ENSHBUG00000001316	pus1	87	71.848	ENSCATG00000032870	PUS1	84	72.222	Cercocebus_atys
ENSHBUG00000001316	pus1	87	69.208	ENSCLAG00000011689	PUS1	94	62.657	Chinchilla_lanigera
ENSHBUG00000001316	pus1	87	72.141	ENSCSAG00000001879	PUS1	79	72.141	Chlorocebus_sabaeus
ENSHBUG00000001316	pus1	80	72.611	ENSCPBG00000024715	PUS1	93	70.642	Chrysemys_picta_bellii
ENSHBUG00000001316	pus1	88	45.190	ENSCING00000009426	-	91	45.190	Ciona_intestinalis
ENSHBUG00000001316	pus1	95	40.106	ENSCSAVG00000003751	-	78	40.106	Ciona_savignyi
ENSHBUG00000001316	pus1	92	61.538	ENSCANG00000035561	PUS1	90	62.651	Colobus_angolensis_palliatus
ENSHBUG00000001316	pus1	94	68.022	ENSCGRG00001019592	Pus1	87	68.022	Cricetulus_griseus_chok1gshd
ENSHBUG00000001316	pus1	94	68.022	ENSCGRG00000004048	Pus1	93	68.022	Cricetulus_griseus_crigri
ENSHBUG00000001316	pus1	100	79.284	ENSCSEG00000003629	pus1	100	76.960	Cynoglossus_semilaevis
ENSHBUG00000001316	pus1	100	84.655	ENSCVAG00000001265	pus1	100	83.135	Cyprinodon_variegatus
ENSHBUG00000001316	pus1	99	66.029	ENSDARG00000045562	pus1	97	75.458	Danio_rerio
ENSHBUG00000001316	pus1	91	67.887	ENSDNOG00000045576	PUS1	93	71.803	Dasypus_novemcinctus
ENSHBUG00000001316	pus1	83	68.827	ENSDORG00000011455	Pus1	99	68.827	Dipodomys_ordii
ENSHBUG00000001316	pus1	86	46.064	FBgn0038811	PUS1	82	46.199	Drosophila_melanogaster
ENSHBUG00000001316	pus1	86	71.302	ENSETEG00000019160	PUS1	84	70.554	Echinops_telfairi
ENSHBUG00000001316	pus1	93	42.784	ENSEBUG00000000368	-	69	42.784	Eptatretus_burgeri
ENSHBUG00000001316	pus1	94	68.207	ENSEASG00005016535	PUS1	85	68.207	Equus_asinus_asinus
ENSHBUG00000001316	pus1	94	68.207	ENSECAG00000006965	PUS1	92	68.207	Equus_caballus
ENSHBUG00000001316	pus1	97	76.190	ENSELUG00000010424	pus1	96	76.190	Esox_lucius
ENSHBUG00000001316	pus1	91	68.732	ENSFCAG00000010780	PUS1	82	68.732	Felis_catus
ENSHBUG00000001316	pus1	97	67.003	ENSFALG00000008273	PUS1	99	64.151	Ficedula_albicollis
ENSHBUG00000001316	pus1	90	68.272	ENSFDAG00000012518	PUS1	85	68.272	Fukomys_damarensis
ENSHBUG00000001316	pus1	100	87.724	ENSFHEG00000010504	pus1	100	85.308	Fundulus_heteroclitus
ENSHBUG00000001316	pus1	100	74.680	ENSGMOG00000008143	pus1	99	74.809	Gadus_morhua
ENSHBUG00000001316	pus1	97	68.241	ENSGALG00000002354	PUS1	93	68.241	Gallus_gallus
ENSHBUG00000001316	pus1	100	86.957	ENSGAFG00000006578	pus1	100	85.036	Gambusia_affinis
ENSHBUG00000001316	pus1	100	82.697	ENSGACG00000017566	pus1	99	82.697	Gasterosteus_aculeatus
ENSHBUG00000001316	pus1	84	69.909	ENSGAGG00000016730	-	94	69.909	Gopherus_agassizii
ENSHBUG00000001316	pus1	94	66.667	ENSGGOG00000009178	PUS1	89	66.667	Gorilla_gorilla
ENSHBUG00000001316	pus1	87	68.235	ENSHGLG00000016086	PUS1	87	68.235	Heterocephalus_glaber_female
ENSHBUG00000001316	pus1	87	67.941	ENSHGLG00100019362	PUS1	87	67.941	Heterocephalus_glaber_male
ENSHBUG00000001316	pus1	100	78.772	ENSHCOG00000014288	pus1	96	76.247	Hippocampus_comes
ENSHBUG00000001316	pus1	99	74.807	ENSIPUG00000010387	pus1	91	78.202	Ictalurus_punctatus
ENSHBUG00000001316	pus1	85	71.772	ENSSTOG00000011245	PUS1	83	69.318	Ictidomys_tridecemlineatus
ENSHBUG00000001316	pus1	94	67.486	ENSJJAG00000000088	Pus1	87	67.480	Jaculus_jaculus
ENSHBUG00000001316	pus1	98	81.558	ENSKMAG00000012702	pus1	100	79.097	Kryptolebias_marmoratus
ENSHBUG00000001316	pus1	100	81.378	ENSLBEG00000002845	pus1	98	80.798	Labrus_bergylta
ENSHBUG00000001316	pus1	82	55.590	ENSLACG00000016044	-	97	55.590	Latimeria_chalumnae
ENSHBUG00000001316	pus1	92	67.956	ENSLACG00000018598	PUS1	95	66.142	Latimeria_chalumnae
ENSHBUG00000001316	pus1	97	71.053	ENSLOCG00000006127	pus1	96	71.053	Lepisosteus_oculatus
ENSHBUG00000001316	pus1	91	68.079	ENSLAFG00000028731	PUS1	95	68.079	Loxodonta_africana
ENSHBUG00000001316	pus1	87	72.141	ENSMFAG00000041194	PUS1	84	72.549	Macaca_fascicularis
ENSHBUG00000001316	pus1	87	72.141	ENSMMUG00000031463	PUS1	88	72.141	Macaca_mulatta
ENSHBUG00000001316	pus1	87	72.141	ENSMNEG00000002814	PUS1	84	72.549	Macaca_nemestrina
ENSHBUG00000001316	pus1	78	72.697	ENSMLEG00000043560	PUS1	93	72.697	Mandrillus_leucophaeus
ENSHBUG00000001316	pus1	100	83.376	ENSMAMG00000007371	pus1	100	82.185	Mastacembelus_armatus
ENSHBUG00000001316	pus1	100	99.744	ENSMZEG00005017746	pus1	100	99.525	Maylandia_zebra
ENSHBUG00000001316	pus1	83	73.065	ENSMGAG00000001958	PUS1	98	73.065	Meleagris_gallopavo
ENSHBUG00000001316	pus1	88	71.304	ENSMAUG00000001482	Pus1	81	71.304	Mesocricetus_auratus
ENSHBUG00000001316	pus1	89	69.628	ENSMICG00000030980	PUS1	91	66.938	Microcebus_murinus
ENSHBUG00000001316	pus1	94	66.938	ENSMOCG00000022311	Pus1	87	66.938	Microtus_ochrogaster
ENSHBUG00000001316	pus1	100	76.982	ENSMMOG00000021022	pus1	99	76.982	Mola_mola
ENSHBUG00000001316	pus1	87	68.805	ENSMODG00000015551	PUS1	80	67.409	Monodelphis_domestica
ENSHBUG00000001316	pus1	99	83.590	ENSMALG00000013202	pus1	99	81.905	Monopterus_albus
ENSHBUG00000001316	pus1	94	68.835	MGP_CAROLIEiJ_G0027551	Pus1	93	68.835	Mus_caroli
ENSHBUG00000001316	pus1	94	68.835	ENSMUSG00000029507	Pus1	93	68.835	Mus_musculus
ENSHBUG00000001316	pus1	94	69.106	MGP_PahariEiJ_G0024133	Pus1	93	69.106	Mus_pahari
ENSHBUG00000001316	pus1	94	68.835	MGP_SPRETEiJ_G0028549	Pus1	93	68.835	Mus_spretus
ENSHBUG00000001316	pus1	87	71.053	ENSMPUG00000002314	PUS1	86	71.053	Mustela_putorius_furo
ENSHBUG00000001316	pus1	93	67.403	ENSMLUG00000015790	PUS1	99	67.403	Myotis_lucifugus
ENSHBUG00000001316	pus1	92	69.421	ENSNGAG00000012976	Pus1	87	68.564	Nannospalax_galili
ENSHBUG00000001316	pus1	100	98.210	ENSNBRG00000020502	pus1	100	98.210	Neolamprologus_brichardi
ENSHBUG00000001316	pus1	92	67.033	ENSNLEG00000008505	PUS1	100	69.497	Nomascus_leucogenys
ENSHBUG00000001316	pus1	87	64.035	ENSMEUG00000002825	PUS1	92	64.035	Notamacropus_eugenii
ENSHBUG00000001316	pus1	87	61.765	ENSOPRG00000002701	-	97	57.256	Ochotona_princeps
ENSHBUG00000001316	pus1	87	70.588	ENSODEG00000008248	PUS1	89	70.588	Octodon_degus
ENSHBUG00000001316	pus1	100	96.717	ENSONIG00000003803	pus1	100	96.725	Oreochromis_niloticus
ENSHBUG00000001316	pus1	84	30.137	ENSOANG00000000406	PUS3	70	30.055	Ornithorhynchus_anatinus
ENSHBUG00000001316	pus1	91	70.141	ENSOANG00000010619	PUS1	92	64.838	Ornithorhynchus_anatinus
ENSHBUG00000001316	pus1	90	68.946	ENSOCUG00000007310	PUS1	76	68.258	Oryctolagus_cuniculus
ENSHBUG00000001316	pus1	99	81.795	ENSORLG00000010787	pus1	100	79.384	Oryzias_latipes
ENSHBUG00000001316	pus1	99	81.795	ENSORLG00020011483	pus1	100	79.384	Oryzias_latipes_hni
ENSHBUG00000001316	pus1	99	81.538	ENSORLG00015023012	pus1	99	81.538	Oryzias_latipes_hsok
ENSHBUG00000001316	pus1	97	81.627	ENSOMEG00000022655	pus1	96	79.854	Oryzias_melastigma
ENSHBUG00000001316	pus1	90	69.231	ENSOGAG00000008720	PUS1	96	66.048	Otolemur_garnettii
ENSHBUG00000001316	pus1	91	68.732	ENSOARG00000013316	PUS1	80	68.732	Ovis_aries
ENSHBUG00000001316	pus1	92	68.681	ENSPPAG00000040971	PUS1	82	72.549	Pan_paniscus
ENSHBUG00000001316	pus1	91	68.732	ENSPPRG00000015456	PUS1	88	68.732	Panthera_pardus
ENSHBUG00000001316	pus1	90	68.750	ENSPTIG00000004201	PUS1	90	68.732	Panthera_tigris_altaica
ENSHBUG00000001316	pus1	92	68.681	ENSPTRG00000005643	PUS1	82	72.549	Pan_troglodytes
ENSHBUG00000001316	pus1	87	72.141	ENSPANG00000000376	PUS1	84	72.549	Papio_anubis
ENSHBUG00000001316	pus1	93	69.126	ENSPKIG00000019369	pus1	87	67.448	Paramormyrops_kingsleyae
ENSHBUG00000001316	pus1	96	68.435	ENSPSIG00000016432	PUS1	88	68.158	Pelodiscus_sinensis
ENSHBUG00000001316	pus1	94	80.707	ENSPMGG00000004522	pus1	97	79.576	Periophthalmus_magnuspinnatus
ENSHBUG00000001316	pus1	94	68.293	ENSPEMG00000013448	Pus1	87	68.293	Peromyscus_maniculatus_bairdii
ENSHBUG00000001316	pus1	84	59.337	ENSPMAG00000004636	pus1	99	59.337	Petromyzon_marinus
ENSHBUG00000001316	pus1	77	62.458	ENSPCIG00000022609	-	75	60.635	Phascolarctos_cinereus
ENSHBUG00000001316	pus1	100	85.166	ENSPFOG00000019669	pus1	100	83.848	Poecilia_formosa
ENSHBUG00000001316	pus1	100	84.910	ENSPLAG00000007185	pus1	100	83.610	Poecilia_latipinna
ENSHBUG00000001316	pus1	100	84.910	ENSPLAG00000002692	-	100	83.610	Poecilia_latipinna
ENSHBUG00000001316	pus1	100	84.910	ENSPMEG00000011115	PUS1	100	83.610	Poecilia_mexicana
ENSHBUG00000001316	pus1	100	84.910	ENSPMEG00000006038	pus1	99	83.981	Poecilia_mexicana
ENSHBUG00000001316	pus1	100	84.655	ENSPREG00000007231	pus1	99	86.630	Poecilia_reticulata
ENSHBUG00000001316	pus1	92	68.681	ENSPPYG00000005132	PUS1	85	68.681	Pongo_abelii
ENSHBUG00000001316	pus1	67	66.031	ENSPCAG00000009110	-	64	66.031	Procavia_capensis
ENSHBUG00000001316	pus1	82	66.771	ENSPCOG00000015595	PUS1	89	60.773	Propithecus_coquereli
ENSHBUG00000001316	pus1	100	99.525	ENSPNYG00000013571	pus1	100	99.525	Pundamilia_nyererei
ENSHBUG00000001316	pus1	97	75.066	ENSPNAG00000003938	pus1	88	75.066	Pygocentrus_nattereri
ENSHBUG00000001316	pus1	94	68.579	ENSRNOG00000037500	Pus1	86	68.579	Rattus_norvegicus
ENSHBUG00000001316	pus1	92	69.231	ENSRBIG00000043177	PUS1	91	69.231	Rhinopithecus_bieti
ENSHBUG00000001316	pus1	92	69.231	ENSRROG00000039744	PUS1	89	69.508	Rhinopithecus_roxellana
ENSHBUG00000001316	pus1	82	40.940	YPL212C	-	61	39.264	Saccharomyces_cerevisiae
ENSHBUG00000001316	pus1	92	68.681	ENSSBOG00000023593	PUS1	93	69.018	Saimiri_boliviensis_boliviensis
ENSHBUG00000001316	pus1	92	69.722	ENSSHAG00000013193	PUS1	84	71.387	Sarcophilus_harrisii
ENSHBUG00000001316	pus1	77	30.899	ENSSHAG00000001382	PUS3	67	30.899	Sarcophilus_harrisii
ENSHBUG00000001316	pus1	94	70.270	ENSSFOG00015003463	pus1	87	69.372	Scleropages_formosus
ENSHBUG00000001316	pus1	100	84.910	ENSSMAG00000019075	pus1	100	83.135	Scophthalmus_maximus
ENSHBUG00000001316	pus1	100	88.491	ENSSDUG00000007102	pus1	100	85.511	Seriola_dumerili
ENSHBUG00000001316	pus1	100	87.980	ENSSLDG00000022850	pus1	100	85.036	Seriola_lalandi_dorsalis
ENSHBUG00000001316	pus1	78	62.829	ENSSARG00000008367	PUS1	98	62.829	Sorex_araneus
ENSHBUG00000001316	pus1	96	69.921	ENSSPUG00000010009	PUS1	95	69.921	Sphenodon_punctatus
ENSHBUG00000001316	pus1	100	86.445	ENSSPAG00000006272	pus1	99	86.445	Stegastes_partitus
ENSHBUG00000001316	pus1	92	68.994	ENSSSCG00000009741	PUS1	87	70.690	Sus_scrofa
ENSHBUG00000001316	pus1	84	75.152	ENSTGUG00000008068	PUS1	99	75.152	Taeniopygia_guttata
ENSHBUG00000001316	pus1	96	77.926	ENSTRUG00000002198	pus1	92	79.224	Takifugu_rubripes
ENSHBUG00000001316	pus1	97	75.000	ENSTNIG00000003942	pus1	95	75.789	Tetraodon_nigroviridis
ENSHBUG00000001316	pus1	94	67.486	ENSTTRG00000000632	PUS1	86	67.486	Tursiops_truncatus
ENSHBUG00000001316	pus1	87	70.468	ENSUAMG00000017197	PUS1	86	70.468	Ursus_americanus
ENSHBUG00000001316	pus1	87	70.760	ENSUMAG00000002831	PUS1	95	73.016	Ursus_maritimus
ENSHBUG00000001316	pus1	77	30.145	ENSVPAG00000001495	PUS3	66	30.145	Vicugna_pacos
ENSHBUG00000001316	pus1	91	69.296	ENSVVUG00000004199	PUS1	87	65.104	Vulpes_vulpes
ENSHBUG00000001316	pus1	82	49.846	ENSXETG00000033640	-	99	49.846	Xenopus_tropicalis
ENSHBUG00000001316	pus1	93	67.493	ENSXETG00000002030	pus1	90	67.493	Xenopus_tropicalis
ENSHBUG00000001316	pus1	100	87.212	ENSXCOG00000004722	pus1	97	88.391	Xiphophorus_couchianus
ENSHBUG00000001316	pus1	100	86.957	ENSXMAG00000000988	pus1	100	85.511	Xiphophorus_maculatus