EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000001454 (Gene tree)
Gene ID: 102307380
Gene Symbol: -
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3713 bases
Position: chrJH425349.1:1027859-1031571
Accession: 102307380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000300	RRM_1	PF00076.22	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015730	-	2481	XM_005919218	ENSHBUP00000000300	265 (aa)	XP_005919280	UPI0003BD7665

Gene Model

Click here to download ENSHBUG00000001454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000001454	-	100	53.025	ENSHBUG00000020196	alyref	100	54.577

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001454	-	100	71.161	ENSAPOG00000000183	-	100	70.412	Acanthochromis_polyacanthus
ENSHBUG00000001454	-	100	78.309	ENSACIG00000020351	-	100	75.735	Amphilophus_citrinellus
ENSHBUG00000001454	-	98	52.899	ENSACIG00000006351	alyref	97	54.839	Amphilophus_citrinellus
ENSHBUG00000001454	-	100	70.412	ENSAOCG00000019305	-	100	70.037	Amphiprion_ocellaris
ENSHBUG00000001454	-	100	54.643	ENSAOCG00000014012	alyref	100	56.738	Amphiprion_ocellaris
ENSHBUG00000001454	-	100	54.643	ENSAPEG00000014603	alyref	100	56.738	Amphiprion_percula
ENSHBUG00000001454	-	100	70.037	ENSAPEG00000013527	-	100	69.663	Amphiprion_percula
ENSHBUG00000001454	-	100	68.914	ENSATEG00000000382	-	100	68.165	Anabas_testudineus
ENSHBUG00000001454	-	100	53.846	ENSATEG00000004307	alyref	100	56.491	Anabas_testudineus
ENSHBUG00000001454	-	52	62.044	ENSAPLG00000014745	-	97	62.500	Anas_platyrhynchos
ENSHBUG00000001454	-	100	53.025	ENSACLG00000008432	alyref	100	54.577	Astatotilapia_calliptera
ENSHBUG00000001454	-	100	98.113	ENSACLG00000010184	-	100	98.113	Astatotilapia_calliptera
ENSHBUG00000001454	-	100	54.895	ENSAMXG00000007359	alyref	100	54.545	Astyanax_mexicanus
ENSHBUG00000001454	-	68	48.925	ENSCING00000013568	-	98	42.647	Ciona_intestinalis
ENSHBUG00000001454	-	98	44.569	ENSCSAVG00000003324	-	98	43.019	Ciona_savignyi
ENSHBUG00000001454	-	100	56.429	ENSCSEG00000017800	alyref	100	56.071	Cynoglossus_semilaevis
ENSHBUG00000001454	-	100	62.547	ENSCVAG00000007789	-	100	62.921	Cyprinodon_variegatus
ENSHBUG00000001454	-	100	54.839	ENSCVAG00000014869	alyref	100	55.160	Cyprinodon_variegatus
ENSHBUG00000001454	-	100	56.897	ENSDARG00000077732	alyref	100	56.747	Danio_rerio
ENSHBUG00000001454	-	99	38.944	FBgn0010774	Ref1	67	35.945	Drosophila_melanogaster
ENSHBUG00000001454	-	100	41.132	ENSEBUG00000006305	alyref	100	42.066	Eptatretus_burgeri
ENSHBUG00000001454	-	98	47.232	ENSEBUG00000008253	alyref	96	41.404	Eptatretus_burgeri
ENSHBUG00000001454	-	100	52.721	ENSELUG00000017178	alyref	100	54.965	Esox_lucius
ENSHBUG00000001454	-	100	61.210	ENSELUG00000008849	-	100	60.357	Esox_lucius
ENSHBUG00000001454	-	60	63.190	ENSFALG00000011923	-	94	64.516	Ficedula_albicollis
ENSHBUG00000001454	-	100	56.228	ENSFHEG00000019426	alyref	100	56.429	Fundulus_heteroclitus
ENSHBUG00000001454	-	100	63.296	ENSFHEG00000004698	-	100	64.419	Fundulus_heteroclitus
ENSHBUG00000001454	-	100	52.688	ENSGMOG00000009882	alyref	100	52.330	Gadus_morhua
ENSHBUG00000001454	-	72	63.776	ENSGMOG00000013122	-	100	61.421	Gadus_morhua
ENSHBUG00000001454	-	100	53.448	ENSGAFG00000006014	alyref	100	55.245	Gambusia_affinis
ENSHBUG00000001454	-	100	61.049	ENSGAFG00000007573	-	100	58.801	Gambusia_affinis
ENSHBUG00000001454	-	98	60.223	ENSHCOG00000012825	-	94	59.615	Hippocampus_comes
ENSHBUG00000001454	-	100	58.392	ENSIPUG00000009469	alyref	99	58.304	Ictalurus_punctatus
ENSHBUG00000001454	-	79	53.488	ENSSTOG00000016570	-	99	46.637	Ictidomys_tridecemlineatus
ENSHBUG00000001454	-	100	64.419	ENSKMAG00000006462	-	100	64.045	Kryptolebias_marmoratus
ENSHBUG00000001454	-	100	55.124	ENSKMAG00000008912	alyref	100	56.429	Kryptolebias_marmoratus
ENSHBUG00000001454	-	98	65.530	ENSLBEG00000012930	-	99	65.660	Labrus_bergylta
ENSHBUG00000001454	-	97	54.198	ENSLBEG00000023118	alyref	88	57.752	Labrus_bergylta
ENSHBUG00000001454	-	100	65.018	ENSLBEG00000005387	-	100	64.664	Labrus_bergylta
ENSHBUG00000001454	-	83	56.306	ENSLOCG00000013879	alyref	88	55.804	Lepisosteus_oculatus
ENSHBUG00000001454	-	100	63.296	ENSMAMG00000005464	-	100	65.169	Mastacembelus_armatus
ENSHBUG00000001454	-	100	55.872	ENSMAMG00000003034	alyref	100	55.714	Mastacembelus_armatus
ENSHBUG00000001454	-	100	53.025	ENSMZEG00005008639	alyref	100	54.577	Maylandia_zebra
ENSHBUG00000001454	-	100	96.981	ENSMZEG00005012096	-	100	96.981	Maylandia_zebra
ENSHBUG00000001454	-	99	54.015	ENSMMOG00000007032	-	100	51.838	Mola_mola
ENSHBUG00000001454	-	98	52.941	ENSMMOG00000012458	alyref	96	55.596	Mola_mola
ENSHBUG00000001454	-	100	68.266	ENSMALG00000006054	-	100	67.778	Monopterus_albus
ENSHBUG00000001454	-	100	47.797	ENSMLUG00000014372	-	100	48.601	Myotis_lucifugus
ENSHBUG00000001454	-	100	49.123	ENSMLUG00000006521	-	100	50.704	Myotis_lucifugus
ENSHBUG00000001454	-	97	46.127	ENSMLUG00000009247	-	98	46.350	Myotis_lucifugus
ENSHBUG00000001454	-	75	52.000	ENSMLUG00000028605	-	98	44.523	Myotis_lucifugus
ENSHBUG00000001454	-	97	45.993	ENSMLUG00000030671	-	68	51.000	Myotis_lucifugus
ENSHBUG00000001454	-	97	44.291	ENSMLUG00000022467	-	70	49.515	Myotis_lucifugus
ENSHBUG00000001454	-	100	49.117	ENSMLUG00000004098	-	100	46.953	Myotis_lucifugus
ENSHBUG00000001454	-	97	44.840	ENSMLUG00000022178	-	69	51.500	Myotis_lucifugus
ENSHBUG00000001454	-	100	52.920	ENSNGAG00000022014	-	100	54.887	Nannospalax_galili
ENSHBUG00000001454	-	100	97.358	ENSNBRG00000017460	-	100	97.358	Neolamprologus_brichardi
ENSHBUG00000001454	-	100	53.004	ENSNBRG00000001747	alyref	100	54.895	Neolamprologus_brichardi
ENSHBUG00000001454	-	100	95.472	ENSONIG00000003296	-	100	95.472	Oreochromis_niloticus
ENSHBUG00000001454	-	100	53.497	ENSONIG00000019434	alyref	100	55.052	Oreochromis_niloticus
ENSHBUG00000001454	-	98	56.169	ENSORLG00000001620	-	88	55.049	Oryzias_latipes
ENSHBUG00000001454	-	99	67.041	ENSORLG00020015673	-	99	63.670	Oryzias_latipes_hni
ENSHBUG00000001454	-	100	50.515	ENSORLG00020011942	alyref	100	54.093	Oryzias_latipes_hni
ENSHBUG00000001454	-	100	50.865	ENSORLG00015022664	alyref	100	53.405	Oryzias_latipes_hsok
ENSHBUG00000001454	-	99	68.539	ENSORLG00015015143	-	99	67.293	Oryzias_latipes_hsok
ENSHBUG00000001454	-	100	65.428	ENSOMEG00000007158	-	99	62.921	Oryzias_melastigma
ENSHBUG00000001454	-	100	53.901	ENSOMEG00000019176	alyref	100	55.357	Oryzias_melastigma
ENSHBUG00000001454	-	72	59.794	ENSPPAG00000036403	-	67	59.896	Pan_paniscus
ENSHBUG00000001454	-	100	55.088	ENSPKIG00000007070	alyref	100	55.439	Paramormyrops_kingsleyae
ENSHBUG00000001454	-	98	56.667	ENSPKIG00000006233	-	80	56.391	Paramormyrops_kingsleyae
ENSHBUG00000001454	-	97	52.837	ENSPMGG00000016600	alyref	89	56.089	Periophthalmus_magnuspinnatus
ENSHBUG00000001454	-	66	61.494	ENSPMGG00000012994	-	93	61.143	Periophthalmus_magnuspinnatus
ENSHBUG00000001454	-	100	52.809	ENSPEMG00000016628	-	100	52.075	Peromyscus_maniculatus_bairdii
ENSHBUG00000001454	-	100	62.172	ENSPFOG00000017094	-	100	62.921	Poecilia_formosa
ENSHBUG00000001454	-	100	54.514	ENSPFOG00000022825	alyref	99	54.355	Poecilia_formosa
ENSHBUG00000001454	-	100	55.052	ENSPLAG00000006948	alyref	100	56.294	Poecilia_latipinna
ENSHBUG00000001454	-	100	62.172	ENSPLAG00000014380	-	100	62.921	Poecilia_latipinna
ENSHBUG00000001454	-	100	62.172	ENSPMEG00000023039	-	100	62.921	Poecilia_mexicana
ENSHBUG00000001454	-	100	54.514	ENSPMEG00000003547	alyref	100	54.355	Poecilia_mexicana
ENSHBUG00000001454	-	100	55.052	ENSPREG00000015795	alyref	100	56.294	Poecilia_reticulata
ENSHBUG00000001454	-	100	61.194	ENSPREG00000003649	-	100	61.940	Poecilia_reticulata
ENSHBUG00000001454	-	98	94.231	ENSPNYG00000002879	-	98	94.231	Pundamilia_nyererei
ENSHBUG00000001454	-	100	53.025	ENSPNYG00000017498	alyref	100	54.577	Pundamilia_nyererei
ENSHBUG00000001454	-	100	51.525	ENSPNAG00000002531	alyref	100	53.425	Pygocentrus_nattereri
ENSHBUG00000001454	-	75	59.204	ENSSBOG00000030924	-	84	58.794	Saimiri_boliviensis_boliviensis
ENSHBUG00000001454	-	99	44.286	ENSSHAG00000012866	-	99	43.431	Sarcophilus_harrisii
ENSHBUG00000001454	-	99	47.148	ENSSHAG00000000609	-	98	41.636	Sarcophilus_harrisii
ENSHBUG00000001454	-	73	60.406	ENSSFOG00015003678	alyref	83	58.974	Scleropages_formosus
ENSHBUG00000001454	-	83	59.459	ENSSFOG00015003923	alyref	72	59.091	Scleropages_formosus
ENSHBUG00000001454	-	100	56.184	ENSSMAG00000009283	alyref	100	56.140	Scophthalmus_maximus
ENSHBUG00000001454	-	100	65.556	ENSSMAG00000011169	-	100	68.148	Scophthalmus_maximus
ENSHBUG00000001454	-	100	54.643	ENSSDUG00000016158	alyref	100	56.028	Seriola_dumerili
ENSHBUG00000001454	-	100	53.901	ENSSLDG00000017803	alyref	100	54.965	Seriola_lalandi_dorsalis
ENSHBUG00000001454	-	98	73.384	ENSSPAG00000017028	-	96	72.519	Stegastes_partitus
ENSHBUG00000001454	-	100	62.409	ENSTRUG00000003051	-	100	60.584	Takifugu_rubripes
ENSHBUG00000001454	-	100	61.338	ENSTNIG00000014136	-	100	56.343	Tetraodon_nigroviridis
ENSHBUG00000001454	-	100	51.246	ENSTNIG00000011595	alyref	100	52.963	Tetraodon_nigroviridis
ENSHBUG00000001454	-	75	59.406	ENSVVUG00000000272	-	82	59.799	Vulpes_vulpes
ENSHBUG00000001454	-	98	52.797	ENSXCOG00000018047	alyref	98	54.610	Xiphophorus_couchianus
ENSHBUG00000001454	-	100	62.172	ENSXMAG00000018086	-	100	62.921	Xiphophorus_maculatus
ENSHBUG00000001454	-	98	52.797	ENSXMAG00000012218	alyref	98	54.610	Xiphophorus_maculatus