EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000001518 (Gene tree)
Gene ID: 102301286
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12280 bases
Position: chrJH425345.1:2147436-2159715
Accession: 102301286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000359	MMR_HSR1	PF01926.23	1e-07	1	1
ENSHBUP00000000387	MMR_HSR1	PF01926.23	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015618	-	2958	XM_005918446	ENSHBUP00000000359	204 (aa)	XP_005918508	UPI0003AF6D46
ENSHBUT00000015621	-	543	-	ENSHBUP00000000387	180 (aa)	-	UPI0003AF93FB

Gene Model

Click here to download ENSHBUG00000001518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000001518	rab18a	79	50.000	ENSHBUG00000002397	-	76	50.000
ENSHBUG00000001518	rab18a	83	38.235	ENSHBUG00000001462	RAB17	74	38.235
ENSHBUG00000001518	rab18a	79	37.952	ENSHBUG00000001595	rab9b	75	37.952
ENSHBUG00000001518	rab18a	80	34.911	ENSHBUG00000012594	RAB29	82	34.911
ENSHBUG00000001518	rab18a	95	44.231	ENSHBUG00000019164	rab2a	97	44.231
ENSHBUG00000001518	rab18a	73	42.667	ENSHBUG00000003230	rab6bb	75	42.667
ENSHBUG00000001518	rab18a	80	43.636	ENSHBUG00000002014	rab5c	83	42.051
ENSHBUG00000001518	rab18a	85	34.091	ENSHBUG00000016064	rab34a	66	34.091
ENSHBUG00000001518	rab18a	79	32.530	ENSHBUG00000001491	dnajc27	62	33.125
ENSHBUG00000001518	rab18a	84	47.674	ENSHBUG00000001416	rab35b	99	43.069
ENSHBUG00000001518	rab18a	80	48.485	ENSHBUG00000022562	-	76	48.485
ENSHBUG00000001518	rab18a	82	44.048	ENSHBUG00000017297	rab15	77	44.048
ENSHBUG00000001518	rab18a	99	85.294	ENSHBUG00000003696	rab18b	99	85.294
ENSHBUG00000001518	rab18a	83	40.116	ENSHBUG00000013570	-	81	40.116
ENSHBUG00000001518	rab18a	71	40.816	ENSHBUG00000007827	zgc:101559	63	40.816
ENSHBUG00000001518	rab18a	80	37.725	ENSHBUG00000010852	RAB7A	81	37.725
ENSHBUG00000001518	rab18a	85	37.853	ENSHBUG00000014023	si:dkey-13a21.4	83	37.853
ENSHBUG00000001518	rab18a	80	37.725	ENSHBUG00000009014	-	81	37.725
ENSHBUG00000001518	rab18a	82	35.294	ENSHBUG00000017973	si:ch73-116o1.2	81	35.294
ENSHBUG00000001518	rab18a	80	39.394	ENSHBUG00000015126	rab42a	62	39.394
ENSHBUG00000001518	rab18a	75	48.387	ENSHBUG00000019261	si:dkey-16l2.16	73	48.387
ENSHBUG00000001518	rab18a	79	36.747	ENSHBUG00000022669	rab9a	82	36.747
ENSHBUG00000001518	rab18a	81	32.530	ENSHBUG00000011998	hrasb	87	32.530
ENSHBUG00000001518	rab18a	84	38.728	ENSHBUG00000003539	RAB39B	81	38.728
ENSHBUG00000001518	rab18a	79	45.679	ENSHBUG00000014777	rab11bb	74	45.679
ENSHBUG00000001518	rab18a	79	43.210	ENSHBUG00000003876	rab25a	77	43.210
ENSHBUG00000001518	rab18a	86	33.520	ENSHBUG00000010964	rabl2	79	33.520
ENSHBUG00000001518	rab18a	82	44.379	ENSHBUG00000009333	rab11al	78	44.379
ENSHBUG00000001518	rab18a	85	33.520	ENSHBUG00000013010	rab32b	82	33.520
ENSHBUG00000001518	rab18a	89	42.308	ENSHBUG00000006823	-	79	42.308
ENSHBUG00000001518	rab18a	95	45.918	ENSHBUG00000010304	rab1ab	96	45.918
ENSHBUG00000001518	rab18a	77	32.716	ENSHBUG00000007788	rheb	85	32.716
ENSHBUG00000001518	rab18a	84	50.867	ENSHBUG00000000993	rab30	78	50.867
ENSHBUG00000001518	rab18a	52	36.111	ENSHBUG00000015310	RAP2B	89	36.975
ENSHBUG00000001518	rab18a	89	30.978	ENSHBUG00000013197	kras	97	30.978
ENSHBUG00000001518	rab18a	87	38.547	ENSHBUG00000000890	rab6a	84	38.547
ENSHBUG00000001518	rab18a	90	40.642	ENSHBUG00000003752	rab5aa	86	40.642
ENSHBUG00000001518	rab18a	80	37.126	ENSHBUG00000009027	-	80	37.126
ENSHBUG00000001518	rab18a	79	45.679	ENSHBUG00000009947	-	74	45.679
ENSHBUG00000001518	rab18a	80	47.561	ENSHBUG00000003728	-	82	47.561
ENSHBUG00000001518	rab18a	79	31.707	ENSHBUG00000011397	si:cabz01085950.1	81	31.707
ENSHBUG00000001518	rab18a	72	41.447	ENSHBUG00000001714	-	63	41.447
ENSHBUG00000001518	rab18a	80	47.273	ENSHBUG00000006056	-	76	47.273
ENSHBUG00000001518	rab18a	74	34.868	ENSHBUG00000018763	rras	83	35.366
ENSHBUG00000001518	rab18a	79	43.210	ENSHBUG00000009320	rab25b	80	43.125
ENSHBUG00000001518	rab18a	78	45.000	ENSHBUG00000023035	rab11a	69	45.000
ENSHBUG00000001518	rab18a	74	40.645	ENSHBUG00000013162	rab33ba	75	40.645
ENSHBUG00000001518	rab18a	79	48.780	ENSHBUG00000008497	rab12	67	48.780
ENSHBUG00000001518	rab18a	75	37.013	ENSHBUG00000007966	rab23	75	37.013
ENSHBUG00000001518	rab18a	80	45.732	ENSHBUG00000017620	-	77	45.732
ENSHBUG00000001518	rab18a	82	41.071	ENSHBUG00000003434	rab22a	69	41.071
ENSHBUG00000001518	rab18a	97	36.364	ENSHBUG00000012905	rab6ba	95	36.364
ENSHBUG00000001518	rab18a	83	39.181	ENSHBUG00000014338	RAB41	79	39.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001518	rab18a	100	98.039	ENSAPOG00000010760	rab18a	100	98.039	Acanthochromis_polyacanthus
ENSHBUG00000001518	rab18a	100	98.333	ENSACIG00000009617	rab18a	100	98.333	Amphilophus_citrinellus
ENSHBUG00000001518	rab18a	100	98.529	ENSAOCG00000016233	rab18a	100	98.529	Amphiprion_ocellaris
ENSHBUG00000001518	rab18a	100	98.529	ENSAPEG00000005392	rab18a	100	98.529	Amphiprion_percula
ENSHBUG00000001518	rab18a	100	96.569	ENSATEG00000021911	rab18a	100	96.569	Anabas_testudineus
ENSHBUG00000001518	rab18a	100	86.341	ENSACAG00000005463	-	100	86.341	Anolis_carolinensis
ENSHBUG00000001518	rab18a	100	100.000	ENSACLG00000011484	rab18a	100	100.000	Astatotilapia_calliptera
ENSHBUG00000001518	rab18a	100	84.466	ENSCPBG00000015839	-	100	84.466	Chrysemys_picta_bellii
ENSHBUG00000001518	rab18a	96	69.652	ENSCPBG00000027619	-	98	69.652	Chrysemys_picta_bellii
ENSHBUG00000001518	rab18a	97	74.372	ENSCING00000006838	-	99	74.372	Ciona_intestinalis
ENSHBUG00000001518	rab18a	97	73.367	ENSCSAVG00000010348	-	99	73.367	Ciona_savignyi
ENSHBUG00000001518	rab18a	100	95.098	ENSCSEG00000011816	rab18a	100	95.098	Cynoglossus_semilaevis
ENSHBUG00000001518	rab18a	96	94.898	ENSCVAG00000015451	rab18a	100	94.608	Cyprinodon_variegatus
ENSHBUG00000001518	rab18a	100	81.951	ENSDARG00000055291	rab18a	100	81.951	Danio_rerio
ENSHBUG00000001518	rab18a	100	91.707	ENSELUG00000003805	rab18a	100	91.707	Esox_lucius
ENSHBUG00000001518	rab18a	100	96.078	ENSFHEG00000019455	rab18a	100	96.078	Fundulus_heteroclitus
ENSHBUG00000001518	rab18a	100	94.608	ENSGAFG00000002790	rab18a	100	94.608	Gambusia_affinis
ENSHBUG00000001518	rab18a	100	84.466	ENSGAGG00000015642	-	100	84.466	Gopherus_agassizii
ENSHBUG00000001518	rab18a	99	97.537	ENSLBEG00000005861	rab18a	95	97.537	Labrus_bergylta
ENSHBUG00000001518	rab18a	93	87.895	ENSLACG00000009310	rab18a	100	85.922	Latimeria_chalumnae
ENSHBUG00000001518	rab18a	100	88.293	ENSLOCG00000007491	rab18a	100	88.293	Lepisosteus_oculatus
ENSHBUG00000001518	rab18a	100	94.608	ENSMAMG00000014320	rab18a	100	94.608	Mastacembelus_armatus
ENSHBUG00000001518	rab18a	100	99.510	ENSMZEG00005017235	rab18a	100	99.510	Maylandia_zebra
ENSHBUG00000001518	rab18a	100	97.059	ENSMALG00000009813	rab18a	100	97.059	Monopterus_albus
ENSHBUG00000001518	rab18a	100	100.000	ENSNBRG00000013507	rab18a	100	100.000	Neolamprologus_brichardi
ENSHBUG00000001518	rab18a	100	96.569	ENSORLG00000004624	rab18a	100	96.569	Oryzias_latipes
ENSHBUG00000001518	rab18a	100	97.059	ENSORLG00020008333	rab18a	100	97.059	Oryzias_latipes_hni
ENSHBUG00000001518	rab18a	100	96.078	ENSORLG00015004739	rab18a	100	96.078	Oryzias_latipes_hsok
ENSHBUG00000001518	rab18a	100	96.569	ENSOMEG00000020605	rab18a	100	96.569	Oryzias_melastigma
ENSHBUG00000001518	rab18a	100	87.317	ENSPKIG00000009825	rab18a	100	87.317	Paramormyrops_kingsleyae
ENSHBUG00000001518	rab18a	100	93.627	ENSPMGG00000020409	-	100	93.627	Periophthalmus_magnuspinnatus
ENSHBUG00000001518	rab18a	100	95.098	ENSPFOG00000007571	rab18a	100	95.098	Poecilia_formosa
ENSHBUG00000001518	rab18a	100	95.098	ENSPLAG00000010104	rab18a	100	95.098	Poecilia_latipinna
ENSHBUG00000001518	rab18a	100	95.098	ENSPMEG00000013085	rab18a	100	95.098	Poecilia_mexicana
ENSHBUG00000001518	rab18a	100	95.098	ENSPREG00000005923	rab18a	83	95.098	Poecilia_reticulata
ENSHBUG00000001518	rab18a	100	100.000	ENSPNYG00000007064	rab18a	100	100.000	Pundamilia_nyererei
ENSHBUG00000001518	rab18a	99	80.597	ENSPNAG00000011548	rab18a	100	80.597	Pygocentrus_nattereri
ENSHBUG00000001518	rab18a	100	90.244	ENSSFOG00015017444	rab18a	84	90.244	Scleropages_formosus
ENSHBUG00000001518	rab18a	94	94.301	ENSSMAG00000002969	rab18a	100	94.146	Scophthalmus_maximus
ENSHBUG00000001518	rab18a	100	96.569	ENSSDUG00000003823	rab18a	100	96.569	Seriola_dumerili
ENSHBUG00000001518	rab18a	100	96.569	ENSSLDG00000006977	rab18a	100	96.569	Seriola_lalandi_dorsalis
ENSHBUG00000001518	rab18a	93	88.360	ENSSPUG00000017677	-	100	85.922	Sphenodon_punctatus
ENSHBUG00000001518	rab18a	100	92.647	ENSTRUG00000004984	rab18a	100	92.647	Takifugu_rubripes
ENSHBUG00000001518	rab18a	100	86.893	ENSUMAG00000015574	-	100	86.893	Ursus_maritimus
ENSHBUG00000001518	rab18a	100	86.408	ENSXETG00000004556	rab18	100	86.893	Xenopus_tropicalis
ENSHBUG00000001518	rab18a	100	95.098	ENSXMAG00000024122	rab18a	100	95.098	Xiphophorus_maculatus