EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000001729 (Gene tree)
Gene ID: 102309175
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 31360 bases
Position: chrJH425759.1:222685-254044
Accession: 102309175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000508	Not1	PF04054.15	3.9e-153	1	1
ENSHBUP00000000523	Not1	PF04054.15	4e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015367	-	6915	XM_014340969	ENSHBUP00000000508	2304 (aa)	XP_014196455	-
ENSHBUT00000015334	-	9978	XM_005945062	ENSHBUP00000000523	2335 (aa)	XP_005945124	UPI0003BD7421

Gene Model

Click here to download ENSHBUG00000001729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001729	cnot1	100	97.055	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSHBUG00000001729	cnot1	100	97.058	ENSAPOG00000005042	cnot1	100	97.058	Acanthochromis_polyacanthus
ENSHBUG00000001729	cnot1	100	97.055	ENSAMEG00000017298	CNOT1	97	97.055	Ailuropoda_melanoleuca
ENSHBUG00000001729	cnot1	90	98.177	ENSACIG00000016003	cnot1	97	98.177	Amphilophus_citrinellus
ENSHBUG00000001729	cnot1	100	94.115	ENSAPEG00000022342	cnot1	100	94.115	Amphiprion_percula
ENSHBUG00000001729	cnot1	100	97.232	ENSATEG00000012892	cnot1	100	97.232	Anabas_testudineus
ENSHBUG00000001729	cnot1	100	96.078	ENSAPLG00000007162	CNOT1	97	97.059	Anas_platyrhynchos
ENSHBUG00000001729	cnot1	90	95.732	ENSACAG00000001602	CNOT1	95	95.732	Anolis_carolinensis
ENSHBUG00000001729	cnot1	100	87.953	ENSANAG00000038198	CNOT1	100	86.203	Aotus_nancymaae
ENSHBUG00000001729	cnot1	100	99.914	ENSACLG00000014234	cnot1	100	99.914	Astatotilapia_calliptera
ENSHBUG00000001729	cnot1	100	94.316	ENSAMXG00000013170	cnot1	100	94.615	Astyanax_mexicanus
ENSHBUG00000001729	cnot1	100	97.055	ENSBTAG00000020782	CNOT1	100	96.407	Bos_taurus
ENSHBUG00000001729	cnot1	76	44.202	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSHBUG00000001729	cnot1	100	97.055	ENSCJAG00000011318	CNOT1	97	97.055	Callithrix_jacchus
ENSHBUG00000001729	cnot1	100	96.100	ENSCAFG00000008426	CNOT1	97	96.100	Canis_familiaris
ENSHBUG00000001729	cnot1	100	94.825	ENSCAFG00020010156	CNOT1	100	93.241	Canis_lupus_dingo
ENSHBUG00000001729	cnot1	100	97.055	ENSCHIG00000010452	CNOT1	97	97.055	Capra_hircus
ENSHBUG00000001729	cnot1	100	97.055	ENSTSYG00000006888	CNOT1	97	97.055	Carlito_syrichta
ENSHBUG00000001729	cnot1	100	97.195	ENSCPOG00000013026	CNOT1	97	97.195	Cavia_porcellus
ENSHBUG00000001729	cnot1	100	97.055	ENSCCAG00000026333	CNOT1	97	97.055	Cebus_capucinus
ENSHBUG00000001729	cnot1	100	97.055	ENSCATG00000032625	CNOT1	97	97.055	Cercocebus_atys
ENSHBUG00000001729	cnot1	100	97.195	ENSCLAG00000006289	CNOT1	97	97.195	Chinchilla_lanigera
ENSHBUG00000001729	cnot1	100	97.055	ENSCSAG00000004731	CNOT1	97	97.055	Chlorocebus_sabaeus
ENSHBUG00000001729	cnot1	81	97.727	ENSCHOG00000009712	CNOT1	82	97.527	Choloepus_hoffmanni
ENSHBUG00000001729	cnot1	98	96.914	ENSCPBG00000026222	CNOT1	98	95.842	Chrysemys_picta_bellii
ENSHBUG00000001729	cnot1	100	56.877	ENSCING00000009149	-	100	57.013	Ciona_intestinalis
ENSHBUG00000001729	cnot1	89	77.019	ENSCSAVG00000002414	-	97	77.019	Ciona_savignyi
ENSHBUG00000001729	cnot1	100	96.111	ENSCANG00000040534	CNOT1	97	96.111	Colobus_angolensis_palliatus
ENSHBUG00000001729	cnot1	100	96.914	ENSCGRG00001016365	Cnot1	97	96.914	Cricetulus_griseus_chok1gshd
ENSHBUG00000001729	cnot1	100	96.914	ENSCGRG00000001714	Cnot1	97	96.914	Cricetulus_griseus_crigri
ENSHBUG00000001729	cnot1	97	99.158	ENSCVAG00000018930	cnot1	100	99.158	Cyprinodon_variegatus
ENSHBUG00000001729	cnot1	100	92.107	ENSDARG00000004174	cnot1	100	91.772	Danio_rerio
ENSHBUG00000001729	cnot1	100	94.258	ENSDNOG00000013250	CNOT1	97	94.258	Dasypus_novemcinctus
ENSHBUG00000001729	cnot1	99	46.072	FBgn0085436	Not1	99	47.671	Drosophila_melanogaster
ENSHBUG00000001729	cnot1	86	94.880	ENSETEG00000012806	CNOT1	84	94.880	Echinops_telfairi
ENSHBUG00000001729	cnot1	83	76.042	ENSEBUG00000011534	cnot1	95	76.042	Eptatretus_burgeri
ENSHBUG00000001729	cnot1	100	97.055	ENSEASG00005005819	CNOT1	100	96.407	Equus_asinus_asinus
ENSHBUG00000001729	cnot1	100	97.055	ENSECAG00000009889	CNOT1	97	97.055	Equus_caballus
ENSHBUG00000001729	cnot1	87	98.667	ENSEEUG00000006015	CNOT1	85	98.667	Erinaceus_europaeus
ENSHBUG00000001729	cnot1	100	96.866	ENSELUG00000014085	cnot1	97	96.866	Esox_lucius
ENSHBUG00000001729	cnot1	100	96.111	ENSFCAG00000025155	CNOT1	97	97.055	Felis_catus
ENSHBUG00000001729	cnot1	100	97.055	ENSFALG00000007285	CNOT1	97	97.055	Ficedula_albicollis
ENSHBUG00000001729	cnot1	100	97.195	ENSFDAG00000013399	CNOT1	97	97.195	Fukomys_damarensis
ENSHBUG00000001729	cnot1	100	93.501	ENSFHEG00000020574	cnot1	100	93.459	Fundulus_heteroclitus
ENSHBUG00000001729	cnot1	90	99.385	ENSGMOG00000012864	cnot1	99	99.385	Gadus_morhua
ENSHBUG00000001729	cnot1	100	97.055	ENSGALG00000002301	CNOT1	97	97.055	Gallus_gallus
ENSHBUG00000001729	cnot1	100	99.018	ENSGAFG00000015005	cnot1	97	99.018	Gambusia_affinis
ENSHBUG00000001729	cnot1	90	94.159	ENSGACG00000002606	cnot1	100	99.394	Gasterosteus_aculeatus
ENSHBUG00000001729	cnot1	100	96.914	ENSGAGG00000022646	CNOT1	97	96.914	Gopherus_agassizii
ENSHBUG00000001729	cnot1	100	97.055	ENSGGOG00000009547	CNOT1	97	97.055	Gorilla_gorilla
ENSHBUG00000001729	cnot1	100	97.195	ENSHGLG00000014322	CNOT1	97	97.195	Heterocephalus_glaber_female
ENSHBUG00000001729	cnot1	100	93.210	ENSHCOG00000006501	cnot1	100	93.210	Hippocampus_comes
ENSHBUG00000001729	cnot1	100	90.562	ENSIPUG00000011915	cnot1	100	90.562	Ictalurus_punctatus
ENSHBUG00000001729	cnot1	100	97.195	ENSSTOG00000005490	CNOT1	97	97.195	Ictidomys_tridecemlineatus
ENSHBUG00000001729	cnot1	100	96.494	ENSJJAG00000000633	Cnot1	97	96.494	Jaculus_jaculus
ENSHBUG00000001729	cnot1	100	94.167	ENSKMAG00000006149	cnot1	100	94.419	Kryptolebias_marmoratus
ENSHBUG00000001729	cnot1	95	98.802	ENSLBEG00000004740	cnot1	100	98.802	Labrus_bergylta
ENSHBUG00000001729	cnot1	100	97.055	ENSLACG00000010869	CNOT1	99	97.055	Latimeria_chalumnae
ENSHBUG00000001729	cnot1	100	99.439	ENSLOCG00000006324	cnot1	97	99.439	Lepisosteus_oculatus
ENSHBUG00000001729	cnot1	100	96.914	ENSLAFG00000000098	CNOT1	97	96.914	Loxodonta_africana
ENSHBUG00000001729	cnot1	100	97.055	ENSMFAG00000035888	CNOT1	97	97.055	Macaca_fascicularis
ENSHBUG00000001729	cnot1	100	97.055	ENSMMUG00000014625	CNOT1	97	97.055	Macaca_mulatta
ENSHBUG00000001729	cnot1	100	96.111	ENSMNEG00000031820	CNOT1	97	97.055	Macaca_nemestrina
ENSHBUG00000001729	cnot1	100	92.500	ENSMLEG00000040933	CNOT1	97	92.500	Mandrillus_leucophaeus
ENSHBUG00000001729	cnot1	100	92.140	ENSMAMG00000016524	cnot1	100	92.308	Mastacembelus_armatus
ENSHBUG00000001729	cnot1	100	97.835	ENSMZEG00005016210	cnot1	100	97.835	Maylandia_zebra
ENSHBUG00000001729	cnot1	100	97.055	ENSMGAG00000001908	CNOT1	97	97.055	Meleagris_gallopavo
ENSHBUG00000001729	cnot1	100	97.055	ENSMICG00000007071	CNOT1	97	97.055	Microcebus_murinus
ENSHBUG00000001729	cnot1	100	96.914	ENSMOCG00000017969	Cnot1	97	96.914	Microtus_ochrogaster
ENSHBUG00000001729	cnot1	100	95.803	ENSMMOG00000019134	cnot1	100	95.803	Mola_mola
ENSHBUG00000001729	cnot1	100	96.078	ENSMODG00000014199	CNOT1	97	97.059	Monodelphis_domestica
ENSHBUG00000001729	cnot1	100	92.896	ENSMALG00000008645	cnot1	100	92.896	Monopterus_albus
ENSHBUG00000001729	cnot1	98	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	Mus_caroli
ENSHBUG00000001729	cnot1	100	96.914	ENSMUSG00000036550	Cnot1	97	96.914	Mus_musculus
ENSHBUG00000001729	cnot1	100	96.914	MGP_PahariEiJ_G0023028	Cnot1	97	96.914	Mus_pahari
ENSHBUG00000001729	cnot1	100	96.914	MGP_SPRETEiJ_G0032549	Cnot1	97	96.914	Mus_spretus
ENSHBUG00000001729	cnot1	100	97.055	ENSMPUG00000004830	CNOT1	97	97.055	Mustela_putorius_furo
ENSHBUG00000001729	cnot1	100	96.914	ENSMLUG00000003728	CNOT1	97	96.914	Myotis_lucifugus
ENSHBUG00000001729	cnot1	100	97.055	ENSNGAG00000018628	Cnot1	97	97.055	Nannospalax_galili
ENSHBUG00000001729	cnot1	97	96.535	ENSNBRG00000019358	cnot1	100	96.535	Neolamprologus_brichardi
ENSHBUG00000001729	cnot1	100	97.055	ENSNLEG00000003566	CNOT1	97	97.055	Nomascus_leucogenys
ENSHBUG00000001729	cnot1	87	91.723	ENSMEUG00000006145	CNOT1	88	90.972	Notamacropus_eugenii
ENSHBUG00000001729	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	84	97.778	Ochotona_princeps
ENSHBUG00000001729	cnot1	100	97.195	ENSODEG00000016337	CNOT1	97	97.195	Octodon_degus
ENSHBUG00000001729	cnot1	100	97.769	ENSONIG00000007358	cnot1	100	97.769	Oreochromis_niloticus
ENSHBUG00000001729	cnot1	90	96.107	ENSOANG00000012109	CNOT1	97	96.774	Ornithorhynchus_anatinus
ENSHBUG00000001729	cnot1	100	97.055	ENSOCUG00000006911	CNOT1	97	97.055	Oryctolagus_cuniculus
ENSHBUG00000001729	cnot1	100	93.711	ENSORLG00000013734	cnot1	100	93.627	Oryzias_latipes
ENSHBUG00000001729	cnot1	100	91.978	ENSORLG00020017012	cnot1	100	91.894	Oryzias_latipes_hni
ENSHBUG00000001729	cnot1	100	91.852	ENSORLG00015007091	cnot1	100	91.768	Oryzias_latipes_hsok
ENSHBUG00000001729	cnot1	100	90.955	ENSOMEG00000015124	cnot1	100	91.321	Oryzias_melastigma
ENSHBUG00000001729	cnot1	100	97.055	ENSOGAG00000000543	CNOT1	97	97.055	Otolemur_garnettii
ENSHBUG00000001729	cnot1	100	97.055	ENSOARG00000001567	CNOT1	97	97.055	Ovis_aries
ENSHBUG00000001729	cnot1	100	97.055	ENSPPAG00000022013	CNOT1	97	97.055	Pan_paniscus
ENSHBUG00000001729	cnot1	100	97.055	ENSPPRG00000004867	CNOT1	97	97.055	Panthera_pardus
ENSHBUG00000001729	cnot1	100	97.055	ENSPTIG00000012589	CNOT1	97	97.055	Panthera_tigris_altaica
ENSHBUG00000001729	cnot1	100	96.111	ENSPTRG00000008183	CNOT1	97	96.111	Pan_troglodytes
ENSHBUG00000001729	cnot1	100	86.026	ENSPANG00000020901	CNOT1	100	86.513	Papio_anubis
ENSHBUG00000001729	cnot1	100	98.457	ENSPKIG00000023538	CNOT1	97	98.457	Paramormyrops_kingsleyae
ENSHBUG00000001729	cnot1	99	88.836	ENSPKIG00000002914	CNOT1	99	88.778	Paramormyrops_kingsleyae
ENSHBUG00000001729	cnot1	100	97.055	ENSPSIG00000005499	CNOT1	97	97.055	Pelodiscus_sinensis
ENSHBUG00000001729	cnot1	100	78.159	ENSPMAG00000009381	cnot1	100	78.159	Petromyzon_marinus
ENSHBUG00000001729	cnot1	100	97.195	ENSPCIG00000007343	CNOT1	100	96.607	Phascolarctos_cinereus
ENSHBUG00000001729	cnot1	99	93.644	ENSPFOG00000003497	cnot1	100	93.644	Poecilia_formosa
ENSHBUG00000001729	cnot1	95	98.204	ENSPLAG00000014018	cnot1	100	98.204	Poecilia_latipinna
ENSHBUG00000001729	cnot1	95	98.204	ENSPMEG00000005868	cnot1	100	98.204	Poecilia_mexicana
ENSHBUG00000001729	cnot1	95	98.204	ENSPREG00000018793	cnot1	100	98.204	Poecilia_reticulata
ENSHBUG00000001729	cnot1	100	97.055	ENSPPYG00000007410	CNOT1	97	97.055	Pongo_abelii
ENSHBUG00000001729	cnot1	88	93.662	ENSPCAG00000003241	CNOT1	86	93.662	Procavia_capensis
ENSHBUG00000001729	cnot1	100	96.111	ENSPCOG00000027139	CNOT1	97	96.111	Propithecus_coquereli
ENSHBUG00000001729	cnot1	100	89.762	ENSPVAG00000004243	CNOT1	97	89.762	Pteropus_vampyrus
ENSHBUG00000001729	cnot1	100	99.957	ENSPNYG00000012919	cnot1	100	99.957	Pundamilia_nyererei
ENSHBUG00000001729	cnot1	100	91.544	ENSPNAG00000000246	cnot1	100	91.544	Pygocentrus_nattereri
ENSHBUG00000001729	cnot1	100	96.774	ENSRNOG00000012271	Cnot1	97	96.774	Rattus_norvegicus
ENSHBUG00000001729	cnot1	100	96.111	ENSRBIG00000044598	CNOT1	97	96.111	Rhinopithecus_bieti
ENSHBUG00000001729	cnot1	100	97.055	ENSRROG00000000906	CNOT1	97	97.055	Rhinopithecus_roxellana
ENSHBUG00000001729	cnot1	100	92.287	ENSSBOG00000029155	CNOT1	97	92.287	Saimiri_boliviensis_boliviensis
ENSHBUG00000001729	cnot1	100	97.195	ENSSHAG00000012187	CNOT1	97	97.195	Sarcophilus_harrisii
ENSHBUG00000001729	cnot1	100	92.847	ENSSFOG00015017614	cnot1	100	90.000	Scleropages_formosus
ENSHBUG00000001729	cnot1	100	96.319	ENSSMAG00000013844	cnot1	100	96.319	Scophthalmus_maximus
ENSHBUG00000001729	cnot1	100	96.972	ENSSDUG00000021491	cnot1	100	96.972	Seriola_dumerili
ENSHBUG00000001729	cnot1	100	97.189	ENSSLDG00000014816	cnot1	100	97.189	Seriola_lalandi_dorsalis
ENSHBUG00000001729	cnot1	86	97.800	ENSSARG00000000762	CNOT1	88	97.800	Sorex_araneus
ENSHBUG00000001729	cnot1	100	94.073	ENSSPAG00000018802	cnot1	100	94.073	Stegastes_partitus
ENSHBUG00000001729	cnot1	100	96.914	ENSSSCG00000002799	CNOT1	100	96.407	Sus_scrofa
ENSHBUG00000001729	cnot1	100	97.055	ENSTGUG00000005919	CNOT1	97	97.055	Taeniopygia_guttata
ENSHBUG00000001729	cnot1	100	99.018	ENSTNIG00000018706	cnot1	97	99.018	Tetraodon_nigroviridis
ENSHBUG00000001729	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSHBUG00000001729	cnot1	95	97.055	ENSTTRG00000008460	CNOT1	92	97.055	Tursiops_truncatus
ENSHBUG00000001729	cnot1	100	97.055	ENSUAMG00000009251	CNOT1	97	97.055	Ursus_americanus
ENSHBUG00000001729	cnot1	100	97.055	ENSUMAG00000021291	CNOT1	97	97.055	Ursus_maritimus
ENSHBUG00000001729	cnot1	97	93.689	ENSVPAG00000008846	CNOT1	97	92.524	Vicugna_pacos
ENSHBUG00000001729	cnot1	100	94.825	ENSVVUG00000024037	CNOT1	100	93.241	Vulpes_vulpes
ENSHBUG00000001729	cnot1	100	89.356	ENSXETG00000015900	cnot1	97	89.356	Xenopus_tropicalis
ENSHBUG00000001729	cnot1	100	92.641	ENSXCOG00000013552	cnot1	100	92.641	Xiphophorus_couchianus
ENSHBUG00000001729	cnot1	100	92.683	ENSXMAG00000006031	cnot1	100	92.683	Xiphophorus_maculatus