EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000001760 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3539 bases
Position: chrJH425362.1:2064490-2068028
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000021825	Sua5_yciO_yrdC	PF01300.18	2.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015243	-	2631	-	ENSHBUP00000021825	877 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000001760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000001760	si:ch211-153b23.3	56	32.821	ENSHBUG00000000013	si:ch211-153b23.4	65	32.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001760	si:ch211-153b23.3	58	31.407	ENSAPOG00000006178	si:ch211-153b23.4	59	31.407	Acanthochromis_polyacanthus
ENSHBUG00000001760	si:ch211-153b23.3	58	31.407	ENSAPOG00000006144	si:ch211-153b23.4	60	31.407	Acanthochromis_polyacanthus
ENSHBUG00000001760	si:ch211-153b23.3	100	73.409	ENSACIG00000006968	si:ch211-153b23.3	100	73.182	Amphilophus_citrinellus
ENSHBUG00000001760	si:ch211-153b23.3	100	82.366	ENSAOCG00000010974	si:ch211-153b23.3	100	82.366	Amphiprion_ocellaris
ENSHBUG00000001760	si:ch211-153b23.3	56	31.412	ENSAOCG00000010999	si:ch211-153b23.4	61	31.412	Amphiprion_ocellaris
ENSHBUG00000001760	si:ch211-153b23.3	56	31.890	ENSAPEG00000014665	si:ch211-153b23.4	60	31.890	Amphiprion_percula
ENSHBUG00000001760	si:ch211-153b23.3	100	82.594	ENSAPEG00000014700	si:ch211-153b23.3	100	82.594	Amphiprion_percula
ENSHBUG00000001760	si:ch211-153b23.3	57	32.122	ENSATEG00000004948	si:ch211-153b23.4	59	32.122	Anabas_testudineus
ENSHBUG00000001760	si:ch211-153b23.3	100	81.087	ENSATEG00000004956	si:ch211-153b23.3	99	81.087	Anabas_testudineus
ENSHBUG00000001760	si:ch211-153b23.3	59	33.766	ENSACLG00000005471	si:ch211-153b23.4	58	33.766	Astatotilapia_calliptera
ENSHBUG00000001760	si:ch211-153b23.3	100	99.430	ENSACLG00000005894	si:ch211-153b23.3	100	99.430	Astatotilapia_calliptera
ENSHBUG00000001760	si:ch211-153b23.3	100	70.501	ENSAMXG00000038564	si:ch211-153b23.3	99	70.501	Astyanax_mexicanus
ENSHBUG00000001760	si:ch211-153b23.3	59	32.576	ENSAMXG00000013879	si:ch211-153b23.4	61	32.576	Astyanax_mexicanus
ENSHBUG00000001760	si:ch211-153b23.3	99	77.299	ENSCSEG00000014853	si:ch211-153b23.3	100	77.299	Cynoglossus_semilaevis
ENSHBUG00000001760	si:ch211-153b23.3	100	79.909	ENSCVAG00000021124	si:ch211-153b23.3	100	79.909	Cyprinodon_variegatus
ENSHBUG00000001760	si:ch211-153b23.3	57	33.143	ENSCVAG00000021145	si:ch211-153b23.4	64	33.333	Cyprinodon_variegatus
ENSHBUG00000001760	si:ch211-153b23.3	59	33.771	ENSDARG00000077169	si:ch211-153b23.4	59	33.585	Danio_rerio
ENSHBUG00000001760	si:ch211-153b23.3	100	70.707	ENSDARG00000104919	si:ch211-153b23.3	99	70.819	Danio_rerio
ENSHBUG00000001760	si:ch211-153b23.3	80	88.073	ENSELUG00000004912	si:ch211-153b23.3	99	88.073	Esox_lucius
ENSHBUG00000001760	si:ch211-153b23.3	57	32.190	ENSFALG00000011343	-	59	32.190	Ficedula_albicollis
ENSHBUG00000001760	si:ch211-153b23.3	71	30.298	ENSFHEG00000010001	si:ch211-153b23.4	77	30.455	Fundulus_heteroclitus
ENSHBUG00000001760	si:ch211-153b23.3	100	80.952	ENSFHEG00000010030	si:ch211-153b23.3	99	80.952	Fundulus_heteroclitus
ENSHBUG00000001760	si:ch211-153b23.3	100	80.136	ENSGAFG00000007455	si:ch211-153b23.3	99	80.136	Gambusia_affinis
ENSHBUG00000001760	si:ch211-153b23.3	59	32.514	ENSGACG00000018253	si:ch211-153b23.4	60	32.514	Gasterosteus_aculeatus
ENSHBUG00000001760	si:ch211-153b23.3	100	70.635	ENSIPUG00000015213	si:ch211-153b23.3	99	70.635	Ictalurus_punctatus
ENSHBUG00000001760	si:ch211-153b23.3	99	79.432	ENSKMAG00000006792	si:ch211-153b23.3	99	79.432	Kryptolebias_marmoratus
ENSHBUG00000001760	si:ch211-153b23.3	58	33.333	ENSKMAG00000006829	si:ch211-153b23.4	63	33.270	Kryptolebias_marmoratus
ENSHBUG00000001760	si:ch211-153b23.3	59	33.208	ENSKMAG00000006919	-	59	33.208	Kryptolebias_marmoratus
ENSHBUG00000001760	si:ch211-153b23.3	100	80.682	ENSLBEG00000026324	si:ch211-153b23.3	99	80.682	Labrus_bergylta
ENSHBUG00000001760	si:ch211-153b23.3	94	57.619	ENSLACG00000005800	-	99	57.262	Latimeria_chalumnae
ENSHBUG00000001760	si:ch211-153b23.3	84	62.500	ENSLOCG00000015063	si:ch211-153b23.3	98	62.500	Lepisosteus_oculatus
ENSHBUG00000001760	si:ch211-153b23.3	100	80.068	ENSMAMG00000009328	si:ch211-153b23.3	100	80.068	Mastacembelus_armatus
ENSHBUG00000001760	si:ch211-153b23.3	59	32.576	ENSMAMG00000009277	si:ch211-153b23.4	62	32.576	Mastacembelus_armatus
ENSHBUG00000001760	si:ch211-153b23.3	59	32.319	ENSMAMG00000009358	si:ch211-153b23.4	63	32.319	Mastacembelus_armatus
ENSHBUG00000001760	si:ch211-153b23.3	59	33.581	ENSMZEG00005011433	si:ch211-153b23.4	63	33.272	Maylandia_zebra
ENSHBUG00000001760	si:ch211-153b23.3	100	99.202	ENSMZEG00005011450	si:ch211-153b23.3	100	99.202	Maylandia_zebra
ENSHBUG00000001760	si:ch211-153b23.3	100	80.182	ENSMMOG00000004436	si:ch211-153b23.3	99	80.182	Mola_mola
ENSHBUG00000001760	si:ch211-153b23.3	59	33.088	ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	Neolamprologus_brichardi
ENSHBUG00000001760	si:ch211-153b23.3	100	99.088	ENSNBRG00000013370	si:ch211-153b23.3	100	99.088	Neolamprologus_brichardi
ENSHBUG00000001760	si:ch211-153b23.3	59	33.581	ENSONIG00000017875	si:ch211-153b23.4	59	33.581	Oreochromis_niloticus
ENSHBUG00000001760	si:ch211-153b23.3	100	77.903	ENSORLG00000006161	si:ch211-153b23.3	99	77.903	Oryzias_latipes
ENSHBUG00000001760	si:ch211-153b23.3	97	78.923	ENSORLG00020000910	si:ch211-153b23.3	100	78.923	Oryzias_latipes_hni
ENSHBUG00000001760	si:ch211-153b23.3	97	78.154	ENSORLG00015003698	si:ch211-153b23.3	100	78.154	Oryzias_latipes_hsok
ENSHBUG00000001760	si:ch211-153b23.3	100	78.781	ENSOMEG00000007661	si:ch211-153b23.3	99	78.894	Oryzias_melastigma
ENSHBUG00000001760	si:ch211-153b23.3	99	50.275	ENSPKIG00000021029	-	99	50.386	Paramormyrops_kingsleyae
ENSHBUG00000001760	si:ch211-153b23.3	97	71.329	ENSPKIG00000022450	si:ch211-153b23.3	100	71.329	Paramormyrops_kingsleyae
ENSHBUG00000001760	si:ch211-153b23.3	82	77.551	ENSPMGG00000001311	si:ch211-153b23.3	99	77.551	Periophthalmus_magnuspinnatus
ENSHBUG00000001760	si:ch211-153b23.3	100	80.315	ENSPFOG00000012289	si:ch211-153b23.3	99	80.068	Poecilia_formosa
ENSHBUG00000001760	si:ch211-153b23.3	59	32.772	ENSPFOG00000012164	si:ch211-153b23.4	73	33.209	Poecilia_formosa
ENSHBUG00000001760	si:ch211-153b23.3	99	81.023	ENSPLAG00000016320	si:ch211-153b23.3	100	81.023	Poecilia_latipinna
ENSHBUG00000001760	si:ch211-153b23.3	58	32.700	ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	Poecilia_mexicana
ENSHBUG00000001760	si:ch211-153b23.3	100	81.293	ENSPMEG00000008884	si:ch211-153b23.3	99	81.044	Poecilia_mexicana
ENSHBUG00000001760	si:ch211-153b23.3	100	99.772	ENSPNYG00000000251	si:ch211-153b23.3	100	99.772	Pundamilia_nyererei
ENSHBUG00000001760	si:ch211-153b23.3	59	33.581	ENSPNYG00000000250	si:ch211-153b23.4	63	33.272	Pundamilia_nyererei
ENSHBUG00000001760	si:ch211-153b23.3	100	71.429	ENSPNAG00000019592	si:ch211-153b23.3	99	71.429	Pygocentrus_nattereri
ENSHBUG00000001760	si:ch211-153b23.3	100	72.022	ENSSFOG00015010910	si:ch211-153b23.3	99	72.022	Scleropages_formosus
ENSHBUG00000001760	si:ch211-153b23.3	68	49.839	ENSSFOG00015009030	-	96	49.839	Scleropages_formosus
ENSHBUG00000001760	si:ch211-153b23.3	99	81.777	ENSSMAG00000005446	si:ch211-153b23.3	100	81.777	Scophthalmus_maximus
ENSHBUG00000001760	si:ch211-153b23.3	59	32.448	ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	Seriola_dumerili
ENSHBUG00000001760	si:ch211-153b23.3	100	81.087	ENSSLDG00000008629	si:ch211-153b23.3	100	81.087	Seriola_lalandi_dorsalis
ENSHBUG00000001760	si:ch211-153b23.3	99	75.400	ENSTRUG00000020530	si:ch211-153b23.3	100	75.858	Takifugu_rubripes
ENSHBUG00000001760	si:ch211-153b23.3	93	81.579	ENSTNIG00000008962	si:ch211-153b23.3	99	81.579	Tetraodon_nigroviridis
ENSHBUG00000001760	si:ch211-153b23.3	59	32.008	ENSXMAG00000021388	si:ch211-153b23.4	62	32.765	Xiphophorus_maculatus
ENSHBUG00000001760	si:ch211-153b23.3	100	81.093	ENSXMAG00000029318	si:ch211-153b23.3	99	81.093	Xiphophorus_maculatus