EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000001904 (Gene tree)
Gene ID: 102304150
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 19119 bases
Position: chrJH425400.1:836093-855211
Accession: 102304150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000021953	Npa1	PF11707.8	1.6e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000015005	-	9567	XM_005926474	ENSHBUP00000021953	2255 (aa)	XP_005926536	UPI0003BDCA4B

Gene Model

Click here to download ENSHBUG00000001904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001904	urb1	99	45.055	ENSG00000142207	URB1	99	45.077	Homo_sapiens
ENSHBUG00000001904	urb1	100	74.447	ENSAPOG00000020308	urb1	99	76.425	Acanthochromis_polyacanthus
ENSHBUG00000001904	urb1	99	44.638	ENSAMEG00000011998	URB1	99	45.007	Ailuropoda_melanoleuca
ENSHBUG00000001904	urb1	98	79.936	ENSACIG00000003248	urb1	99	79.936	Amphilophus_citrinellus
ENSHBUG00000001904	urb1	100	69.982	ENSAOCG00000010364	urb1	100	70.026	Amphiprion_ocellaris
ENSHBUG00000001904	urb1	97	77.505	ENSAPEG00000010758	urb1	99	77.505	Amphiprion_percula
ENSHBUG00000001904	urb1	100	74.663	ENSATEG00000011790	urb1	100	74.663	Anabas_testudineus
ENSHBUG00000001904	urb1	97	46.470	ENSAPLG00000012791	URB1	99	46.515	Anas_platyrhynchos
ENSHBUG00000001904	urb1	99	44.965	ENSACAG00000002817	URB1	97	45.539	Anolis_carolinensis
ENSHBUG00000001904	urb1	99	44.958	ENSANAG00000024617	URB1	99	44.832	Aotus_nancymaae
ENSHBUG00000001904	urb1	100	99.290	ENSACLG00000024865	urb1	100	99.290	Astatotilapia_calliptera
ENSHBUG00000001904	urb1	99	48.968	ENSAMXG00000012306	urb1	99	48.968	Astyanax_mexicanus
ENSHBUG00000001904	urb1	99	43.892	ENSBTAG00000012412	URB1	99	44.400	Bos_taurus
ENSHBUG00000001904	urb1	99	44.932	ENSCJAG00000009118	URB1	99	44.768	Callithrix_jacchus
ENSHBUG00000001904	urb1	99	43.837	ENSCAFG00000008892	URB1	99	43.837	Canis_familiaris
ENSHBUG00000001904	urb1	99	43.617	ENSCAFG00020025987	-	99	43.912	Canis_lupus_dingo
ENSHBUG00000001904	urb1	99	43.230	ENSCAFG00020025994	-	99	43.230	Canis_lupus_dingo
ENSHBUG00000001904	urb1	99	43.965	ENSCHIG00000015645	URB1	99	44.195	Capra_hircus
ENSHBUG00000001904	urb1	100	44.623	ENSTSYG00000013286	URB1	99	44.532	Carlito_syrichta
ENSHBUG00000001904	urb1	98	43.176	ENSCAPG00000015589	URB1	99	43.170	Cavia_aperea
ENSHBUG00000001904	urb1	100	43.753	ENSCPOG00000006748	URB1	99	43.747	Cavia_porcellus
ENSHBUG00000001904	urb1	99	44.982	ENSCCAG00000021299	URB1	99	45.154	Cebus_capucinus
ENSHBUG00000001904	urb1	100	45.146	ENSCATG00000042630	URB1	99	45.276	Cercocebus_atys
ENSHBUG00000001904	urb1	100	44.919	ENSCLAG00000005262	URB1	99	45.258	Chinchilla_lanigera
ENSHBUG00000001904	urb1	100	44.333	ENSCSAG00000009584	URB1	99	44.464	Chlorocebus_sabaeus
ENSHBUG00000001904	urb1	99	47.453	ENSCPBG00000006454	URB1	99	47.753	Chrysemys_picta_bellii
ENSHBUG00000001904	urb1	100	45.020	ENSCANG00000031088	URB1	99	45.150	Colobus_angolensis_palliatus
ENSHBUG00000001904	urb1	99	44.846	ENSCGRG00001010616	Urb1	99	44.701	Cricetulus_griseus_chok1gshd
ENSHBUG00000001904	urb1	98	44.973	ENSCGRG00000015840	Urb1	99	44.969	Cricetulus_griseus_crigri
ENSHBUG00000001904	urb1	100	66.183	ENSCSEG00000012616	urb1	99	66.183	Cynoglossus_semilaevis
ENSHBUG00000001904	urb1	93	71.429	ENSCVAG00000009076	urb1	98	73.376	Cyprinodon_variegatus
ENSHBUG00000001904	urb1	99	53.616	ENSDARG00000060308	urb1	99	53.616	Danio_rerio
ENSHBUG00000001904	urb1	85	47.739	ENSDNOG00000015586	URB1	99	47.739	Dasypus_novemcinctus
ENSHBUG00000001904	urb1	99	44.802	ENSDORG00000006735	Urb1	99	45.079	Dipodomys_ordii
ENSHBUG00000001904	urb1	85	52.727	ENSETEG00000009080	URB1	85	52.727	Echinops_telfairi
ENSHBUG00000001904	urb1	99	43.750	ENSEASG00005007711	URB1	99	44.023	Equus_asinus_asinus
ENSHBUG00000001904	urb1	95	55.846	ENSECAG00000013206	URB1	99	55.846	Equus_caballus
ENSHBUG00000001904	urb1	99	56.516	ENSELUG00000020516	urb1	99	56.692	Esox_lucius
ENSHBUG00000001904	urb1	99	44.154	ENSFCAG00000002177	URB1	99	44.342	Felis_catus
ENSHBUG00000001904	urb1	97	42.946	ENSFALG00000004636	URB1	98	43.086	Ficedula_albicollis
ENSHBUG00000001904	urb1	99	45.194	ENSFDAG00000007288	URB1	95	44.885	Fukomys_damarensis
ENSHBUG00000001904	urb1	100	65.154	ENSFHEG00000000202	urb1	99	68.541	Fundulus_heteroclitus
ENSHBUG00000001904	urb1	93	57.716	ENSGMOG00000001838	urb1	94	57.716	Gadus_morhua
ENSHBUG00000001904	urb1	99	46.631	ENSGALG00000015887	URB1	99	46.764	Gallus_gallus
ENSHBUG00000001904	urb1	96	70.651	ENSGAFG00000020694	urb1	99	70.651	Gambusia_affinis
ENSHBUG00000001904	urb1	99	73.120	ENSGACG00000011703	urb1	99	73.031	Gasterosteus_aculeatus
ENSHBUG00000001904	urb1	99	47.064	ENSGAGG00000022544	URB1	99	47.315	Gopherus_agassizii
ENSHBUG00000001904	urb1	99	44.978	ENSGGOG00000000285	URB1	99	45.146	Gorilla_gorilla
ENSHBUG00000001904	urb1	99	43.632	ENSHGLG00000004907	URB1	99	43.626	Heterocephalus_glaber_female
ENSHBUG00000001904	urb1	99	43.897	ENSHGLG00100010749	URB1	99	43.892	Heterocephalus_glaber_male
ENSHBUG00000001904	urb1	74	77.419	ENSHCOG00000018683	urb1	99	77.419	Hippocampus_comes
ENSHBUG00000001904	urb1	99	49.146	ENSIPUG00000014721	urb1	99	49.233	Ictalurus_punctatus
ENSHBUG00000001904	urb1	99	44.808	ENSSTOG00000004539	URB1	99	44.694	Ictidomys_tridecemlineatus
ENSHBUG00000001904	urb1	99	66.799	ENSKMAG00000006001	urb1	99	72.678	Kryptolebias_marmoratus
ENSHBUG00000001904	urb1	95	73.319	ENSLBEG00000027208	urb1	99	73.319	Labrus_bergylta
ENSHBUG00000001904	urb1	99	44.890	ENSLACG00000017059	URB1	99	45.240	Latimeria_chalumnae
ENSHBUG00000001904	urb1	99	53.497	ENSLOCG00000009190	urb1	98	53.986	Lepisosteus_oculatus
ENSHBUG00000001904	urb1	99	45.111	ENSLAFG00000010407	URB1	98	45.111	Loxodonta_africana
ENSHBUG00000001904	urb1	100	44.991	ENSMFAG00000034391	URB1	97	45.122	Macaca_fascicularis
ENSHBUG00000001904	urb1	100	44.957	ENSMMUG00000010295	URB1	99	45.087	Macaca_mulatta
ENSHBUG00000001904	urb1	100	44.207	ENSMNEG00000032981	URB1	99	44.338	Macaca_nemestrina
ENSHBUG00000001904	urb1	100	45.166	ENSMLEG00000041435	URB1	99	45.595	Mandrillus_leucophaeus
ENSHBUG00000001904	urb1	99	70.251	ENSMAMG00000011238	urb1	99	70.163	Mastacembelus_armatus
ENSHBUG00000001904	urb1	100	92.365	ENSMZEG00005011862	urb1	100	92.365	Maylandia_zebra
ENSHBUG00000001904	urb1	98	46.343	ENSMGAG00000014512	URB1	99	46.658	Meleagris_gallopavo
ENSHBUG00000001904	urb1	92	53.695	ENSMAUG00000010516	Urb1	99	52.950	Mesocricetus_auratus
ENSHBUG00000001904	urb1	99	44.707	ENSMICG00000016424	URB1	99	44.912	Microcebus_murinus
ENSHBUG00000001904	urb1	99	43.600	ENSMOCG00000012613	Urb1	98	44.081	Microtus_ochrogaster
ENSHBUG00000001904	urb1	99	44.294	ENSMODG00000021076	URB1	99	44.606	Monodelphis_domestica
ENSHBUG00000001904	urb1	98	74.790	ENSMALG00000017411	urb1	99	74.790	Monopterus_albus
ENSHBUG00000001904	urb1	99	44.180	MGP_CAROLIEiJ_G0020948	Urb1	99	44.180	Mus_caroli
ENSHBUG00000001904	urb1	99	44.048	ENSMUSG00000039929	Urb1	99	44.048	Mus_musculus
ENSHBUG00000001904	urb1	99	44.067	MGP_PahariEiJ_G0016653	Urb1	99	44.067	Mus_pahari
ENSHBUG00000001904	urb1	99	43.970	MGP_SPRETEiJ_G0021854	Urb1	99	43.970	Mus_spretus
ENSHBUG00000001904	urb1	99	44.936	ENSMPUG00000001123	URB1	99	45.193	Mustela_putorius_furo
ENSHBUG00000001904	urb1	99	43.659	ENSNGAG00000001905	Urb1	98	43.888	Nannospalax_galili
ENSHBUG00000001904	urb1	83	91.301	ENSNBRG00000001049	urb1	99	91.301	Neolamprologus_brichardi
ENSHBUG00000001904	urb1	98	43.984	ENSNLEG00000026872	URB1	99	43.822	Nomascus_leucogenys
ENSHBUG00000001904	urb1	93	49.904	ENSMEUG00000010828	URB1	95	41.539	Notamacropus_eugenii
ENSHBUG00000001904	urb1	99	42.970	ENSOPRG00000013482	URB1	99	43.293	Ochotona_princeps
ENSHBUG00000001904	urb1	99	44.119	ENSODEG00000002587	URB1	98	44.400	Octodon_degus
ENSHBUG00000001904	urb1	100	96.055	ENSONIG00000005599	urb1	100	96.055	Oreochromis_niloticus
ENSHBUG00000001904	urb1	99	45.166	ENSOCUG00000009381	URB1	99	45.495	Oryctolagus_cuniculus
ENSHBUG00000001904	urb1	99	68.819	ENSORLG00000003429	urb1	99	68.819	Oryzias_latipes
ENSHBUG00000001904	urb1	99	68.463	ENSORLG00020013785	urb1	99	68.463	Oryzias_latipes_hni
ENSHBUG00000001904	urb1	93	74.309	ENSORLG00015019421	urb1	99	74.309	Oryzias_latipes_hsok
ENSHBUG00000001904	urb1	77	69.112	ENSOMEG00000002094	urb1	99	69.112	Oryzias_melastigma
ENSHBUG00000001904	urb1	100	44.919	ENSOGAG00000017140	URB1	99	45.326	Otolemur_garnettii
ENSHBUG00000001904	urb1	96	48.407	ENSOARG00000013679	URB1	99	47.771	Ovis_aries
ENSHBUG00000001904	urb1	99	44.978	ENSPPAG00000003423	URB1	99	45.146	Pan_paniscus
ENSHBUG00000001904	urb1	99	44.357	ENSPPRG00000023131	URB1	99	44.606	Panthera_pardus
ENSHBUG00000001904	urb1	87	45.802	ENSPTIG00000016125	URB1	93	45.802	Panthera_tigris_altaica
ENSHBUG00000001904	urb1	99	44.890	ENSPTRG00000013852	URB1	99	45.057	Pan_troglodytes
ENSHBUG00000001904	urb1	100	45.122	ENSPANG00000021964	URB1	99	45.253	Papio_anubis
ENSHBUG00000001904	urb1	99	54.106	ENSPKIG00000003683	urb1	98	54.703	Paramormyrops_kingsleyae
ENSHBUG00000001904	urb1	99	44.870	ENSPEMG00000021205	Urb1	98	44.870	Peromyscus_maniculatus_bairdii
ENSHBUG00000001904	urb1	80	32.350	ENSPMAG00000009733	URB1	99	32.761	Petromyzon_marinus
ENSHBUG00000001904	urb1	99	43.897	ENSPCIG00000016350	URB1	99	44.275	Phascolarctos_cinereus
ENSHBUG00000001904	urb1	97	70.032	ENSPLAG00000004371	urb1	100	70.032	Poecilia_latipinna
ENSHBUG00000001904	urb1	100	70.562	ENSPMEG00000006634	urb1	100	70.562	Poecilia_mexicana
ENSHBUG00000001904	urb1	100	70.146	ENSPREG00000013453	urb1	100	70.146	Poecilia_reticulata
ENSHBUG00000001904	urb1	99	44.640	ENSPPYG00000011359	URB1	99	44.832	Pongo_abelii
ENSHBUG00000001904	urb1	99	39.701	ENSPCAG00000007430	URB1	99	39.745	Procavia_capensis
ENSHBUG00000001904	urb1	99	44.725	ENSPCOG00000022695	URB1	99	45.202	Propithecus_coquereli
ENSHBUG00000001904	urb1	99	43.840	ENSPVAG00000000889	URB1	98	44.085	Pteropus_vampyrus
ENSHBUG00000001904	urb1	100	92.702	ENSPNYG00000010589	urb1	100	92.702	Pundamilia_nyererei
ENSHBUG00000001904	urb1	99	50.066	ENSPNAG00000019324	urb1	99	50.579	Pygocentrus_nattereri
ENSHBUG00000001904	urb1	99	43.761	ENSRNOG00000002080	Urb1	99	43.761	Rattus_norvegicus
ENSHBUG00000001904	urb1	100	45.000	ENSRBIG00000033122	URB1	99	45.000	Rhinopithecus_bieti
ENSHBUG00000001904	urb1	100	44.976	ENSRROG00000040237	URB1	99	44.976	Rhinopithecus_roxellana
ENSHBUG00000001904	urb1	99	44.822	ENSSBOG00000027672	URB1	99	44.974	Saimiri_boliviensis_boliviensis
ENSHBUG00000001904	urb1	99	44.744	ENSSHAG00000005140	URB1	99	45.015	Sarcophilus_harrisii
ENSHBUG00000001904	urb1	93	56.567	ENSSFOG00015000339	urb1	99	56.946	Scleropages_formosus
ENSHBUG00000001904	urb1	100	75.077	ENSSMAG00000003782	urb1	100	75.342	Scophthalmus_maximus
ENSHBUG00000001904	urb1	100	78.619	ENSSDUG00000012313	urb1	99	78.619	Seriola_dumerili
ENSHBUG00000001904	urb1	100	78.309	ENSSLDG00000023179	urb1	99	78.309	Seriola_lalandi_dorsalis
ENSHBUG00000001904	urb1	99	46.027	ENSSPUG00000012447	URB1	99	46.265	Sphenodon_punctatus
ENSHBUG00000001904	urb1	99	77.557	ENSSPAG00000006325	urb1	99	77.690	Stegastes_partitus
ENSHBUG00000001904	urb1	99	43.816	ENSSSCG00000032024	URB1	98	44.182	Sus_scrofa
ENSHBUG00000001904	urb1	74	48.333	ENSTGUG00000013442	URB1	100	48.243	Taeniopygia_guttata
ENSHBUG00000001904	urb1	100	68.938	ENSTRUG00000009372	urb1	100	68.761	Takifugu_rubripes
ENSHBUG00000001904	urb1	99	67.306	ENSTNIG00000016277	urb1	99	67.113	Tetraodon_nigroviridis
ENSHBUG00000001904	urb1	77	49.425	ENSTBEG00000010044	URB1	79	49.425	Tupaia_belangeri
ENSHBUG00000001904	urb1	90	50.363	ENSTTRG00000007712	URB1	91	50.363	Tursiops_truncatus
ENSHBUG00000001904	urb1	99	44.129	ENSUAMG00000012231	URB1	99	44.449	Ursus_americanus
ENSHBUG00000001904	urb1	87	46.378	ENSUMAG00000017419	URB1	95	45.764	Ursus_maritimus
ENSHBUG00000001904	urb1	67	60.800	ENSVPAG00000001164	URB1	67	60.800	Vicugna_pacos
ENSHBUG00000001904	urb1	99	44.343	ENSVVUG00000000551	URB1	99	44.577	Vulpes_vulpes
ENSHBUG00000001904	urb1	99	44.959	ENSXETG00000009895	urb1	98	44.959	Xenopus_tropicalis
ENSHBUG00000001904	urb1	100	65.590	ENSXCOG00000005500	urb1	98	68.418	Xiphophorus_couchianus
ENSHBUG00000001904	urb1	100	66.033	ENSXMAG00000007253	urb1	98	68.626	Xiphophorus_maculatus