EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000001964 (Gene tree)
Gene ID: 102309774
Gene Symbol: -
Alias: -
Full Name: protein SON-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 24349 bases
Position: chrJH425575.1:332335-356683
Accession: 102309774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000762	dsrm	PF00035.26	5e-12	1	1
ENSHBUP00000021968	dsrm	PF00035.26	5.2e-12	1	1
ENSHBUP00000000762	DND1_DSRM	PF14709.7	5.2e-12	1	1
ENSHBUP00000021968	DND1_DSRM	PF14709.7	5.2e-12	1	1
ENSHBUP00000021968	G-patch	PF01585.23	4.1e-12	1	1
ENSHBUP00000000762	G-patch	PF01585.23	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014926	-	3777	XM_005938706	ENSHBUP00000000762	922 (aa)	XP_005938768	UPI0003BDC819
ENSHBUT00000014907	-	3876	XM_005938707	ENSHBUP00000021968	897 (aa)	XP_005938769	UPI0003BD5DE3

Gene Model

Click here to download ENSHBUG00000001964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000001964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000001964	-	99	73.014	ENSAPOG00000000559	-	92	74.432	Acanthochromis_polyacanthus
ENSHBUG00000001964	-	99	72.935	ENSAOCG00000004262	-	92	73.672	Amphiprion_ocellaris
ENSHBUG00000001964	-	99	72.935	ENSAPEG00000009136	-	92	73.672	Amphiprion_percula
ENSHBUG00000001964	-	61	86.751	ENSATEG00000012732	-	81	87.132	Anabas_testudineus
ENSHBUG00000001964	-	100	99.666	ENSACLG00000007065	-	97	99.451	Astatotilapia_calliptera
ENSHBUG00000001964	-	61	67.430	ENSELUG00000003878	-	68	68.214	Esox_lucius
ENSHBUG00000001964	-	96	66.367	ENSFHEG00000019700	-	93	66.404	Fundulus_heteroclitus
ENSHBUG00000001964	-	54	48.984	ENSGALG00000052354	-	72	52.925	Gallus_gallus
ENSHBUG00000001964	-	96	65.692	ENSGAFG00000016463	-	92	64.382	Gambusia_affinis
ENSHBUG00000001964	-	96	68.707	ENSKMAG00000012003	-	92	68.516	Kryptolebias_marmoratus
ENSHBUG00000001964	-	61	85.428	ENSLBEG00000008600	-	92	68.729	Labrus_bergylta
ENSHBUG00000001964	-	98	65.199	ENSMAMG00000003082	-	100	64.347	Mastacembelus_armatus
ENSHBUG00000001964	-	100	99.777	ENSMZEG00005018999	-	97	99.561	Maylandia_zebra
ENSHBUG00000001964	-	54	46.856	ENSMGAG00000014526	-	95	46.289	Meleagris_gallopavo
ENSHBUG00000001964	-	70	72.960	ENSONIG00000003775	-	97	74.560	Oreochromis_niloticus
ENSHBUG00000001964	-	96	60.850	ENSORLG00000027334	-	74	73.504	Oryzias_latipes
ENSHBUG00000001964	-	52	59.619	ENSPMGG00000015598	-	69	71.893	Periophthalmus_magnuspinnatus
ENSHBUG00000001964	-	96	65.881	ENSPLAG00000008338	-	92	65.135	Poecilia_latipinna
ENSHBUG00000001964	-	96	66.330	ENSPMEG00000017611	-	92	65.583	Poecilia_mexicana
ENSHBUG00000001964	-	96	65.692	ENSPREG00000017979	-	92	65.095	Poecilia_reticulata
ENSHBUG00000001964	-	96	70.000	ENSSMAG00000000065	-	99	71.854	Scophthalmus_maximus
ENSHBUG00000001964	-	100	68.757	ENSSDUG00000018550	-	100	70.238	Seriola_dumerili
ENSHBUG00000001964	-	100	73.667	ENSSPAG00000014575	-	97	74.211	Stegastes_partitus
ENSHBUG00000001964	-	61	81.685	ENSTRUG00000019967	-	57	81.536	Takifugu_rubripes
ENSHBUG00000001964	-	52	47.992	ENSXETG00000014115	son	99	47.842	Xenopus_tropicalis
ENSHBUG00000001964	-	96	66.817	ENSXMAG00000025239	-	92	65.428	Xiphophorus_maculatus