EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002111 (Gene tree)
Gene ID: 102301086
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 14874 bases
Position: chrJH425336.1:3120021-3134894
Accession: 102301086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000915	RNA_pol_L_2	PF13656.6	3.4e-29	1	1
ENSHBUP00000022056	RNA_pol_L_2	PF13656.6	5.6e-29	1	1
ENSHBUP00000000923	RNA_pol_L_2	PF13656.6	5.9e-29	1	1
ENSHBUP00000000915	RNA_pol_L	PF01193.24	1.1e-11	1	1
ENSHBUP00000022056	RNA_pol_L	PF01193.24	1.9e-11	1	1
ENSHBUP00000000923	RNA_pol_L	PF01193.24	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014642	-	2203	XM_005916566	ENSHBUP00000022056	146 (aa)	XP_005916628	UPI0003BCDBB0
ENSHBUT00000014651	-	2274	XM_005916565	ENSHBUP00000000923	149 (aa)	XP_005916627	UPI0003BC954C
ENSHBUT00000014661	-	2132	XM_014331892	ENSHBUP00000000915	114 (aa)	XP_014187378	UPI00022B3B65

Gene Model

Click here to download ENSHBUG00000002111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002111	polr1d	94	35.185	ENSHBUG00000008467	polr2j	86	35.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002111	polr1d	94	71.028	ENSG00000186184	POLR1D	92	71.028	Homo_sapiens
ENSHBUG00000002111	polr1d	89	89.216	ENSAPOG00000021882	polr1d	96	89.216	Acanthochromis_polyacanthus
ENSHBUG00000002111	polr1d	94	71.963	ENSAMEG00000019095	POLR1D	86	71.963	Ailuropoda_melanoleuca
ENSHBUG00000002111	polr1d	100	92.174	ENSACIG00000013328	polr1d	100	92.174	Amphilophus_citrinellus
ENSHBUG00000002111	polr1d	100	86.842	ENSAOCG00000018500	polr1d	100	86.842	Amphiprion_ocellaris
ENSHBUG00000002111	polr1d	100	87.719	ENSAPEG00000009489	polr1d	100	87.719	Amphiprion_percula
ENSHBUG00000002111	polr1d	100	92.105	ENSATEG00000019322	polr1d	100	92.105	Anabas_testudineus
ENSHBUG00000002111	polr1d	97	67.568	ENSACAG00000015753	POLR1D	96	67.568	Anolis_carolinensis
ENSHBUG00000002111	polr1d	94	71.028	ENSANAG00000024486	POLR1D	80	71.028	Aotus_nancymaae
ENSHBUG00000002111	polr1d	100	100.000	ENSACLG00000023805	polr1d	100	100.000	Astatotilapia_calliptera
ENSHBUG00000002111	polr1d	99	76.991	ENSAMXG00000036118	polr1d	98	76.991	Astyanax_mexicanus
ENSHBUG00000002111	polr1d	94	70.093	ENSBTAG00000008642	POLR1D	80	70.093	Bos_taurus
ENSHBUG00000002111	polr1d	94	70.093	ENSBTAG00000033252	-	80	70.093	Bos_taurus
ENSHBUG00000002111	polr1d	70	37.500	WBGene00010230	rpac-19	55	38.554	Caenorhabditis_elegans
ENSHBUG00000002111	polr1d	94	71.963	ENSCJAG00000044669	POLR1D	80	71.963	Callithrix_jacchus
ENSHBUG00000002111	polr1d	94	71.963	ENSCAFG00000006755	POLR1D	80	71.963	Canis_familiaris
ENSHBUG00000002111	polr1d	94	71.028	ENSCHIG00000021910	POLR1D	80	71.028	Capra_hircus
ENSHBUG00000002111	polr1d	93	62.037	ENSTSYG00000034852	-	89	62.037	Carlito_syrichta
ENSHBUG00000002111	polr1d	93	72.642	ENSTSYG00000026817	-	80	72.642	Carlito_syrichta
ENSHBUG00000002111	polr1d	57	60.000	ENSCAPG00000006058	-	66	60.000	Cavia_aperea
ENSHBUG00000002111	polr1d	58	59.091	ENSCPOG00000030450	-	67	59.091	Cavia_porcellus
ENSHBUG00000002111	polr1d	94	71.963	ENSCCAG00000021349	-	80	71.963	Cebus_capucinus
ENSHBUG00000002111	polr1d	94	54.206	ENSCCAG00000020191	-	78	54.206	Cebus_capucinus
ENSHBUG00000002111	polr1d	93	61.321	ENSCATG00000022900	-	79	61.321	Cercocebus_atys
ENSHBUG00000002111	polr1d	94	71.028	ENSCATG00000030710	-	80	71.028	Cercocebus_atys
ENSHBUG00000002111	polr1d	94	71.028	ENSCLAG00000017623	POLR1D	86	71.028	Chinchilla_lanigera
ENSHBUG00000002111	polr1d	89	80.198	ENSCPBG00000004719	POLR1D	100	80.198	Chrysemys_picta_bellii
ENSHBUG00000002111	polr1d	94	71.028	ENSCANG00000028632	-	80	71.028	Colobus_angolensis_palliatus
ENSHBUG00000002111	polr1d	93	70.755	ENSCANG00000037694	-	80	70.755	Colobus_angolensis_palliatus
ENSHBUG00000002111	polr1d	94	70.093	ENSCGRG00001021251	Polr1d	80	70.093	Cricetulus_griseus_chok1gshd
ENSHBUG00000002111	polr1d	94	70.093	ENSCGRG00000011639	Polr1d	80	70.093	Cricetulus_griseus_crigri
ENSHBUG00000002111	polr1d	93	88.679	ENSCSEG00000018268	polr1d	100	85.470	Cynoglossus_semilaevis
ENSHBUG00000002111	polr1d	100	85.965	ENSCVAG00000018527	polr1d	100	85.965	Cyprinodon_variegatus
ENSHBUG00000002111	polr1d	96	77.273	ENSDARG00000037570	polr1d	97	77.273	Danio_rerio
ENSHBUG00000002111	polr1d	94	70.093	ENSDNOG00000043676	-	80	70.093	Dasypus_novemcinctus
ENSHBUG00000002111	polr1d	94	69.159	ENSDNOG00000046247	-	80	69.159	Dasypus_novemcinctus
ENSHBUG00000002111	polr1d	94	70.093	ENSDORG00000029155	Polr1d	80	70.093	Dipodomys_ordii
ENSHBUG00000002111	polr1d	85	44.330	FBgn0086447	l(2)37Cg	91	44.330	Drosophila_melanogaster
ENSHBUG00000002111	polr1d	94	71.028	ENSETEG00000012797	POLR1D	86	71.028	Echinops_telfairi
ENSHBUG00000002111	polr1d	76	68.966	ENSEBUG00000011748	polr1d	61	68.966	Eptatretus_burgeri
ENSHBUG00000002111	polr1d	94	71.963	ENSEASG00005022487	POLR1D	83	71.963	Equus_asinus_asinus
ENSHBUG00000002111	polr1d	93	72.642	ENSEEUG00000013144	POLR1D	85	72.642	Erinaceus_europaeus
ENSHBUG00000002111	polr1d	97	80.357	ENSELUG00000005105	rpac2	100	78.448	Esox_lucius
ENSHBUG00000002111	polr1d	94	71.963	ENSFCAG00000030162	POLR1D	80	71.963	Felis_catus
ENSHBUG00000002111	polr1d	88	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSHBUG00000002111	polr1d	94	70.093	ENSFDAG00000004463	POLR1D	80	70.093	Fukomys_damarensis
ENSHBUG00000002111	polr1d	100	88.596	ENSFHEG00000015410	polr1d	99	88.596	Fundulus_heteroclitus
ENSHBUG00000002111	polr1d	61	62.319	ENSGALG00000007470	POLR1D	68	62.319	Gallus_gallus
ENSHBUG00000002111	polr1d	100	88.596	ENSGAFG00000001693	polr1d	100	88.596	Gambusia_affinis
ENSHBUG00000002111	polr1d	96	92.661	ENSGACG00000018585	polr1d	92	92.661	Gasterosteus_aculeatus
ENSHBUG00000002111	polr1d	100	77.193	ENSGAGG00000008503	POLR1D	100	77.193	Gopherus_agassizii
ENSHBUG00000002111	polr1d	94	71.028	ENSGGOG00000004235	POLR1D	80	71.028	Gorilla_gorilla
ENSHBUG00000002111	polr1d	94	69.159	ENSHGLG00000003202	POLR1D	80	69.159	Heterocephalus_glaber_female
ENSHBUG00000002111	polr1d	94	69.159	ENSHGLG00100009393	POLR1D	80	69.159	Heterocephalus_glaber_male
ENSHBUG00000002111	polr1d	100	83.333	ENSHCOG00000003258	polr1d	100	83.333	Hippocampus_comes
ENSHBUG00000002111	polr1d	100	79.130	ENSIPUG00000014810	polr1d	100	79.130	Ictalurus_punctatus
ENSHBUG00000002111	polr1d	94	71.028	ENSSTOG00000013877	POLR1D	80	71.028	Ictidomys_tridecemlineatus
ENSHBUG00000002111	polr1d	94	70.093	ENSJJAG00000022671	-	89	70.093	Jaculus_jaculus
ENSHBUG00000002111	polr1d	94	54.206	ENSJJAG00000021667	-	63	54.206	Jaculus_jaculus
ENSHBUG00000002111	polr1d	100	86.842	ENSKMAG00000015256	polr1d	100	86.842	Kryptolebias_marmoratus
ENSHBUG00000002111	polr1d	100	91.228	ENSLBEG00000015919	polr1d	100	91.228	Labrus_bergylta
ENSHBUG00000002111	polr1d	96	68.807	ENSLACG00000006810	POLR1D	90	68.807	Latimeria_chalumnae
ENSHBUG00000002111	polr1d	62	81.690	ENSLOCG00000014976	polr1d	96	81.690	Lepisosteus_oculatus
ENSHBUG00000002111	polr1d	95	70.370	ENSLAFG00000032290	POLR1D	81	70.370	Loxodonta_africana
ENSHBUG00000002111	polr1d	94	71.028	ENSMFAG00000045264	POLR1D	83	71.028	Macaca_fascicularis
ENSHBUG00000002111	polr1d	71	66.667	ENSMMUG00000041570	-	73	66.667	Macaca_mulatta
ENSHBUG00000002111	polr1d	94	71.028	ENSMMUG00000020386	POLR1D	92	71.028	Macaca_mulatta
ENSHBUG00000002111	polr1d	94	71.028	ENSMNEG00000008630	-	80	71.028	Macaca_nemestrina
ENSHBUG00000002111	polr1d	93	56.604	ENSMNEG00000038120	-	78	56.604	Macaca_nemestrina
ENSHBUG00000002111	polr1d	94	71.028	ENSMLEG00000041048	-	80	71.028	Mandrillus_leucophaeus
ENSHBUG00000002111	polr1d	93	62.264	ENSMLEG00000032251	-	79	62.264	Mandrillus_leucophaeus
ENSHBUG00000002111	polr1d	89	91.176	ENSMAMG00000014834	polr1d	93	93.939	Mastacembelus_armatus
ENSHBUG00000002111	polr1d	89	97.059	ENSMZEG00005006638	polr1d	88	100.000	Maylandia_zebra
ENSHBUG00000002111	polr1d	81	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSHBUG00000002111	polr1d	94	70.093	ENSMAUG00000001946	Polr1d	80	70.093	Mesocricetus_auratus
ENSHBUG00000002111	polr1d	94	70.093	ENSMICG00000016883	-	80	70.093	Microcebus_murinus
ENSHBUG00000002111	polr1d	98	54.464	ENSMICG00000007349	-	84	54.464	Microcebus_murinus
ENSHBUG00000002111	polr1d	94	69.159	ENSMOCG00000021288	Polr1d	80	69.159	Microtus_ochrogaster
ENSHBUG00000002111	polr1d	100	92.105	ENSMMOG00000009605	polr1d	100	92.105	Mola_mola
ENSHBUG00000002111	polr1d	100	73.684	ENSMODG00000023881	POLR1D	100	73.684	Monodelphis_domestica
ENSHBUG00000002111	polr1d	100	88.596	ENSMALG00000010652	polr1d	100	88.596	Monopterus_albus
ENSHBUG00000002111	polr1d	91	70.192	MGP_CAROLIEiJ_G0028034	Polr1d	78	70.192	Mus_caroli
ENSHBUG00000002111	polr1d	98	66.071	ENSMUSG00000029642	Polr1d	84	66.071	Mus_musculus
ENSHBUG00000002111	polr1d	94	68.224	MGP_PahariEiJ_G0024600	Polr1d	80	68.224	Mus_pahari
ENSHBUG00000002111	polr1d	98	66.964	MGP_SPRETEiJ_G0029032	Polr1d	84	66.964	Mus_spretus
ENSHBUG00000002111	polr1d	94	71.028	ENSMLUG00000027169	-	80	71.028	Myotis_lucifugus
ENSHBUG00000002111	polr1d	94	66.355	ENSMLUG00000004118	-	80	66.355	Myotis_lucifugus
ENSHBUG00000002111	polr1d	95	70.370	ENSNGAG00000006014	Polr1d	93	70.370	Nannospalax_galili
ENSHBUG00000002111	polr1d	100	100.000	ENSNBRG00000020327	polr1d	100	100.000	Neolamprologus_brichardi
ENSHBUG00000002111	polr1d	94	71.028	ENSNLEG00000000358	POLR1D	80	71.028	Nomascus_leucogenys
ENSHBUG00000002111	polr1d	93	60.377	ENSODEG00000014801	-	77	60.377	Octodon_degus
ENSHBUG00000002111	polr1d	93	71.698	ENSODEG00000005294	-	80	71.698	Octodon_degus
ENSHBUG00000002111	polr1d	93	80.189	ENSOANG00000008708	-	98	80.189	Ornithorhynchus_anatinus
ENSHBUG00000002111	polr1d	94	71.028	ENSOCUG00000015706	POLR1D	66	71.028	Oryctolagus_cuniculus
ENSHBUG00000002111	polr1d	100	82.456	ENSORLG00000010257	polr1d	100	82.456	Oryzias_latipes
ENSHBUG00000002111	polr1d	100	82.456	ENSORLG00020000533	polr1d	77	82.456	Oryzias_latipes_hni
ENSHBUG00000002111	polr1d	100	83.333	ENSORLG00015013267	polr1d	75	83.333	Oryzias_latipes_hsok
ENSHBUG00000002111	polr1d	100	82.456	ENSOMEG00000014912	polr1d	76	82.456	Oryzias_melastigma
ENSHBUG00000002111	polr1d	98	69.643	ENSOGAG00000014601	POLR1D	84	69.643	Otolemur_garnettii
ENSHBUG00000002111	polr1d	94	71.028	ENSOARG00000017005	POLR1D	82	71.028	Ovis_aries
ENSHBUG00000002111	polr1d	94	71.028	ENSPPAG00000028138	POLR1D	80	71.028	Pan_paniscus
ENSHBUG00000002111	polr1d	94	71.963	ENSPPRG00000003381	POLR1D	80	71.963	Panthera_pardus
ENSHBUG00000002111	polr1d	94	71.963	ENSPTIG00000018137	POLR1D	80	71.963	Panthera_tigris_altaica
ENSHBUG00000002111	polr1d	94	71.028	ENSPTRG00000005734	POLR1D	80	71.028	Pan_troglodytes
ENSHBUG00000002111	polr1d	93	61.321	ENSPANG00000035051	-	79	61.321	Papio_anubis
ENSHBUG00000002111	polr1d	94	71.028	ENSPANG00000020259	-	80	71.028	Papio_anubis
ENSHBUG00000002111	polr1d	85	80.412	ENSPKIG00000021891	polr1d	98	60.976	Paramormyrops_kingsleyae
ENSHBUG00000002111	polr1d	100	72.807	ENSPSIG00000011822	POLR1D	88	72.807	Pelodiscus_sinensis
ENSHBUG00000002111	polr1d	100	72.807	ENSPMGG00000012998	POLR1D	84	72.807	Periophthalmus_magnuspinnatus
ENSHBUG00000002111	polr1d	100	81.579	ENSPMGG00000010359	polr1d	99	81.579	Periophthalmus_magnuspinnatus
ENSHBUG00000002111	polr1d	94	70.093	ENSPEMG00000006336	-	82	70.093	Peromyscus_maniculatus_bairdii
ENSHBUG00000002111	polr1d	92	60.000	ENSPMAG00000004228	polr1d	88	60.000	Petromyzon_marinus
ENSHBUG00000002111	polr1d	100	72.807	ENSPCIG00000001673	POLR1D	100	72.807	Phascolarctos_cinereus
ENSHBUG00000002111	polr1d	100	89.474	ENSPFOG00000023343	polr1d	100	89.474	Poecilia_formosa
ENSHBUG00000002111	polr1d	100	89.474	ENSPLAG00000009675	polr1d	100	89.474	Poecilia_latipinna
ENSHBUG00000002111	polr1d	100	89.474	ENSPMEG00000004628	polr1d	100	89.474	Poecilia_mexicana
ENSHBUG00000002111	polr1d	100	89.474	ENSPREG00000022032	polr1d	100	89.474	Poecilia_reticulata
ENSHBUG00000002111	polr1d	94	69.159	ENSPCOG00000028175	POLR1D	80	69.159	Propithecus_coquereli
ENSHBUG00000002111	polr1d	100	100.000	ENSPNYG00000000107	polr1d	100	100.000	Pundamilia_nyererei
ENSHBUG00000002111	polr1d	96	76.147	ENSPNAG00000001512	polr1d	100	73.109	Pygocentrus_nattereri
ENSHBUG00000002111	polr1d	93	68.868	ENSRBIG00000000336	-	80	68.868	Rhinopithecus_bieti
ENSHBUG00000002111	polr1d	94	71.028	ENSRBIG00000036378	-	80	71.028	Rhinopithecus_bieti
ENSHBUG00000002111	polr1d	94	71.028	ENSRROG00000042232	-	80	71.028	Rhinopithecus_roxellana
ENSHBUG00000002111	polr1d	93	69.811	ENSRROG00000026751	-	80	69.811	Rhinopithecus_roxellana
ENSHBUG00000002111	polr1d	79	50.000	YNL113W	RPC19	70	46.465	Saccharomyces_cerevisiae
ENSHBUG00000002111	polr1d	87	70.707	ENSSBOG00000030146	-	73	70.707	Saimiri_boliviensis_boliviensis
ENSHBUG00000002111	polr1d	94	71.028	ENSSBOG00000028482	-	80	71.028	Saimiri_boliviensis_boliviensis
ENSHBUG00000002111	polr1d	97	71.171	ENSSHAG00000001190	POLR1D	86	71.171	Sarcophilus_harrisii
ENSHBUG00000002111	polr1d	96	78.182	ENSSFOG00015011375	polr1d	96	78.182	Scleropages_formosus
ENSHBUG00000002111	polr1d	100	93.860	ENSSMAG00000011861	polr1d	100	93.860	Scophthalmus_maximus
ENSHBUG00000002111	polr1d	100	92.982	ENSSDUG00000011930	polr1d	100	92.982	Seriola_dumerili
ENSHBUG00000002111	polr1d	99	82.456	ENSSLDG00000023871	polr1d	97	82.456	Seriola_lalandi_dorsalis
ENSHBUG00000002111	polr1d	94	71.963	ENSSARG00000007840	POLR1D	80	71.963	Sorex_araneus
ENSHBUG00000002111	polr1d	92	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSHBUG00000002111	polr1d	100	92.982	ENSSPAG00000011764	polr1d	100	92.982	Stegastes_partitus
ENSHBUG00000002111	polr1d	94	70.093	ENSSSCG00000009310	POLR1D	80	70.093	Sus_scrofa
ENSHBUG00000002111	polr1d	84	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSHBUG00000002111	polr1d	100	80.702	ENSTRUG00000019741	polr1d	100	80.702	Takifugu_rubripes
ENSHBUG00000002111	polr1d	98	68.750	ENSTBEG00000007006	POLR1D	90	68.750	Tupaia_belangeri
ENSHBUG00000002111	polr1d	94	71.963	ENSUAMG00000011413	POLR1D	80	71.963	Ursus_americanus
ENSHBUG00000002111	polr1d	94	71.963	ENSUMAG00000016968	POLR1D	84	71.963	Ursus_maritimus
ENSHBUG00000002111	polr1d	94	71.963	ENSVVUG00000009216	POLR1D	80	71.963	Vulpes_vulpes
ENSHBUG00000002111	polr1d	89	88.119	ENSXCOG00000011731	polr1d	95	76.190	Xiphophorus_couchianus
ENSHBUG00000002111	polr1d	89	89.109	ENSXMAG00000017538	polr1d	97	74.016	Xiphophorus_maculatus