EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000002114 (Gene tree)
Gene ID: 102301017
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6507 bases
Position: chrJH425938.1:261286-267792
Accession: 102301017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022063	RTC	PF01137.21	3.8e-87	1	1
ENSHBUP00000022063	RTC_insert	PF05189.13	9.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014637	-	1900	XM_005948422	ENSHBUP00000022063	366 (aa)	XP_005948484	UPI0003BD5AFA

Gene Model

Click here to download ENSHBUG00000002114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002114	rtca	99	70.219	ENSG00000137996	RTCA	100	70.219	Homo_sapiens
ENSHBUG00000002114	rtca	100	92.077	ENSAPOG00000001345	rtca	100	92.077	Acanthochromis_polyacanthus
ENSHBUG00000002114	rtca	73	72.119	ENSAMEG00000008855	RTCA	100	72.119	Ailuropoda_melanoleuca
ENSHBUG00000002114	rtca	99	95.330	ENSACIG00000019643	rtca	100	95.330	Amphilophus_citrinellus
ENSHBUG00000002114	rtca	100	92.896	ENSAOCG00000014979	rtca	100	92.896	Amphiprion_ocellaris
ENSHBUG00000002114	rtca	100	92.623	ENSAPEG00000006945	rtca	100	92.623	Amphiprion_percula
ENSHBUG00000002114	rtca	95	91.691	ENSATEG00000006315	rtca	96	91.691	Anabas_testudineus
ENSHBUG00000002114	rtca	95	66.856	ENSAPLG00000015430	RTCA	100	66.856	Anas_platyrhynchos
ENSHBUG00000002114	rtca	98	70.637	ENSANAG00000025446	RTCA	99	70.637	Aotus_nancymaae
ENSHBUG00000002114	rtca	100	99.727	ENSACLG00000020770	rtca	100	99.727	Astatotilapia_calliptera
ENSHBUG00000002114	rtca	99	81.044	ENSAMXG00000043271	rtca	100	81.044	Astyanax_mexicanus
ENSHBUG00000002114	rtca	99	70.765	ENSBTAG00000006321	RTCA	100	70.765	Bos_taurus
ENSHBUG00000002114	rtca	99	69.945	ENSCJAG00000003398	RTCA	100	69.945	Callithrix_jacchus
ENSHBUG00000002114	rtca	99	69.945	ENSCAFG00000020010	RTCA	68	69.945	Canis_familiaris
ENSHBUG00000002114	rtca	99	69.945	ENSCAFG00020011528	RTCA	57	69.945	Canis_lupus_dingo
ENSHBUG00000002114	rtca	99	70.492	ENSCHIG00000018937	RTCA	100	70.492	Capra_hircus
ENSHBUG00000002114	rtca	99	69.755	ENSTSYG00000011305	RTCA	100	69.755	Carlito_syrichta
ENSHBUG00000002114	rtca	99	69.399	ENSCCAG00000021844	RTCA	100	69.399	Cebus_capucinus
ENSHBUG00000002114	rtca	99	67.810	ENSCATG00000019364	RTCA	100	70.227	Cercocebus_atys
ENSHBUG00000002114	rtca	86	71.519	ENSCLAG00000006125	RTCA	100	71.519	Chinchilla_lanigera
ENSHBUG00000002114	rtca	99	69.945	ENSCSAG00000001509	RTCA	100	69.945	Chlorocebus_sabaeus
ENSHBUG00000002114	rtca	98	69.529	ENSCHOG00000005211	RTCA	99	69.529	Choloepus_hoffmanni
ENSHBUG00000002114	rtca	99	66.849	ENSCPBG00000026658	RTCA	100	66.849	Chrysemys_picta_bellii
ENSHBUG00000002114	rtca	99	54.670	ENSCING00000007875	-	99	54.670	Ciona_intestinalis
ENSHBUG00000002114	rtca	99	53.846	ENSCSAVG00000007269	-	99	53.846	Ciona_savignyi
ENSHBUG00000002114	rtca	99	69.672	ENSCANG00000040106	RTCA	100	69.672	Colobus_angolensis_palliatus
ENSHBUG00000002114	rtca	73	70.632	ENSCGRG00001013163	Rtca	85	70.632	Cricetulus_griseus_chok1gshd
ENSHBUG00000002114	rtca	98	84.358	ENSCSEG00000000530	rtca	96	84.358	Cynoglossus_semilaevis
ENSHBUG00000002114	rtca	99	72.404	ENSCVAG00000021809	rtca	100	72.404	Cyprinodon_variegatus
ENSHBUG00000002114	rtca	99	79.670	ENSDARG00000002215	rtca	100	79.670	Danio_rerio
ENSHBUG00000002114	rtca	99	70.492	ENSDNOG00000000456	RTCA	100	70.492	Dasypus_novemcinctus
ENSHBUG00000002114	rtca	99	69.945	ENSDORG00000005448	Rtca	100	69.945	Dipodomys_ordii
ENSHBUG00000002114	rtca	99	40.496	FBgn0025630	Rtca	99	40.496	Drosophila_melanogaster
ENSHBUG00000002114	rtca	93	52.616	ENSEBUG00000008556	rtca	95	52.616	Eptatretus_burgeri
ENSHBUG00000002114	rtca	99	70.219	ENSEASG00005015926	RTCA	100	70.219	Equus_asinus_asinus
ENSHBUG00000002114	rtca	99	70.219	ENSECAG00000019831	RTCA	100	70.219	Equus_caballus
ENSHBUG00000002114	rtca	91	63.584	ENSEEUG00000001165	RTCA	100	63.584	Erinaceus_europaeus
ENSHBUG00000002114	rtca	98	78.273	ENSELUG00000003741	rtca	99	78.273	Esox_lucius
ENSHBUG00000002114	rtca	99	70.300	ENSFCAG00000024460	RTCA	100	70.300	Felis_catus
ENSHBUG00000002114	rtca	92	67.456	ENSFALG00000002443	RTCA	91	67.456	Ficedula_albicollis
ENSHBUG00000002114	rtca	98	55.249	ENSFDAG00000016084	-	100	55.249	Fukomys_damarensis
ENSHBUG00000002114	rtca	99	69.126	ENSFDAG00000012070	-	100	69.126	Fukomys_damarensis
ENSHBUG00000002114	rtca	55	87.624	ENSFHEG00000002868	rtca	92	83.256	Fundulus_heteroclitus
ENSHBUG00000002114	rtca	99	78.571	ENSGMOG00000013264	rtca	100	78.571	Gadus_morhua
ENSHBUG00000002114	rtca	99	67.397	ENSGALG00000005277	RTCA	100	67.397	Gallus_gallus
ENSHBUG00000002114	rtca	100	90.164	ENSGAFG00000011853	rtca	100	90.164	Gambusia_affinis
ENSHBUG00000002114	rtca	99	86.813	ENSGACG00000013497	rtca	100	86.813	Gasterosteus_aculeatus
ENSHBUG00000002114	rtca	80	66.212	ENSGAGG00000023306	RTCA	100	66.212	Gopherus_agassizii
ENSHBUG00000002114	rtca	99	69.672	ENSGGOG00000009546	-	100	69.672	Gorilla_gorilla
ENSHBUG00000002114	rtca	99	69.126	ENSGGOG00000044018	-	100	69.126	Gorilla_gorilla
ENSHBUG00000002114	rtca	99	69.399	ENSHGLG00000002617	RTCA	100	69.399	Heterocephalus_glaber_female
ENSHBUG00000002114	rtca	99	69.399	ENSHGLG00100006056	RTCA	100	69.399	Heterocephalus_glaber_male
ENSHBUG00000002114	rtca	99	78.082	ENSHCOG00000020628	rtca	90	78.082	Hippocampus_comes
ENSHBUG00000002114	rtca	99	79.670	ENSIPUG00000024803	rtca	100	79.670	Ictalurus_punctatus
ENSHBUG00000002114	rtca	99	62.022	ENSSTOG00000033099	-	100	62.022	Ictidomys_tridecemlineatus
ENSHBUG00000002114	rtca	99	65.301	ENSSTOG00000013528	-	100	65.301	Ictidomys_tridecemlineatus
ENSHBUG00000002114	rtca	99	50.959	ENSJJAG00000016178	Rtca	100	50.959	Jaculus_jaculus
ENSHBUG00000002114	rtca	100	89.891	ENSKMAG00000006651	rtca	100	89.891	Kryptolebias_marmoratus
ENSHBUG00000002114	rtca	87	86.834	ENSLBEG00000002448	-	99	86.834	Labrus_bergylta
ENSHBUG00000002114	rtca	98	87.778	ENSLBEG00000028971	rtca	99	87.778	Labrus_bergylta
ENSHBUG00000002114	rtca	99	67.397	ENSLACG00000013666	RTCA	100	67.397	Latimeria_chalumnae
ENSHBUG00000002114	rtca	99	74.795	ENSLOCG00000000093	rtca	99	74.795	Lepisosteus_oculatus
ENSHBUG00000002114	rtca	99	69.399	ENSLAFG00000001473	RTCA	100	69.399	Loxodonta_africana
ENSHBUG00000002114	rtca	99	69.945	ENSMFAG00000034132	RTCA	100	69.945	Macaca_fascicularis
ENSHBUG00000002114	rtca	99	69.945	ENSMMUG00000019105	RTCA	100	69.945	Macaca_mulatta
ENSHBUG00000002114	rtca	84	69.903	ENSMNEG00000037163	RTCA	100	69.903	Macaca_nemestrina
ENSHBUG00000002114	rtca	99	57.923	ENSMLEG00000042151	RTCA	100	57.923	Mandrillus_leucophaeus
ENSHBUG00000002114	rtca	99	92.857	ENSMAMG00000016536	rtca	100	92.857	Mastacembelus_armatus
ENSHBUG00000002114	rtca	100	99.727	ENSMZEG00005017945	rtca	100	99.727	Maylandia_zebra
ENSHBUG00000002114	rtca	87	67.925	ENSMGAG00000006892	RTCA	99	67.925	Meleagris_gallopavo
ENSHBUG00000002114	rtca	99	69.945	ENSMAUG00000008488	Rtca	100	69.945	Mesocricetus_auratus
ENSHBUG00000002114	rtca	84	70.874	ENSMICG00000008643	RTCA	100	70.874	Microcebus_murinus
ENSHBUG00000002114	rtca	99	68.852	ENSMOCG00000016660	Rtca	100	68.852	Microtus_ochrogaster
ENSHBUG00000002114	rtca	84	89.577	ENSMMOG00000007750	rtca	100	89.577	Mola_mola
ENSHBUG00000002114	rtca	99	69.672	ENSMODG00000003557	RTCA	100	69.672	Monodelphis_domestica
ENSHBUG00000002114	rtca	99	91.484	ENSMALG00000020844	rtca	100	91.484	Monopterus_albus
ENSHBUG00000002114	rtca	99	68.852	MGP_CAROLIEiJ_G0025565	Rtca	100	68.852	Mus_caroli
ENSHBUG00000002114	rtca	99	68.579	ENSMUSG00000000339	Rtca	100	68.579	Mus_musculus
ENSHBUG00000002114	rtca	99	68.852	MGP_PahariEiJ_G0027011	Rtca	100	68.852	Mus_pahari
ENSHBUG00000002114	rtca	99	68.852	MGP_SPRETEiJ_G0026515	Rtca	100	68.852	Mus_spretus
ENSHBUG00000002114	rtca	99	70.219	ENSMPUG00000012119	RTCA	100	70.219	Mustela_putorius_furo
ENSHBUG00000002114	rtca	99	67.030	ENSMLUG00000009922	RTCA	100	67.030	Myotis_lucifugus
ENSHBUG00000002114	rtca	99	69.126	ENSNGAG00000011540	Rtca	99	69.126	Nannospalax_galili
ENSHBUG00000002114	rtca	100	98.907	ENSNBRG00000003062	rtca	100	98.907	Neolamprologus_brichardi
ENSHBUG00000002114	rtca	99	69.945	ENSNLEG00000031426	RTCA	100	69.945	Nomascus_leucogenys
ENSHBUG00000002114	rtca	73	67.407	ENSOPRG00000012092	RTCA	71	67.407	Ochotona_princeps
ENSHBUG00000002114	rtca	95	70.402	ENSODEG00000006990	RTCA	96	70.655	Octodon_degus
ENSHBUG00000002114	rtca	100	98.087	ENSONIG00000007753	rtca	100	98.087	Oreochromis_niloticus
ENSHBUG00000002114	rtca	86	70.662	ENSOANG00000012055	RTCA	98	70.662	Ornithorhynchus_anatinus
ENSHBUG00000002114	rtca	99	70.027	ENSOCUG00000014247	RTCA	100	70.027	Oryctolagus_cuniculus
ENSHBUG00000002114	rtca	99	89.286	ENSORLG00000013605	rtca	100	89.286	Oryzias_latipes
ENSHBUG00000002114	rtca	99	89.560	ENSORLG00020001904	rtca	100	89.560	Oryzias_latipes_hni
ENSHBUG00000002114	rtca	99	89.286	ENSORLG00015021064	rtca	100	89.286	Oryzias_latipes_hsok
ENSHBUG00000002114	rtca	99	88.187	ENSOMEG00000000756	rtca	100	88.187	Oryzias_melastigma
ENSHBUG00000002114	rtca	99	64.754	ENSOGAG00000005627	RTCA	100	64.754	Otolemur_garnettii
ENSHBUG00000002114	rtca	86	70.755	ENSOARG00000018122	RTCA	100	70.755	Ovis_aries
ENSHBUG00000002114	rtca	99	67.282	ENSPPAG00000035119	RTCA	100	69.579	Pan_paniscus
ENSHBUG00000002114	rtca	99	70.572	ENSPPRG00000000350	RTCA	100	70.572	Panthera_pardus
ENSHBUG00000002114	rtca	99	69.945	ENSPTIG00000012816	RTCA	100	69.945	Panthera_tigris_altaica
ENSHBUG00000002114	rtca	99	67.282	ENSPTRG00000001004	RTCA	100	69.579	Pan_troglodytes
ENSHBUG00000002114	rtca	99	69.945	ENSPANG00000000346	RTCA	100	69.945	Papio_anubis
ENSHBUG00000002114	rtca	99	80.495	ENSPKIG00000001653	rtca	100	80.495	Paramormyrops_kingsleyae
ENSHBUG00000002114	rtca	99	66.575	ENSPSIG00000011408	RTCA	100	66.575	Pelodiscus_sinensis
ENSHBUG00000002114	rtca	99	69.126	ENSPEMG00000018582	Rtca	100	69.126	Peromyscus_maniculatus_bairdii
ENSHBUG00000002114	rtca	99	56.164	ENSPMAG00000009110	rtca	99	56.164	Petromyzon_marinus
ENSHBUG00000002114	rtca	99	69.945	ENSPCIG00000007684	RTCA	100	69.945	Phascolarctos_cinereus
ENSHBUG00000002114	rtca	99	91.507	ENSPFOG00000004824	rtca	100	91.507	Poecilia_formosa
ENSHBUG00000002114	rtca	100	91.530	ENSPLAG00000011753	rtca	100	91.530	Poecilia_latipinna
ENSHBUG00000002114	rtca	100	91.530	ENSPMEG00000020469	rtca	100	91.530	Poecilia_mexicana
ENSHBUG00000002114	rtca	100	90.710	ENSPREG00000001365	rtca	100	90.710	Poecilia_reticulata
ENSHBUG00000002114	rtca	99	70.219	ENSPPYG00000001115	RTCA	100	70.219	Pongo_abelii
ENSHBUG00000002114	rtca	99	67.302	ENSPCAG00000005076	RTCA	100	67.302	Procavia_capensis
ENSHBUG00000002114	rtca	99	70.492	ENSPCOG00000005603	RTCA	100	70.492	Propithecus_coquereli
ENSHBUG00000002114	rtca	99	66.053	ENSPVAG00000009478	RTCA	100	66.053	Pteropus_vampyrus
ENSHBUG00000002114	rtca	100	99.727	ENSPNYG00000004722	rtca	100	99.727	Pundamilia_nyererei
ENSHBUG00000002114	rtca	99	80.769	ENSPNAG00000022270	rtca	100	80.769	Pygocentrus_nattereri
ENSHBUG00000002114	rtca	99	68.306	ENSRNOG00000014575	Rtca	100	68.306	Rattus_norvegicus
ENSHBUG00000002114	rtca	99	67.018	ENSRBIG00000041180	RTCA	100	69.256	Rhinopithecus_bieti
ENSHBUG00000002114	rtca	99	69.399	ENSRROG00000024929	RTCA	100	69.399	Rhinopithecus_roxellana
ENSHBUG00000002114	rtca	99	69.126	ENSSBOG00000028626	RTCA	100	69.126	Saimiri_boliviensis_boliviensis
ENSHBUG00000002114	rtca	99	69.945	ENSSHAG00000001758	RTCA	100	69.945	Sarcophilus_harrisii
ENSHBUG00000002114	rtca	100	83.514	ENSSMAG00000014680	rtca	100	83.514	Scophthalmus_maximus
ENSHBUG00000002114	rtca	98	91.061	ENSSDUG00000015585	rtca	97	90.833	Seriola_dumerili
ENSHBUG00000002114	rtca	95	91.117	ENSSLDG00000018985	rtca	95	91.117	Seriola_lalandi_dorsalis
ENSHBUG00000002114	rtca	86	64.984	ENSSARG00000013993	RTCA	100	64.984	Sorex_araneus
ENSHBUG00000002114	rtca	100	92.350	ENSSPAG00000011938	rtca	100	92.350	Stegastes_partitus
ENSHBUG00000002114	rtca	99	70.492	ENSSSCG00000006865	RTCA	100	70.492	Sus_scrofa
ENSHBUG00000002114	rtca	99	68.493	ENSTGUG00000005154	RTCA	100	68.493	Taeniopygia_guttata
ENSHBUG00000002114	rtca	99	89.560	ENSTRUG00000008799	rtca	100	89.560	Takifugu_rubripes
ENSHBUG00000002114	rtca	99	85.440	ENSTNIG00000004725	rtca	100	85.440	Tetraodon_nigroviridis
ENSHBUG00000002114	rtca	59	53.636	ENSTBEG00000000943	RTCA	61	53.636	Tupaia_belangeri
ENSHBUG00000002114	rtca	99	68.074	ENSTTRG00000015327	RTCA	100	68.074	Tursiops_truncatus
ENSHBUG00000002114	rtca	93	69.388	ENSUAMG00000017265	RTCA	96	69.388	Ursus_americanus
ENSHBUG00000002114	rtca	99	69.672	ENSUMAG00000007881	RTCA	100	69.672	Ursus_maritimus
ENSHBUG00000002114	rtca	86	62.461	ENSVPAG00000001039	RTCA	84	62.461	Vicugna_pacos
ENSHBUG00000002114	rtca	99	69.945	ENSVVUG00000022041	RTCA	68	69.945	Vulpes_vulpes
ENSHBUG00000002114	rtca	99	57.766	ENSXETG00000031661	RTCA	99	57.766	Xenopus_tropicalis
ENSHBUG00000002114	rtca	99	79.121	ENSXCOG00000008002	rtca	100	79.121	Xiphophorus_couchianus
ENSHBUG00000002114	rtca	100	90.437	ENSXMAG00000005482	rtca	100	90.437	Xiphophorus_maculatus