EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002120 (Gene tree)
Gene ID: 102295982
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 17292 bases
Position: chrJH425434.1:507326-524617
Accession: 102295982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000000917	GTP_EFTU	PF00009.27	7.1e-63	1	1
ENSHBUP00000000917	GTP_EFTU_D2	PF03144.25	9.5e-17	1	1
ENSHBUP00000000917	EFG_IV	PF03764.18	5.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014645	-	6856	XM_005929955	ENSHBUP00000000917	748 (aa)	XP_005930017	UPI0003BCBE01

Gene Model

Click here to download ENSHBUG00000002120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002120	gfm1	73	38.926	ENSHBUG00000006381	-	72	38.926
ENSHBUG00000002120	gfm1	74	39.597	ENSHBUG00000021382	eef2b	73	39.597
ENSHBUG00000002120	gfm1	98	32.822	ENSHBUG00000011021	gfm2	97	32.950

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002120	gfm1	97	81.267	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSHBUG00000002120	gfm1	92	89.244	ENSAPOG00000016489	gfm1	98	89.244	Acanthochromis_polyacanthus
ENSHBUG00000002120	gfm1	96	82.730	ENSAMEG00000013542	GFM1	95	82.730	Ailuropoda_melanoleuca
ENSHBUG00000002120	gfm1	98	86.736	ENSACIG00000014465	gfm1	99	86.736	Amphilophus_citrinellus
ENSHBUG00000002120	gfm1	100	90.241	ENSAOCG00000006023	gfm1	100	90.241	Amphiprion_ocellaris
ENSHBUG00000002120	gfm1	100	89.973	ENSAPEG00000024499	gfm1	100	89.973	Amphiprion_percula
ENSHBUG00000002120	gfm1	100	90.642	ENSATEG00000013789	gfm1	100	90.642	Anabas_testudineus
ENSHBUG00000002120	gfm1	97	81.379	ENSAPLG00000005022	GFM1	100	81.379	Anas_platyrhynchos
ENSHBUG00000002120	gfm1	97	80.414	ENSACAG00000006829	GFM1	98	80.414	Anolis_carolinensis
ENSHBUG00000002120	gfm1	100	79.494	ENSANAG00000035983	GFM1	100	79.494	Aotus_nancymaae
ENSHBUG00000002120	gfm1	100	99.599	ENSACLG00000016586	gfm1	100	99.599	Astatotilapia_calliptera
ENSHBUG00000002120	gfm1	100	84.759	ENSAMXG00000013435	gfm1	97	86.420	Astyanax_mexicanus
ENSHBUG00000002120	gfm1	96	82.312	ENSBTAG00000027795	GFM1	95	82.312	Bos_taurus
ENSHBUG00000002120	gfm1	94	58.345	WBGene00009246	gfm-1	95	58.006	Caenorhabditis_elegans
ENSHBUG00000002120	gfm1	97	82.094	ENSCJAG00000000363	GFM1	97	82.094	Callithrix_jacchus
ENSHBUG00000002120	gfm1	96	82.591	ENSCAFG00000009006	GFM1	100	82.249	Canis_familiaris
ENSHBUG00000002120	gfm1	99	79.813	ENSCAFG00020005878	GFM1	98	82.591	Canis_lupus_dingo
ENSHBUG00000002120	gfm1	96	82.451	ENSCHIG00000015220	GFM1	95	82.451	Capra_hircus
ENSHBUG00000002120	gfm1	100	79.416	ENSTSYG00000002013	GFM1	100	79.416	Carlito_syrichta
ENSHBUG00000002120	gfm1	96	71.409	ENSCAPG00000005699	GFM1	97	71.409	Cavia_aperea
ENSHBUG00000002120	gfm1	100	79.178	ENSCPOG00000001194	GFM1	100	79.178	Cavia_porcellus
ENSHBUG00000002120	gfm1	100	79.470	ENSCCAG00000025561	GFM1	100	79.470	Cebus_capucinus
ENSHBUG00000002120	gfm1	100	79.494	ENSCATG00000037622	GFM1	100	79.494	Cercocebus_atys
ENSHBUG00000002120	gfm1	97	80.165	ENSCLAG00000002503	GFM1	96	80.165	Chinchilla_lanigera
ENSHBUG00000002120	gfm1	100	79.494	ENSCSAG00000012162	GFM1	100	79.494	Chlorocebus_sabaeus
ENSHBUG00000002120	gfm1	100	70.822	ENSCHOG00000004867	GFM1	100	70.822	Choloepus_hoffmanni
ENSHBUG00000002120	gfm1	100	80.481	ENSCPBG00000018367	GFM1	99	80.481	Chrysemys_picta_bellii
ENSHBUG00000002120	gfm1	94	60.000	ENSCING00000011960	-	92	60.000	Ciona_intestinalis
ENSHBUG00000002120	gfm1	94	60.653	ENSCSAVG00000008514	-	99	59.829	Ciona_savignyi
ENSHBUG00000002120	gfm1	97	81.405	ENSCANG00000031714	GFM1	100	79.494	Colobus_angolensis_palliatus
ENSHBUG00000002120	gfm1	100	79.388	ENSCGRG00001022095	GFM1	100	79.388	Cricetulus_griseus_chok1gshd
ENSHBUG00000002120	gfm1	100	79.388	ENSCGRG00000012043	GFM1	100	79.388	Cricetulus_griseus_crigri
ENSHBUG00000002120	gfm1	97	83.817	ENSCSEG00000017088	gfm1	99	83.817	Cynoglossus_semilaevis
ENSHBUG00000002120	gfm1	100	93.182	ENSCVAG00000004126	gfm1	100	93.182	Cyprinodon_variegatus
ENSHBUG00000002120	gfm1	100	82.620	ENSDARG00000063624	gfm1	100	82.620	Danio_rerio
ENSHBUG00000002120	gfm1	55	79.951	ENSDNOG00000016385	-	100	79.951	Dasypus_novemcinctus
ENSHBUG00000002120	gfm1	100	78.752	ENSDORG00000014165	Gfm1	100	78.752	Dipodomys_ordii
ENSHBUG00000002120	gfm1	95	68.547	FBgn0263133	mEFG1	95	68.547	Drosophila_melanogaster
ENSHBUG00000002120	gfm1	96	74.064	ENSETEG00000019197	GFM1	95	74.064	Echinops_telfairi
ENSHBUG00000002120	gfm1	90	63.259	ENSEBUG00000012794	gfm1	100	63.259	Eptatretus_burgeri
ENSHBUG00000002120	gfm1	96	61.111	ENSEEUG00000000429	GFM1	99	61.111	Erinaceus_europaeus
ENSHBUG00000002120	gfm1	100	86.096	ENSELUG00000014728	gfm1	100	86.096	Esox_lucius
ENSHBUG00000002120	gfm1	97	81.680	ENSFCAG00000013291	GFM1	96	81.680	Felis_catus
ENSHBUG00000002120	gfm1	90	81.185	ENSFALG00000007619	GFM1	100	81.185	Ficedula_albicollis
ENSHBUG00000002120	gfm1	100	79.045	ENSFDAG00000016559	GFM1	100	79.045	Fukomys_damarensis
ENSHBUG00000002120	gfm1	100	92.112	ENSFHEG00000006091	gfm1	100	92.112	Fundulus_heteroclitus
ENSHBUG00000002120	gfm1	97	86.520	ENSGMOG00000010161	gfm1	100	86.520	Gadus_morhua
ENSHBUG00000002120	gfm1	97	81.103	ENSGALG00000009634	GFM1	98	81.103	Gallus_gallus
ENSHBUG00000002120	gfm1	100	90.775	ENSGAFG00000012527	gfm1	100	90.775	Gambusia_affinis
ENSHBUG00000002120	gfm1	100	89.720	ENSGACG00000009864	gfm1	100	89.720	Gasterosteus_aculeatus
ENSHBUG00000002120	gfm1	97	81.543	ENSGGOG00000003085	GFM1	100	79.494	Gorilla_gorilla
ENSHBUG00000002120	gfm1	97	80.716	ENSHGLG00000016855	GFM1	100	78.647	Heterocephalus_glaber_female
ENSHBUG00000002120	gfm1	97	80.716	ENSHGLG00100013049	GFM1	100	78.647	Heterocephalus_glaber_male
ENSHBUG00000002120	gfm1	100	89.706	ENSHCOG00000007638	gfm1	100	89.706	Hippocampus_comes
ENSHBUG00000002120	gfm1	100	84.759	ENSIPUG00000005873	gfm1	100	84.759	Ictalurus_punctatus
ENSHBUG00000002120	gfm1	99	79.032	ENSSTOG00000010150	GFM1	100	79.032	Ictidomys_tridecemlineatus
ENSHBUG00000002120	gfm1	97	80.828	ENSJJAG00000016447	Gfm1	97	80.828	Jaculus_jaculus
ENSHBUG00000002120	gfm1	100	88.102	ENSKMAG00000020768	gfm1	100	88.102	Kryptolebias_marmoratus
ENSHBUG00000002120	gfm1	94	91.583	ENSLBEG00000021315	gfm1	100	91.583	Labrus_bergylta
ENSHBUG00000002120	gfm1	100	80.348	ENSLACG00000012295	GFM1	100	80.348	Latimeria_chalumnae
ENSHBUG00000002120	gfm1	97	80.738	ENSLOCG00000003778	gfm1	100	80.738	Lepisosteus_oculatus
ENSHBUG00000002120	gfm1	99	77.467	ENSLAFG00000010945	GFM1	99	78.611	Loxodonta_africana
ENSHBUG00000002120	gfm1	97	81.405	ENSMFAG00000035731	GFM1	97	81.405	Macaca_fascicularis
ENSHBUG00000002120	gfm1	97	81.405	ENSMMUG00000004961	GFM1	97	81.405	Macaca_mulatta
ENSHBUG00000002120	gfm1	100	79.361	ENSMNEG00000033245	GFM1	100	79.361	Macaca_nemestrina
ENSHBUG00000002120	gfm1	97	79.724	ENSMLEG00000030908	GFM1	99	79.459	Mandrillus_leucophaeus
ENSHBUG00000002120	gfm1	100	91.310	ENSMAMG00000011760	gfm1	100	91.310	Mastacembelus_armatus
ENSHBUG00000002120	gfm1	100	99.733	ENSMZEG00005016639	gfm1	100	99.733	Maylandia_zebra
ENSHBUG00000002120	gfm1	97	81.077	ENSMGAG00000010641	GFM1	97	81.077	Meleagris_gallopavo
ENSHBUG00000002120	gfm1	97	81.931	ENSMAUG00000000611	Gfm1	97	81.931	Mesocricetus_auratus
ENSHBUG00000002120	gfm1	97	82.369	ENSMICG00000049086	GFM1	96	82.369	Microcebus_murinus
ENSHBUG00000002120	gfm1	96	82.476	ENSMOCG00000000465	Gfm1	96	82.476	Microtus_ochrogaster
ENSHBUG00000002120	gfm1	99	90.000	ENSMMOG00000012538	gfm1	99	90.000	Mola_mola
ENSHBUG00000002120	gfm1	99	80.597	ENSMODG00000015673	GFM1	99	80.597	Monodelphis_domestica
ENSHBUG00000002120	gfm1	96	89.958	ENSMALG00000012508	gfm1	95	89.958	Monopterus_albus
ENSHBUG00000002120	gfm1	96	82.287	MGP_CAROLIEiJ_G0025052	Gfm1	95	82.287	Mus_caroli
ENSHBUG00000002120	gfm1	96	82.287	ENSMUSG00000027774	Gfm1	95	82.287	Mus_musculus
ENSHBUG00000002120	gfm1	97	81.517	MGP_PahariEiJ_G0026495	Gfm1	97	81.517	Mus_pahari
ENSHBUG00000002120	gfm1	96	82.287	MGP_SPRETEiJ_G0025994	Gfm1	95	82.287	Mus_spretus
ENSHBUG00000002120	gfm1	97	81.818	ENSMPUG00000002859	GFM1	96	81.818	Mustela_putorius_furo
ENSHBUG00000002120	gfm1	97	82.231	ENSMLUG00000000452	GFM1	96	82.231	Myotis_lucifugus
ENSHBUG00000002120	gfm1	100	78.400	ENSNGAG00000012375	Gfm1	100	78.400	Nannospalax_galili
ENSHBUG00000002120	gfm1	97	98.626	ENSNBRG00000004631	gfm1	99	98.626	Neolamprologus_brichardi
ENSHBUG00000002120	gfm1	97	81.543	ENSNLEG00000004176	GFM1	100	79.494	Nomascus_leucogenys
ENSHBUG00000002120	gfm1	91	72.794	ENSMEUG00000007784	GFM1	99	72.794	Notamacropus_eugenii
ENSHBUG00000002120	gfm1	98	80.518	ENSOPRG00000009860	GFM1	99	80.518	Ochotona_princeps
ENSHBUG00000002120	gfm1	97	81.267	ENSODEG00000004316	GFM1	100	79.045	Octodon_degus
ENSHBUG00000002120	gfm1	100	98.663	ENSONIG00000003772	gfm1	100	98.663	Oreochromis_niloticus
ENSHBUG00000002120	gfm1	97	82.005	ENSOCUG00000013561	GFM1	97	82.005	Oryctolagus_cuniculus
ENSHBUG00000002120	gfm1	95	91.525	ENSORLG00000006487	gfm1	100	91.525	Oryzias_latipes
ENSHBUG00000002120	gfm1	100	90.107	ENSORLG00020003362	gfm1	100	90.107	Oryzias_latipes_hni
ENSHBUG00000002120	gfm1	100	90.241	ENSORLG00015005829	gfm1	100	90.241	Oryzias_latipes_hsok
ENSHBUG00000002120	gfm1	100	92.246	ENSOMEG00000012894	gfm1	100	92.246	Oryzias_melastigma
ENSHBUG00000002120	gfm1	97	81.129	ENSOGAG00000008298	GFM1	96	81.129	Otolemur_garnettii
ENSHBUG00000002120	gfm1	96	81.553	ENSOARG00000002409	GFM1	99	81.553	Ovis_aries
ENSHBUG00000002120	gfm1	97	81.543	ENSPPAG00000033881	GFM1	100	79.494	Pan_paniscus
ENSHBUG00000002120	gfm1	97	81.680	ENSPPRG00000009281	GFM1	96	81.680	Panthera_pardus
ENSHBUG00000002120	gfm1	97	81.543	ENSPTIG00000012416	GFM1	96	81.543	Panthera_tigris_altaica
ENSHBUG00000002120	gfm1	97	81.543	ENSPTRG00000015570	GFM1	100	79.494	Pan_troglodytes
ENSHBUG00000002120	gfm1	100	79.361	ENSPANG00000016512	GFM1	100	79.361	Papio_anubis
ENSHBUG00000002120	gfm1	100	83.422	ENSPKIG00000004876	gfm1	100	83.422	Paramormyrops_kingsleyae
ENSHBUG00000002120	gfm1	100	81.283	ENSPSIG00000012567	GFM1	99	81.283	Pelodiscus_sinensis
ENSHBUG00000002120	gfm1	97	88.414	ENSPMGG00000014068	gfm1	100	88.414	Periophthalmus_magnuspinnatus
ENSHBUG00000002120	gfm1	100	79.494	ENSPEMG00000008942	Gfm1	100	79.494	Peromyscus_maniculatus_bairdii
ENSHBUG00000002120	gfm1	86	78.281	ENSPCIG00000020195	GFM1	98	79.650	Phascolarctos_cinereus
ENSHBUG00000002120	gfm1	100	91.578	ENSPFOG00000011022	gfm1	100	91.578	Poecilia_formosa
ENSHBUG00000002120	gfm1	97	92.541	ENSPLAG00000019585	gfm1	100	91.152	Poecilia_latipinna
ENSHBUG00000002120	gfm1	100	91.444	ENSPMEG00000012376	gfm1	100	91.444	Poecilia_mexicana
ENSHBUG00000002120	gfm1	100	91.310	ENSPREG00000001332	gfm1	95	91.310	Poecilia_reticulata
ENSHBUG00000002120	gfm1	97	81.267	ENSPPYG00000014244	GFM1	100	79.228	Pongo_abelii
ENSHBUG00000002120	gfm1	94	80.370	ENSPCAG00000008934	GFM1	100	80.370	Procavia_capensis
ENSHBUG00000002120	gfm1	97	81.680	ENSPCOG00000022259	GFM1	96	81.680	Propithecus_coquereli
ENSHBUG00000002120	gfm1	97	80.992	ENSPVAG00000013605	GFM1	96	80.992	Pteropus_vampyrus
ENSHBUG00000002120	gfm1	100	99.465	ENSPNYG00000006037	gfm1	100	99.465	Pundamilia_nyererei
ENSHBUG00000002120	gfm1	100	84.759	ENSPNAG00000001237	gfm1	100	84.759	Pygocentrus_nattereri
ENSHBUG00000002120	gfm1	96	82.427	ENSRNOG00000012873	Gfm1	95	82.427	Rattus_norvegicus
ENSHBUG00000002120	gfm1	97	81.267	ENSRBIG00000031363	GFM1	100	79.361	Rhinopithecus_bieti
ENSHBUG00000002120	gfm1	97	81.405	ENSRROG00000031081	GFM1	100	79.494	Rhinopithecus_roxellana
ENSHBUG00000002120	gfm1	96	55.878	YLR069C	-	94	55.878	Saccharomyces_cerevisiae
ENSHBUG00000002120	gfm1	97	81.818	ENSSBOG00000023252	GFM1	97	81.818	Saimiri_boliviensis_boliviensis
ENSHBUG00000002120	gfm1	98	81.905	ENSSHAG00000017772	GFM1	98	81.905	Sarcophilus_harrisii
ENSHBUG00000002120	gfm1	100	83.979	ENSSFOG00015003117	gfm1	100	83.979	Scleropages_formosus
ENSHBUG00000002120	gfm1	100	89.439	ENSSMAG00000013221	gfm1	100	89.439	Scophthalmus_maximus
ENSHBUG00000002120	gfm1	100	93.048	ENSSDUG00000018665	gfm1	100	93.048	Seriola_dumerili
ENSHBUG00000002120	gfm1	100	92.914	ENSSLDG00000020606	gfm1	100	92.914	Seriola_lalandi_dorsalis
ENSHBUG00000002120	gfm1	97	79.586	ENSSPUG00000018686	GFM1	98	79.586	Sphenodon_punctatus
ENSHBUG00000002120	gfm1	100	93.182	ENSSPAG00000008800	gfm1	100	93.182	Stegastes_partitus
ENSHBUG00000002120	gfm1	96	81.894	ENSSSCG00000025651	GFM1	95	81.894	Sus_scrofa
ENSHBUG00000002120	gfm1	100	87.834	ENSTRUG00000009244	gfm1	100	87.834	Takifugu_rubripes
ENSHBUG00000002120	gfm1	100	90.241	ENSTNIG00000007729	gfm1	100	90.241	Tetraodon_nigroviridis
ENSHBUG00000002120	gfm1	90	73.630	ENSTBEG00000017404	GFM1	89	73.630	Tupaia_belangeri
ENSHBUG00000002120	gfm1	96	82.173	ENSTTRG00000001735	GFM1	95	82.173	Tursiops_truncatus
ENSHBUG00000002120	gfm1	97	81.956	ENSUAMG00000026381	GFM1	96	81.956	Ursus_americanus
ENSHBUG00000002120	gfm1	97	81.956	ENSUMAG00000011268	GFM1	96	81.956	Ursus_maritimus
ENSHBUG00000002120	gfm1	97	78.345	ENSVPAG00000009444	GFM1	96	78.345	Vicugna_pacos
ENSHBUG00000002120	gfm1	96	82.402	ENSVVUG00000020091	GFM1	100	81.953	Vulpes_vulpes
ENSHBUG00000002120	gfm1	100	82.048	ENSXETG00000032551	GFM1	100	82.048	Xenopus_tropicalis
ENSHBUG00000002120	gfm1	54	89.136	ENSXCOG00000012590	gfm1	93	89.136	Xiphophorus_couchianus
ENSHBUG00000002120	gfm1	100	91.176	ENSXMAG00000000261	gfm1	100	91.176	Xiphophorus_maculatus