EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002307 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 11258 bases
Position: chrJH425468.1:867891-879148
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	1	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	2	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	3	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	4	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	5	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	6	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	7	8
ENSHBUP00000022189	zf-C2H2	PF00096.26	3.3e-49	8	8
ENSHBUP00000001132	zf-C2H2	PF00096.26	7.8e-31	1	5
ENSHBUP00000001132	zf-C2H2	PF00096.26	7.8e-31	2	5
ENSHBUP00000001132	zf-C2H2	PF00096.26	7.8e-31	3	5
ENSHBUP00000001132	zf-C2H2	PF00096.26	7.8e-31	4	5
ENSHBUP00000001132	zf-C2H2	PF00096.26	7.8e-31	5	5
ENSHBUP00000022189	zf-met	PF12874.7	1.4e-11	1	2
ENSHBUP00000022189	zf-met	PF12874.7	1.4e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014299	-	2187	-	ENSHBUP00000022189	728 (aa)	-	-
ENSHBUT00000014307	-	966	-	ENSHBUP00000001132	321 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000002307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002307	-	79	43.284	ENSHBUG00000019090	ZNF319	88	35.780
ENSHBUG00000002307	-	77	45.865	ENSHBUG00000015404	-	87	31.116
ENSHBUG00000002307	-	69	41.497	ENSHBUG00000016927	-	75	35.014
ENSHBUG00000002307	-	73	41.765	ENSHBUG00000002530	-	62	41.765
ENSHBUG00000002307	-	73	44.253	ENSHBUG00000002533	-	68	44.253
ENSHBUG00000002307	-	75	37.674	ENSHBUG00000013296	-	99	45.946
ENSHBUG00000002307	-	71	48.684	ENSHBUG00000013292	-	65	48.684
ENSHBUG00000002307	-	69	42.958	ENSHBUG00000005451	gfi1b	70	39.394
ENSHBUG00000002307	-	69	43.721	ENSHBUG00000014725	-	87	43.721
ENSHBUG00000002307	-	71	47.619	ENSHBUG00000003529	-	92	53.425
ENSHBUG00000002307	-	73	46.957	ENSHBUG00000007068	-	58	46.957
ENSHBUG00000002307	-	82	48.026	ENSHBUG00000020071	-	54	48.026
ENSHBUG00000002307	-	71	43.662	ENSHBUG00000002881	-	61	43.662
ENSHBUG00000002307	-	70	45.763	ENSHBUG00000002889	-	55	45.578
ENSHBUG00000002307	-	73	32.850	ENSHBUG00000009720	-	65	34.951
ENSHBUG00000002307	-	73	46.000	ENSHBUG00000006984	-	99	47.143
ENSHBUG00000002307	-	74	44.444	ENSHBUG00000015803	-	90	47.205
ENSHBUG00000002307	-	70	39.024	ENSHBUG00000000636	-	51	42.500
ENSHBUG00000002307	-	77	46.774	ENSHBUG00000021028	-	81	46.774
ENSHBUG00000002307	-	67	39.303	ENSHBUG00000016384	-	88	34.758
ENSHBUG00000002307	-	68	43.781	ENSHBUG00000000146	-	78	43.781
ENSHBUG00000002307	-	68	47.525	ENSHBUG00000012758	-	98	41.223
ENSHBUG00000002307	-	70	41.818	ENSHBUG00000018885	-	73	35.103
ENSHBUG00000002307	-	70	46.667	ENSHBUG00000013490	-	82	37.956
ENSHBUG00000002307	-	70	40.930	ENSHBUG00000016546	-	76	35.242
ENSHBUG00000002307	-	77	36.406	ENSHBUG00000004217	-	68	31.282
ENSHBUG00000002307	-	66	46.667	ENSHBUG00000017924	-	56	46.667
ENSHBUG00000002307	-	69	44.667	ENSHBUG00000012432	-	69	44.667
ENSHBUG00000002307	-	73	35.859	ENSHBUG00000014494	-	68	35.669
ENSHBUG00000002307	-	73	44.737	ENSHBUG00000002393	-	75	38.340
ENSHBUG00000002307	-	75	47.312	ENSHBUG00000013542	-	67	45.625
ENSHBUG00000002307	-	68	43.590	ENSHBUG00000000099	-	90	43.590
ENSHBUG00000002307	-	73	44.928	ENSHBUG00000005848	-	87	44.928
ENSHBUG00000002307	-	79	51.553	ENSHBUG00000015942	-	97	50.394
ENSHBUG00000002307	-	69	42.697	ENSHBUG00000009274	-	97	42.767
ENSHBUG00000002307	-	67	47.458	ENSHBUG00000017251	-	98	47.458
ENSHBUG00000002307	-	72	49.640	ENSHBUG00000004718	-	98	40.441
ENSHBUG00000002307	-	75	41.007	ENSHBUG00000019101	-	59	41.007
ENSHBUG00000002307	-	68	48.077	ENSHBUG00000021906	-	66	50.000
ENSHBUG00000002307	-	81	42.718	ENSHBUG00000023077	-	52	42.718
ENSHBUG00000002307	-	64	47.561	ENSHBUG00000008502	-	83	47.561
ENSHBUG00000002307	-	74	44.749	ENSHBUG00000021003	-	95	44.749
ENSHBUG00000002307	-	88	44.295	ENSHBUG00000022063	-	82	43.478
ENSHBUG00000002307	-	76	45.752	ENSHBUG00000017542	znf526	55	43.103
ENSHBUG00000002307	-	69	42.922	ENSHBUG00000000820	-	99	44.375
ENSHBUG00000002307	-	76	38.235	ENSHBUG00000018577	PRDM15	50	38.235
ENSHBUG00000002307	-	97	50.652	ENSHBUG00000002320	-	99	50.437
ENSHBUG00000002307	-	70	43.243	ENSHBUG00000013518	-	98	39.932
ENSHBUG00000002307	-	79	43.373	ENSHBUG00000006977	-	66	43.373
ENSHBUG00000002307	-	69	47.445	ENSHBUG00000012230	-	67	47.445
ENSHBUG00000002307	-	77	47.581	ENSHBUG00000002526	-	65	47.581
ENSHBUG00000002307	-	68	50.505	ENSHBUG00000021970	-	91	44.565
ENSHBUG00000002307	-	76	44.393	ENSHBUG00000002961	-	95	44.393
ENSHBUG00000002307	-	68	50.000	ENSHBUG00000011194	-	88	42.857
ENSHBUG00000002307	-	72	42.500	ENSHBUG00000015166	-	92	39.645
ENSHBUG00000002307	-	67	45.087	ENSHBUG00000017869	-	77	45.223
ENSHBUG00000002307	-	68	46.565	ENSHBUG00000017864	-	88	48.438
ENSHBUG00000002307	-	74	40.909	ENSHBUG00000013194	-	97	47.692
ENSHBUG00000002307	-	83	41.221	ENSHBUG00000012007	-	71	40.183
ENSHBUG00000002307	-	73	44.390	ENSHBUG00000011725	-	70	44.390
ENSHBUG00000002307	-	70	40.828	ENSHBUG00000002841	-	77	40.845
ENSHBUG00000002307	-	69	38.060	ENSHBUG00000009815	znf319b	82	38.060
ENSHBUG00000002307	-	68	48.980	ENSHBUG00000017372	-	87	46.729
ENSHBUG00000002307	-	73	42.254	ENSHBUG00000023209	-	99	42.254
ENSHBUG00000002307	-	84	43.204	ENSHBUG00000001075	-	93	44.388
ENSHBUG00000002307	-	75	44.076	ENSHBUG00000006863	-	92	40.541
ENSHBUG00000002307	-	68	43.275	ENSHBUG00000011944	-	68	38.764
ENSHBUG00000002307	-	67	42.308	ENSHBUG00000020527	-	96	41.875
ENSHBUG00000002307	-	68	45.349	ENSHBUG00000002541	-	95	39.056
ENSHBUG00000002307	-	78	39.655	ENSHBUG00000003165	-	94	39.655
ENSHBUG00000002307	-	79	43.379	ENSHBUG00000012984	-	81	43.379
ENSHBUG00000002307	-	76	33.051	ENSHBUG00000017445	zbtb41	53	33.051
ENSHBUG00000002307	-	68	49.286	ENSHBUG00000015226	-	59	40.964
ENSHBUG00000002307	-	86	37.634	ENSHBUG00000012215	-	95	46.821
ENSHBUG00000002307	-	72	45.946	ENSHBUG00000002878	-	71	37.885
ENSHBUG00000002307	-	80	44.186	ENSHBUG00000016334	-	63	37.736
ENSHBUG00000002307	-	74	45.349	ENSHBUG00000019377	-	61	45.349
ENSHBUG00000002307	-	83	42.152	ENSHBUG00000003057	-	92	48.333
ENSHBUG00000002307	-	68	43.787	ENSHBUG00000022073	-	66	39.919
ENSHBUG00000002307	-	72	38.806	ENSHBUG00000016621	scrt1b	77	38.806
ENSHBUG00000002307	-	74	41.827	ENSHBUG00000018916	-	64	41.827
ENSHBUG00000002307	-	72	42.365	ENSHBUG00000015393	-	93	33.735
ENSHBUG00000002307	-	79	49.057	ENSHBUG00000009941	-	70	49.057
ENSHBUG00000002307	-	69	45.000	ENSHBUG00000006662	-	75	45.000
ENSHBUG00000002307	-	77	42.353	ENSHBUG00000004077	-	100	41.509
ENSHBUG00000002307	-	71	41.606	ENSHBUG00000009953	-	62	41.606
ENSHBUG00000002307	-	74	44.186	ENSHBUG00000015719	-	95	44.186
ENSHBUG00000002307	-	76	43.256	ENSHBUG00000005809	-	99	43.256
ENSHBUG00000002307	-	80	45.652	ENSHBUG00000009837	znf236	69	38.739
ENSHBUG00000002307	-	68	43.781	ENSHBUG00000019800	-	95	44.149
ENSHBUG00000002307	-	68	44.203	ENSHBUG00000020544	-	98	41.441
ENSHBUG00000002307	-	69	41.414	ENSHBUG00000013467	-	51	41.414
ENSHBUG00000002307	-	73	43.704	ENSHBUG00000006656	-	60	43.704
ENSHBUG00000002307	-	76	46.429	ENSHBUG00000012565	-	92	46.429
ENSHBUG00000002307	-	77	41.892	ENSHBUG00000023375	prdm5	71	41.892
ENSHBUG00000002307	-	70	45.385	ENSHBUG00000007316	-	70	45.385
ENSHBUG00000002307	-	68	41.401	ENSHBUG00000000731	-	94	34.766
ENSHBUG00000002307	-	68	44.604	ENSHBUG00000013065	-	66	40.719
ENSHBUG00000002307	-	70	39.831	ENSHBUG00000004840	znf646	88	35.433
ENSHBUG00000002307	-	75	42.405	ENSHBUG00000013264	-	87	42.405
ENSHBUG00000002307	-	76	42.466	ENSHBUG00000006250	-	92	38.360
ENSHBUG00000002307	-	73	34.694	ENSHBUG00000005726	-	61	34.694
ENSHBUG00000002307	-	69	40.092	ENSHBUG00000003449	-	95	36.750
ENSHBUG00000002307	-	67	40.741	ENSHBUG00000007764	snai2	70	35.577
ENSHBUG00000002307	-	71	39.286	ENSHBUG00000006238	-	93	42.953
ENSHBUG00000002307	-	66	41.509	ENSHBUG00000012492	scrt2	68	38.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002307	-	78	43.429	ENSAPEG00000021575	-	61	43.429	Amphiprion_percula
ENSHBUG00000002307	-	100	99.451	ENSACLG00000017925	-	100	99.451	Astatotilapia_calliptera
ENSHBUG00000002307	-	70	45.238	ENSAMXG00000041609	-	92	47.586	Astyanax_mexicanus
ENSHBUG00000002307	-	81	50.331	ENSAMXG00000037709	-	82	50.331	Astyanax_mexicanus
ENSHBUG00000002307	-	73	44.860	ENSCSAVG00000007918	-	100	45.161	Ciona_savignyi
ENSHBUG00000002307	-	100	99.451	ENSMZEG00005024424	-	100	99.451	Maylandia_zebra
ENSHBUG00000002307	-	71	44.886	ENSOANG00000005971	-	65	44.886	Ornithorhynchus_anatinus
ENSHBUG00000002307	-	77	35.783	ENSPMEG00000014701	-	80	35.783	Poecilia_mexicana
ENSHBUG00000002307	-	99	68.044	ENSSDUG00000002174	-	100	67.764	Seriola_dumerili
ENSHBUG00000002307	-	74	44.186	ENSSLDG00000010390	-	97	45.528	Seriola_lalandi_dorsalis
ENSHBUG00000002307	-	100	67.764	ENSSLDG00000002776	-	100	67.764	Seriola_lalandi_dorsalis
ENSHBUG00000002307	-	82	41.667	ENSSPAG00000008958	-	99	41.667	Stegastes_partitus
ENSHBUG00000002307	-	82	48.227	ENSTGUG00000015090	-	99	48.227	Taeniopygia_guttata