EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002388 (Gene tree)
Gene ID: 102291772
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4285 bases
Position: chrJH425541.1:353663-357947
Accession: 102291772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022237	RRM_1	PF00076.22	1.5e-15	1	1
ENSHBUP00000001210	RRM_1	PF00076.22	4.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014181	PABPN1L-202	2544	XM_005937181	ENSHBUP00000022237	262 (aa)	XP_005937243	UPI0003BD4FA2
ENSHBUT00000014174	PABPN1L-201	3123	-	ENSHBUP00000001210	248 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000002388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002388	PABPN1L	65	58.564	ENSHBUG00000019523	pabpn1	82	56.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002388	PABPN1L	71	50.746	ENSG00000205022	PABPN1L	72	49.000	Homo_sapiens
ENSHBUG00000002388	PABPN1L	91	92.500	ENSAPOG00000000685	PABPN1L	78	92.500	Acanthochromis_polyacanthus
ENSHBUG00000002388	PABPN1L	91	94.118	ENSACIG00000021400	PABPN1L	98	94.118	Amphilophus_citrinellus
ENSHBUG00000002388	PABPN1L	100	93.916	ENSAOCG00000019844	PABPN1L	100	93.156	Amphiprion_ocellaris
ENSHBUG00000002388	PABPN1L	100	93.536	ENSAPEG00000019534	PABPN1L	100	92.776	Amphiprion_percula
ENSHBUG00000002388	PABPN1L	93	90.574	ENSATEG00000011646	PABPN1L	98	90.574	Anabas_testudineus
ENSHBUG00000002388	PABPN1L	66	56.897	ENSACAG00000013250	PABPN1L	89	56.897	Anolis_carolinensis
ENSHBUG00000002388	PABPN1L	75	52.500	ENSANAG00000038178	PABPN1L	75	50.485	Aotus_nancymaae
ENSHBUG00000002388	PABPN1L	100	99.618	ENSACLG00000025147	PABPN1L	100	99.618	Astatotilapia_calliptera
ENSHBUG00000002388	PABPN1L	55	72.917	ENSAMXG00000010873	PABPN1L	54	74.648	Astyanax_mexicanus
ENSHBUG00000002388	PABPN1L	71	54.545	ENSCJAG00000045284	PABPN1L	72	52.500	Callithrix_jacchus
ENSHBUG00000002388	PABPN1L	70	48.404	ENSCAPG00000007240	PABPN1L	55	55.484	Cavia_aperea
ENSHBUG00000002388	PABPN1L	71	47.120	ENSCPOG00000025951	PABPN1L	56	54.545	Cavia_porcellus
ENSHBUG00000002388	PABPN1L	76	53.695	ENSCCAG00000027631	PABPN1L	70	53.234	Cebus_capucinus
ENSHBUG00000002388	PABPN1L	71	51.485	ENSCATG00000031060	PABPN1L	73	51.741	Cercocebus_atys
ENSHBUG00000002388	PABPN1L	58	52.866	ENSCLAG00000000704	PABPN1L	76	45.455	Chinchilla_lanigera
ENSHBUG00000002388	PABPN1L	71	49.309	ENSCSAG00000002881	PABPN1L	51	59.333	Chlorocebus_sabaeus
ENSHBUG00000002388	PABPN1L	71	49.510	ENSCANG00000039336	PABPN1L	72	48.259	Colobus_angolensis_palliatus
ENSHBUG00000002388	PABPN1L	72	49.020	ENSCGRG00001013211	Pabpn1l	78	45.116	Cricetulus_griseus_chok1gshd
ENSHBUG00000002388	PABPN1L	72	49.020	ENSCGRG00000015868	Pabpn1l	78	45.116	Cricetulus_griseus_crigri
ENSHBUG00000002388	PABPN1L	100	84.030	ENSCSEG00000001142	pabpn1l	100	84.030	Cynoglossus_semilaevis
ENSHBUG00000002388	PABPN1L	100	87.833	ENSCVAG00000015547	PABPN1L	100	88.593	Cyprinodon_variegatus
ENSHBUG00000002388	PABPN1L	66	52.874	ENSDNOG00000034677	PABPN1L	50	60.000	Dasypus_novemcinctus
ENSHBUG00000002388	PABPN1L	73	48.731	ENSEASG00005000777	PABPN1L	71	48.731	Equus_asinus_asinus
ENSHBUG00000002388	PABPN1L	73	50.254	ENSECAG00000000378	PABPN1L	71	48.731	Equus_caballus
ENSHBUG00000002388	PABPN1L	96	66.008	ENSELUG00000018385	PABPN1L	99	65.649	Esox_lucius
ENSHBUG00000002388	PABPN1L	63	52.632	ENSFCAG00000010465	PABPN1L	73	47.783	Felis_catus
ENSHBUG00000002388	PABPN1L	61	60.625	ENSFALG00000003319	PABPN1L	65	58.750	Ficedula_albicollis
ENSHBUG00000002388	PABPN1L	58	55.346	ENSFDAG00000021067	PABPN1L	62	51.190	Fukomys_damarensis
ENSHBUG00000002388	PABPN1L	100	88.931	ENSFHEG00000018295	PABPN1L	100	88.931	Fundulus_heteroclitus
ENSHBUG00000002388	PABPN1L	100	75.564	ENSGMOG00000001475	PABPN1L	100	78.195	Gadus_morhua
ENSHBUG00000002388	PABPN1L	55	61.111	ENSGALG00000006242	PABPN1L	73	61.538	Gallus_gallus
ENSHBUG00000002388	PABPN1L	100	88.213	ENSGAFG00000012565	PABPN1L	100	88.973	Gambusia_affinis
ENSHBUG00000002388	PABPN1L	100	85.768	ENSGACG00000015428	PABPN1L	100	85.768	Gasterosteus_aculeatus
ENSHBUG00000002388	PABPN1L	57	66.000	ENSGAGG00000010613	PABPN1L	50	62.000	Gopherus_agassizii
ENSHBUG00000002388	PABPN1L	71	51.724	ENSGGOG00000012670	PABPN1L	73	50.495	Gorilla_gorilla
ENSHBUG00000002388	PABPN1L	71	48.241	ENSHGLG00000014207	PABPN1L	55	56.164	Heterocephalus_glaber_female
ENSHBUG00000002388	PABPN1L	71	48.241	ENSHGLG00100005230	PABPN1L	55	56.164	Heterocephalus_glaber_male
ENSHBUG00000002388	PABPN1L	100	85.075	ENSHCOG00000004151	PABPN1L	99	85.075	Hippocampus_comes
ENSHBUG00000002388	PABPN1L	66	65.517	ENSIPUG00000023583	PABPN1L	87	65.556	Ictalurus_punctatus
ENSHBUG00000002388	PABPN1L	73	48.168	ENSJJAG00000006433	Pabpn1l	73	46.569	Jaculus_jaculus
ENSHBUG00000002388	PABPN1L	82	89.302	ENSKMAG00000001112	PABPN1L	94	90.141	Kryptolebias_marmoratus
ENSHBUG00000002388	PABPN1L	100	85.660	ENSLBEG00000011647	PABPN1L	97	89.434	Labrus_bergylta
ENSHBUG00000002388	PABPN1L	50	58.993	ENSLAFG00000025902	-	56	58.993	Loxodonta_africana
ENSHBUG00000002388	PABPN1L	71	51.741	ENSMFAG00000002924	PABPN1L	73	50.500	Macaca_fascicularis
ENSHBUG00000002388	PABPN1L	71	52.000	ENSMMUG00000012438	PABPN1L	73	52.000	Macaca_mulatta
ENSHBUG00000002388	PABPN1L	71	51.741	ENSMNEG00000044808	PABPN1L	73	50.500	Macaca_nemestrina
ENSHBUG00000002388	PABPN1L	71	50.746	ENSMLEG00000032667	PABPN1L	73	49.500	Mandrillus_leucophaeus
ENSHBUG00000002388	PABPN1L	100	99.618	ENSMZEG00005002186	PABPN1L	100	99.618	Maylandia_zebra
ENSHBUG00000002388	PABPN1L	73	46.465	ENSMAUG00000014032	Pabpn1l	55	53.020	Mesocricetus_auratus
ENSHBUG00000002388	PABPN1L	71	48.276	ENSMICG00000028179	PABPN1L	54	56.000	Microcebus_murinus
ENSHBUG00000002388	PABPN1L	72	44.444	ENSMOCG00000007955	Pabpn1l	57	50.980	Microtus_ochrogaster
ENSHBUG00000002388	PABPN1L	76	91.960	ENSMMOG00000017714	PABPN1L	86	91.960	Mola_mola
ENSHBUG00000002388	PABPN1L	100	89.695	ENSMALG00000016926	PABPN1L	100	89.695	Monopterus_albus
ENSHBUG00000002388	PABPN1L	68	45.411	MGP_CAROLIEiJ_G0031670	Pabpn1l	57	49.359	Mus_caroli
ENSHBUG00000002388	PABPN1L	76	46.226	ENSMUSG00000069867	Pabpn1l	58	50.617	Mus_musculus
ENSHBUG00000002388	PABPN1L	68	46.860	MGP_PahariEiJ_G0023268	Pabpn1l	79	43.519	Mus_pahari
ENSHBUG00000002388	PABPN1L	76	45.755	MGP_SPRETEiJ_G0032788	Pabpn1l	58	50.617	Mus_spretus
ENSHBUG00000002388	PABPN1L	76	45.283	ENSNGAG00000023992	Pabpn1l	53	54.110	Nannospalax_galili
ENSHBUG00000002388	PABPN1L	90	100.000	ENSNBRG00000017078	PABPN1L	100	100.000	Neolamprologus_brichardi
ENSHBUG00000002388	PABPN1L	71	50.732	ENSOPRG00000005597	PABPN1L	75	48.309	Ochotona_princeps
ENSHBUG00000002388	PABPN1L	72	53.968	ENSOANG00000013901	PABPN1L	70	53.886	Ornithorhynchus_anatinus
ENSHBUG00000002388	PABPN1L	100	83.206	ENSORLG00000026560	PABPN1L	100	83.206	Oryzias_latipes
ENSHBUG00000002388	PABPN1L	100	82.824	ENSORLG00020015068	PABPN1L	100	82.824	Oryzias_latipes_hni
ENSHBUG00000002388	PABPN1L	100	83.206	ENSORLG00015000397	PABPN1L	100	83.206	Oryzias_latipes_hsok
ENSHBUG00000002388	PABPN1L	100	80.989	ENSOMEG00000017896	PABPN1L	72	79.848	Oryzias_melastigma
ENSHBUG00000002388	PABPN1L	57	51.235	ENSOARG00000013682	PABPN1L	51	54.140	Ovis_aries
ENSHBUG00000002388	PABPN1L	71	51.244	ENSPPAG00000028866	PABPN1L	72	49.000	Pan_paniscus
ENSHBUG00000002388	PABPN1L	63	51.765	ENSPPRG00000015106	PABPN1L	73	47.783	Panthera_pardus
ENSHBUG00000002388	PABPN1L	63	52.439	ENSPTIG00000015606	PABPN1L	63	51.829	Panthera_tigris_altaica
ENSHBUG00000002388	PABPN1L	71	51.244	ENSPTRG00000031120	PABPN1L	72	49.000	Pan_troglodytes
ENSHBUG00000002388	PABPN1L	71	51.232	ENSPANG00000026039	PABPN1L	72	49.246	Papio_anubis
ENSHBUG00000002388	PABPN1L	61	65.644	ENSPSIG00000003404	PABPN1L	82	61.963	Pelodiscus_sinensis
ENSHBUG00000002388	PABPN1L	81	87.324	ENSPMGG00000013927	PABPN1L	94	87.324	Periophthalmus_magnuspinnatus
ENSHBUG00000002388	PABPN1L	72	47.847	ENSPEMG00000016624	Pabpn1l	74	45.366	Peromyscus_maniculatus_bairdii
ENSHBUG00000002388	PABPN1L	50	61.940	ENSPCIG00000007038	-	91	61.940	Phascolarctos_cinereus
ENSHBUG00000002388	PABPN1L	100	88.593	ENSPFOG00000007001	PABPN1L	100	89.354	Poecilia_formosa
ENSHBUG00000002388	PABPN1L	100	88.593	ENSPLAG00000018431	PABPN1L	100	89.354	Poecilia_latipinna
ENSHBUG00000002388	PABPN1L	100	88.593	ENSPMEG00000009108	PABPN1L	100	89.354	Poecilia_mexicana
ENSHBUG00000002388	PABPN1L	73	83.333	ENSPMEG00000000169	-	92	83.333	Poecilia_mexicana
ENSHBUG00000002388	PABPN1L	82	91.667	ENSPREG00000022533	PABPN1L	92	91.549	Poecilia_reticulata
ENSHBUG00000002388	PABPN1L	73	52.551	ENSPPYG00000007655	PABPN1L	72	50.249	Pongo_abelii
ENSHBUG00000002388	PABPN1L	71	47.761	ENSPCOG00000024077	PABPN1L	54	56.667	Propithecus_coquereli
ENSHBUG00000002388	PABPN1L	71	49.500	ENSPVAG00000002716	PABPN1L	72	49.261	Pteropus_vampyrus
ENSHBUG00000002388	PABPN1L	100	99.618	ENSPNYG00000004803	PABPN1L	100	99.618	Pundamilia_nyererei
ENSHBUG00000002388	PABPN1L	72	47.739	ENSRNOG00000029558	Pabpn1l	54	58.621	Rattus_norvegicus
ENSHBUG00000002388	PABPN1L	71	51.232	ENSRBIG00000030740	PABPN1L	73	49.000	Rhinopithecus_bieti
ENSHBUG00000002388	PABPN1L	71	51.980	ENSRROG00000035483	-	73	50.000	Rhinopithecus_roxellana
ENSHBUG00000002388	PABPN1L	71	51.232	ENSRROG00000032240	-	73	49.000	Rhinopithecus_roxellana
ENSHBUG00000002388	PABPN1L	71	51.980	ENSSBOG00000018410	PABPN1L	72	51.759	Saimiri_boliviensis_boliviensis
ENSHBUG00000002388	PABPN1L	100	86.194	ENSSMAG00000021348	PABPN1L	100	88.060	Scophthalmus_maximus
ENSHBUG00000002388	PABPN1L	100	92.776	ENSSDUG00000006986	PABPN1L	100	92.015	Seriola_dumerili
ENSHBUG00000002388	PABPN1L	100	93.156	ENSSLDG00000021845	PABPN1L	100	92.395	Seriola_lalandi_dorsalis
ENSHBUG00000002388	PABPN1L	58	47.436	ENSSARG00000005178	-	50	57.759	Sorex_araneus
ENSHBUG00000002388	PABPN1L	100	93.916	ENSSPAG00000017978	PABPN1L	100	93.156	Stegastes_partitus
ENSHBUG00000002388	PABPN1L	78	42.254	ENSSSCG00000036367	PABPN1L	76	46.009	Sus_scrofa
ENSHBUG00000002388	PABPN1L	100	79.008	ENSTRUG00000024725	PABPN1L	100	79.008	Takifugu_rubripes
ENSHBUG00000002388	PABPN1L	73	91.667	ENSTNIG00000009416	PABPN1L	100	91.667	Tetraodon_nigroviridis
ENSHBUG00000002388	PABPN1L	65	48.864	ENSTTRG00000004691	PABPN1L	52	56.552	Tursiops_truncatus
ENSHBUG00000002388	PABPN1L	60	53.254	ENSXETG00000011258	pabpn1l	86	50.532	Xenopus_tropicalis
ENSHBUG00000002388	PABPN1L	79	91.787	ENSXCOG00000003254	PABPN1L	92	91.080	Xiphophorus_couchianus
ENSHBUG00000002388	PABPN1L	81	87.793	ENSXMAG00000029090	PABPN1L	94	87.793	Xiphophorus_maculatus