EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002397 (Gene tree)
Gene ID: 102307155
Gene Symbol: -
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4530 bases
Position: chrJH425558.1:373815-378344
Accession: 102307155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001209	MMR_HSR1	PF01926.23	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014173	-	639	XM_005937962	ENSHBUP00000001209	212 (aa)	XP_005938024	UPI000329D29B

Gene Model

Click here to download ENSHBUG00000002397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002397	-	76	51.553	ENSHBUG00000023035	rab11a	70	51.553
ENSHBUG00000002397	-	85	42.541	ENSHBUG00000006823	-	80	42.541
ENSHBUG00000002397	-	84	81.868	ENSHBUG00000010304	rab1ab	90	81.868
ENSHBUG00000002397	-	78	35.119	ENSHBUG00000017973	si:ch73-116o1.2	80	35.119
ENSHBUG00000002397	-	55	32.500	ENSHBUG00000012803	arl4aa	59	32.500
ENSHBUG00000002397	-	99	45.933	ENSHBUG00000000993	rab30	89	45.933
ENSHBUG00000002397	-	76	50.000	ENSHBUG00000001518	rab18a	79	50.000
ENSHBUG00000002397	-	83	44.886	ENSHBUG00000003752	rab5aa	81	44.886
ENSHBUG00000002397	-	84	36.111	ENSHBUG00000001462	RAB17	79	36.111
ENSHBUG00000002397	-	77	36.585	ENSHBUG00000011998	hrasb	86	36.585
ENSHBUG00000002397	-	81	37.143	ENSHBUG00000001595	rab9b	77	37.143
ENSHBUG00000002397	-	81	47.674	ENSHBUG00000009320	rab25b	84	47.590
ENSHBUG00000002397	-	72	30.247	ENSHBUG00000003805	-	74	30.247
ENSHBUG00000002397	-	79	51.190	ENSHBUG00000014777	rab11bb	77	51.190
ENSHBUG00000002397	-	74	33.962	ENSHBUG00000010964	rabl2	68	33.962
ENSHBUG00000002397	-	82	38.764	ENSHBUG00000009027	-	84	38.764
ENSHBUG00000002397	-	97	32.710	ENSHBUG00000013010	rab32b	92	32.710
ENSHBUG00000002397	-	84	56.180	ENSHBUG00000003728	-	89	56.180
ENSHBUG00000002397	-	76	65.432	ENSHBUG00000001416	rab35b	80	65.432
ENSHBUG00000002397	-	86	43.169	ENSHBUG00000006056	-	84	43.169
ENSHBUG00000002397	-	91	42.708	ENSHBUG00000022562	-	88	42.708
ENSHBUG00000002397	-	77	38.182	ENSHBUG00000013197	kras	91	37.572
ENSHBUG00000002397	-	87	36.216	ENSHBUG00000014338	RAB41	84	36.216
ENSHBUG00000002397	-	79	51.190	ENSHBUG00000009947	-	77	51.190
ENSHBUG00000002397	-	77	35.882	ENSHBUG00000012594	RAB29	82	35.882
ENSHBUG00000002397	-	80	49.112	ENSHBUG00000019164	rab2a	80	49.112
ENSHBUG00000002397	-	81	45.930	ENSHBUG00000008497	rab12	71	45.930
ENSHBUG00000002397	-	79	32.370	ENSHBUG00000011397	si:cabz01085950.1	85	32.370
ENSHBUG00000002397	-	58	32.000	ENSHBUG00000005802	arl4d	61	32.000
ENSHBUG00000002397	-	74	36.076	ENSHBUG00000007966	rab23	87	34.270
ENSHBUG00000002397	-	77	35.758	ENSHBUG00000018763	rras	83	34.756
ENSHBUG00000002397	-	96	36.408	ENSHBUG00000003434	rab22a	78	36.408
ENSHBUG00000002397	-	96	35.784	ENSHBUG00000000890	rab6a	94	35.784
ENSHBUG00000002397	-	78	39.053	ENSHBUG00000010852	RAB7A	82	39.053
ENSHBUG00000002397	-	75	39.506	ENSHBUG00000014023	si:dkey-13a21.4	78	39.506
ENSHBUG00000002397	-	81	43.353	ENSHBUG00000015126	rab42a	65	43.353
ENSHBUG00000002397	-	72	40.132	ENSHBUG00000003230	rab6bb	76	40.132
ENSHBUG00000002397	-	85	31.694	ENSHBUG00000007788	rheb	94	31.694
ENSHBUG00000002397	-	76	42.857	ENSHBUG00000013162	rab33ba	85	42.857
ENSHBUG00000002397	-	77	63.190	ENSHBUG00000019261	si:dkey-16l2.16	98	52.857
ENSHBUG00000002397	-	76	49.383	ENSHBUG00000003696	rab18b	79	49.383
ENSHBUG00000002397	-	81	45.714	ENSHBUG00000017620	-	83	45.714
ENSHBUG00000002397	-	87	36.757	ENSHBUG00000012905	rab6ba	85	36.757
ENSHBUG00000002397	-	68	44.371	ENSHBUG00000001714	-	63	44.371
ENSHBUG00000002397	-	80	46.961	ENSHBUG00000007827	zgc:101559	77	46.961
ENSHBUG00000002397	-	97	34.928	ENSHBUG00000009014	-	96	34.928
ENSHBUG00000002397	-	96	35.545	ENSHBUG00000016064	rab34a	77	35.545
ENSHBUG00000002397	-	50	38.679	ENSHBUG00000015310	RAP2B	89	38.983
ENSHBUG00000002397	-	80	49.704	ENSHBUG00000017297	rab15	79	49.704
ENSHBUG00000002397	-	73	37.736	ENSHBUG00000022669	rab9a	79	37.736
ENSHBUG00000002397	-	58	30.709	ENSHBUG00000013721	-	62	30.709
ENSHBUG00000002397	-	80	43.275	ENSHBUG00000003539	RAB39B	80	43.275
ENSHBUG00000002397	-	80	43.275	ENSHBUG00000013570	-	80	43.275
ENSHBUG00000002397	-	77	44.172	ENSHBUG00000002014	rab5c	80	42.778
ENSHBUG00000002397	-	98	42.105	ENSHBUG00000003876	rab25a	96	42.105
ENSHBUG00000002397	-	99	44.976	ENSHBUG00000009333	rab11al	96	44.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002397	-	100	94.393	ENSAPOG00000004980	-	100	94.393	Acanthochromis_polyacanthus
ENSHBUG00000002397	-	100	96.729	ENSACIG00000009006	zgc:171927	100	96.729	Amphilophus_citrinellus
ENSHBUG00000002397	-	100	92.056	ENSAOCG00000024149	-	100	92.056	Amphiprion_ocellaris
ENSHBUG00000002397	-	69	93.151	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSHBUG00000002397	-	100	92.523	ENSAPEG00000022171	zgc:171927	99	92.523	Amphiprion_percula
ENSHBUG00000002397	-	100	93.925	ENSATEG00000003430	zgc:171927	100	93.925	Anabas_testudineus
ENSHBUG00000002397	-	100	100.000	ENSACLG00000013734	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000002397	-	100	79.812	ENSAMXG00000039486	zgc:171927	100	79.812	Astyanax_mexicanus
ENSHBUG00000002397	-	100	90.187	ENSCSEG00000014416	zgc:171927	100	90.187	Cynoglossus_semilaevis
ENSHBUG00000002397	-	100	91.589	ENSCVAG00000009222	zgc:171927	100	91.589	Cyprinodon_variegatus
ENSHBUG00000002397	-	100	79.343	ENSDARG00000033056	zgc:171927	100	79.343	Danio_rerio
ENSHBUG00000002397	-	100	79.439	ENSELUG00000011680	zgc:171927	100	79.439	Esox_lucius
ENSHBUG00000002397	-	100	92.991	ENSFHEG00000022176	zgc:171927	100	92.991	Fundulus_heteroclitus
ENSHBUG00000002397	-	98	81.818	ENSGMOG00000004979	-	97	81.818	Gadus_morhua
ENSHBUG00000002397	-	98	92.823	ENSGAFG00000015702	zgc:171927	84	92.823	Gambusia_affinis
ENSHBUG00000002397	-	100	92.523	ENSGACG00000013401	zgc:171927	99	92.523	Gasterosteus_aculeatus
ENSHBUG00000002397	-	100	92.523	ENSKMAG00000009856	zgc:171927	100	92.523	Kryptolebias_marmoratus
ENSHBUG00000002397	-	100	91.121	ENSLBEG00000005791	-	100	91.121	Labrus_bergylta
ENSHBUG00000002397	-	98	90.431	ENSLBEG00000027226	-	89	90.431	Labrus_bergylta
ENSHBUG00000002397	-	98	73.077	ENSLOCG00000014692	zgc:171927	96	73.077	Lepisosteus_oculatus
ENSHBUG00000002397	-	100	92.991	ENSMAMG00000020135	zgc:171927	100	92.991	Mastacembelus_armatus
ENSHBUG00000002397	-	100	100.000	ENSMZEG00005024685	-	100	100.000	Maylandia_zebra
ENSHBUG00000002397	-	100	89.252	ENSMMOG00000009833	-	100	89.252	Mola_mola
ENSHBUG00000002397	-	100	91.981	ENSMALG00000021129	zgc:171927	100	91.981	Monopterus_albus
ENSHBUG00000002397	-	100	98.585	ENSNBRG00000006202	zgc:171927	100	98.585	Neolamprologus_brichardi
ENSHBUG00000002397	-	100	90.141	ENSORLG00000000602	zgc:171927	100	90.141	Oryzias_latipes
ENSHBUG00000002397	-	100	90.141	ENSORLG00020021071	zgc:171927	100	90.141	Oryzias_latipes_hni
ENSHBUG00000002397	-	100	90.141	ENSORLG00015010098	zgc:171927	100	90.141	Oryzias_latipes_hsok
ENSHBUG00000002397	-	100	90.654	ENSOMEG00000020594	zgc:171927	100	90.654	Oryzias_melastigma
ENSHBUG00000002397	-	100	92.991	ENSPFOG00000013810	zgc:171927	99	92.991	Poecilia_formosa
ENSHBUG00000002397	-	100	92.056	ENSPLAG00000005869	zgc:171927	100	92.056	Poecilia_latipinna
ENSHBUG00000002397	-	100	92.991	ENSPMEG00000022350	zgc:171927	100	92.991	Poecilia_mexicana
ENSHBUG00000002397	-	100	93.925	ENSPREG00000017517	zgc:171927	100	93.925	Poecilia_reticulata
ENSHBUG00000002397	-	100	99.057	ENSPNYG00000007520	-	100	99.057	Pundamilia_nyererei
ENSHBUG00000002397	-	100	79.812	ENSPNAG00000029574	zgc:171927	100	79.812	Pygocentrus_nattereri
ENSHBUG00000002397	-	100	77.934	ENSSFOG00015005464	zgc:171927	99	77.934	Scleropages_formosus
ENSHBUG00000002397	-	100	88.785	ENSSMAG00000004416	-	100	88.785	Scophthalmus_maximus
ENSHBUG00000002397	-	100	96.262	ENSSDUG00000004445	zgc:171927	100	96.262	Seriola_dumerili
ENSHBUG00000002397	-	100	96.262	ENSSLDG00000018024	zgc:171927	100	96.262	Seriola_lalandi_dorsalis
ENSHBUG00000002397	-	100	94.393	ENSSPAG00000013533	zgc:171927	100	94.393	Stegastes_partitus
ENSHBUG00000002397	-	100	93.925	ENSXCOG00000010695	zgc:171927	100	93.925	Xiphophorus_couchianus
ENSHBUG00000002397	-	100	94.393	ENSXMAG00000004683	zgc:171927	100	94.393	Xiphophorus_maculatus