EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002448 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 20450 bases
Position: chrJH425756.1:389500-409949
Accession: 102313125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022263	Anticodon_1	PF08264.13	7.1e-36	1	1
ENSHBUP00000022263	tRNA-synt_1	PF00133.22	7.5e-180	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000014120	-	3066	XM_014340939	ENSHBUP00000022263	1022 (aa)	XP_014196425	-

Gene Model

Click here to download ENSHBUG00000002448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002448	vars2	94	48.077	ENSHBUG00000017151	vars	76	47.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002448	vars2	100	76.274	ENSAPOG00000007396	vars2	99	76.460	Acanthochromis_polyacanthus
ENSHBUG00000002448	vars2	92	52.658	ENSAMEG00000012997	VARS2	87	52.658	Ailuropoda_melanoleuca
ENSHBUG00000002448	vars2	100	83.789	ENSACIG00000004344	vars2	99	83.789	Amphilophus_citrinellus
ENSHBUG00000002448	vars2	100	76.552	ENSAOCG00000000476	vars2	99	76.738	Amphiprion_ocellaris
ENSHBUG00000002448	vars2	100	76.182	ENSAPEG00000008646	vars2	97	76.367	Amphiprion_percula
ENSHBUG00000002448	vars2	95	82.270	ENSATEG00000012291	vars2	98	78.814	Anabas_testudineus
ENSHBUG00000002448	vars2	95	52.753	ENSACAG00000022093	VARS2	90	52.753	Anolis_carolinensis
ENSHBUG00000002448	vars2	95	50.963	ENSANAG00000038018	VARS2	90	50.963	Aotus_nancymaae
ENSHBUG00000002448	vars2	100	94.013	ENSACLG00000018673	vars2	99	94.013	Astatotilapia_calliptera
ENSHBUG00000002448	vars2	97	68.816	ENSAMXG00000017773	vars2	97	69.031	Astyanax_mexicanus
ENSHBUG00000002448	vars2	100	49.206	ENSBTAG00000010698	VARS2	98	49.206	Bos_taurus
ENSHBUG00000002448	vars2	95	50.810	ENSCJAG00000019826	VARS2	90	50.911	Callithrix_jacchus
ENSHBUG00000002448	vars2	96	51.312	ENSCAFG00000000454	VARS2	94	51.312	Canis_familiaris
ENSHBUG00000002448	vars2	86	54.360	ENSCAFG00020019387	VARS2	94	53.985	Canis_lupus_dingo
ENSHBUG00000002448	vars2	93	52.337	ENSCHIG00000007847	VARS2	90	52.280	Capra_hircus
ENSHBUG00000002448	vars2	99	49.443	ENSTSYG00000009904	VARS2	99	49.443	Carlito_syrichta
ENSHBUG00000002448	vars2	91	51.941	ENSCAPG00000017770	VARS2	99	51.941	Cavia_aperea
ENSHBUG00000002448	vars2	95	52.280	ENSCPOG00000021834	VARS2	90	52.381	Cavia_porcellus
ENSHBUG00000002448	vars2	95	50.706	ENSCCAG00000037907	VARS2	90	50.806	Cebus_capucinus
ENSHBUG00000002448	vars2	94	51.308	ENSCATG00000032554	VARS2	91	51.408	Cercocebus_atys
ENSHBUG00000002448	vars2	93	52.541	ENSCLAG00000002889	VARS2	91	52.541	Chinchilla_lanigera
ENSHBUG00000002448	vars2	94	51.610	ENSCSAG00000008327	VARS2	91	51.710	Chlorocebus_sabaeus
ENSHBUG00000002448	vars2	93	55.005	ENSCPBG00000021502	VARS2	86	63.975	Chrysemys_picta_bellii
ENSHBUG00000002448	vars2	94	51.107	ENSCANG00000014991	VARS2	90	51.207	Colobus_angolensis_palliatus
ENSHBUG00000002448	vars2	95	52.328	ENSCGRG00001021535	Vars2	90	52.328	Cricetulus_griseus_chok1gshd
ENSHBUG00000002448	vars2	95	52.328	ENSCGRG00000014112	Vars2	90	52.328	Cricetulus_griseus_crigri
ENSHBUG00000002448	vars2	88	74.497	ENSCSEG00000015432	vars2	98	74.497	Cynoglossus_semilaevis
ENSHBUG00000002448	vars2	69	77.019	ENSCVAG00000017765	vars2	99	77.019	Cyprinodon_variegatus
ENSHBUG00000002448	vars2	99	68.091	ENSDARG00000056717	vars2	98	68.091	Danio_rerio
ENSHBUG00000002448	vars2	83	49.655	ENSDORG00000008516	Vars2	93	49.655	Dipodomys_ordii
ENSHBUG00000002448	vars2	93	46.741	ENSETEG00000014844	VARS2	90	46.741	Echinops_telfairi
ENSHBUG00000002448	vars2	99	49.438	ENSEASG00005019997	VARS2	97	54.104	Equus_asinus_asinus
ENSHBUG00000002448	vars2	99	49.348	ENSECAG00000018202	VARS2	99	49.441	Equus_caballus
ENSHBUG00000002448	vars2	99	68.566	ENSELUG00000017824	vars2	99	68.566	Esox_lucius
ENSHBUG00000002448	vars2	92	52.090	ENSFCAG00000010531	VARS2	90	52.090	Felis_catus
ENSHBUG00000002448	vars2	95	51.368	ENSFDAG00000017216	VARS2	90	51.368	Fukomys_damarensis
ENSHBUG00000002448	vars2	95	70.565	ENSFHEG00000013932	vars2	99	70.565	Fundulus_heteroclitus
ENSHBUG00000002448	vars2	93	69.751	ENSGMOG00000018960	vars2	98	69.751	Gadus_morhua
ENSHBUG00000002448	vars2	93	73.333	ENSGAFG00000004737	vars2	100	73.333	Gambusia_affinis
ENSHBUG00000002448	vars2	95	76.673	ENSGACG00000001464	vars2	97	76.673	Gasterosteus_aculeatus
ENSHBUG00000002448	vars2	94	54.601	ENSGAGG00000011652	VARS2	97	54.601	Gopherus_agassizii
ENSHBUG00000002448	vars2	94	51.308	ENSGGOG00000014587	VARS2	91	51.408	Gorilla_gorilla
ENSHBUG00000002448	vars2	94	52.187	ENSHGLG00000012886	VARS2	86	52.289	Heterocephalus_glaber_female
ENSHBUG00000002448	vars2	100	49.252	ENSHGLG00100016535	VARS2	90	52.187	Heterocephalus_glaber_male
ENSHBUG00000002448	vars2	70	75.102	ENSHCOG00000017907	vars2	97	75.102	Hippocampus_comes
ENSHBUG00000002448	vars2	95	71.154	ENSIPUG00000015573	Vars2	99	67.377	Ictalurus_punctatus
ENSHBUG00000002448	vars2	95	50.607	ENSSTOG00000009924	VARS2	90	50.709	Ictidomys_tridecemlineatus
ENSHBUG00000002448	vars2	91	52.898	ENSJJAG00000011144	Vars2	87	53.003	Jaculus_jaculus
ENSHBUG00000002448	vars2	100	73.524	ENSKMAG00000001393	vars2	99	73.524	Kryptolebias_marmoratus
ENSHBUG00000002448	vars2	53	80.832	ENSLBEG00000005480	-	81	80.616	Labrus_bergylta
ENSHBUG00000002448	vars2	100	72.388	ENSLBEG00000011949	vars2	99	72.388	Labrus_bergylta
ENSHBUG00000002448	vars2	97	49.185	ENSLACG00000001576	-	98	49.665	Latimeria_chalumnae
ENSHBUG00000002448	vars2	95	51.469	ENSLAFG00000015183	VARS2	90	51.773	Loxodonta_africana
ENSHBUG00000002448	vars2	94	51.408	ENSMFAG00000042367	VARS2	91	51.509	Macaca_fascicularis
ENSHBUG00000002448	vars2	94	51.509	ENSMMUG00000018609	VARS2	91	51.610	Macaca_mulatta
ENSHBUG00000002448	vars2	94	51.509	ENSMNEG00000043163	VARS2	91	51.610	Macaca_nemestrina
ENSHBUG00000002448	vars2	94	51.408	ENSMLEG00000041728	VARS2	89	51.509	Mandrillus_leucophaeus
ENSHBUG00000002448	vars2	97	77.220	ENSMAMG00000020339	vars2	98	75.985	Mastacembelus_armatus
ENSHBUG00000002448	vars2	100	93.920	ENSMZEG00005017669	vars2	99	93.920	Maylandia_zebra
ENSHBUG00000002448	vars2	95	52.126	ENSMAUG00000018946	Vars2	90	52.126	Mesocricetus_auratus
ENSHBUG00000002448	vars2	77	57.550	ENSMICG00000005365	VARS2	89	57.550	Microcebus_murinus
ENSHBUG00000002448	vars2	87	59.671	ENSMOCG00000014607	Vars2	89	59.671	Microtus_ochrogaster
ENSHBUG00000002448	vars2	95	75.984	ENSMMOG00000012122	vars2	99	72.744	Mola_mola
ENSHBUG00000002448	vars2	91	51.426	ENSMODG00000015848	VARS2	89	50.505	Monodelphis_domestica
ENSHBUG00000002448	vars2	96	77.778	ENSMALG00000009217	vars2	98	77.286	Monopterus_albus
ENSHBUG00000002448	vars2	100	48.833	MGP_CAROLIEiJ_G0021529	Vars2	97	53.460	Mus_caroli
ENSHBUG00000002448	vars2	100	48.646	ENSMUSG00000038838	Vars2	96	53.565	Mus_musculus
ENSHBUG00000002448	vars2	99	49.254	MGP_PahariEiJ_G0020523	Vars2	96	53.913	Mus_pahari
ENSHBUG00000002448	vars2	100	48.926	MGP_SPRETEiJ_G0022436	Vars2	97	53.114	Mus_spretus
ENSHBUG00000002448	vars2	92	53.265	ENSMPUG00000011643	VARS2	90	53.265	Mustela_putorius_furo
ENSHBUG00000002448	vars2	91	53.390	ENSMLUG00000002356	VARS2	84	53.390	Myotis_lucifugus
ENSHBUG00000002448	vars2	96	48.744	ENSNGAG00000020607	Vars2	91	48.744	Nannospalax_galili
ENSHBUG00000002448	vars2	75	92.857	ENSNBRG00000001624	vars2	64	92.857	Neolamprologus_brichardi
ENSHBUG00000002448	vars2	94	50.506	ENSNLEG00000005625	VARS2	89	50.607	Nomascus_leucogenys
ENSHBUG00000002448	vars2	78	70.476	ENSMEUG00000014475	VARS2	83	70.476	Notamacropus_eugenii
ENSHBUG00000002448	vars2	85	61.654	ENSOPRG00000000682	VARS2	80	61.654	Ochotona_princeps
ENSHBUG00000002448	vars2	91	52.848	ENSODEG00000017965	VARS2	87	52.954	Octodon_degus
ENSHBUG00000002448	vars2	95	69.539	ENSONIG00000004734	vars2	98	69.539	Oreochromis_niloticus
ENSHBUG00000002448	vars2	74	43.355	ENSOANG00000000398	-	91	43.355	Ornithorhynchus_anatinus
ENSHBUG00000002448	vars2	95	48.397	ENSOCUG00000021496	VARS2	58	48.998	Oryctolagus_cuniculus
ENSHBUG00000002448	vars2	94	74.390	ENSORLG00000010632	vars2	99	70.138	Oryzias_latipes
ENSHBUG00000002448	vars2	94	74.695	ENSORLG00020018584	vars2	99	70.138	Oryzias_latipes_hni
ENSHBUG00000002448	vars2	94	74.593	ENSORLG00015010408	vars2	99	70.230	Oryzias_latipes_hsok
ENSHBUG00000002448	vars2	94	74.593	ENSOMEG00000008360	vars2	99	70.203	Oryzias_melastigma
ENSHBUG00000002448	vars2	93	51.564	ENSOGAG00000006087	VARS2	88	51.564	Otolemur_garnettii
ENSHBUG00000002448	vars2	93	51.675	ENSOARG00000010844	VARS2	89	51.619	Ovis_aries
ENSHBUG00000002448	vars2	94	51.509	ENSPPAG00000041141	VARS2	91	51.509	Pan_paniscus
ENSHBUG00000002448	vars2	92	51.886	ENSPPRG00000006751	VARS2	88	51.886	Panthera_pardus
ENSHBUG00000002448	vars2	92	51.939	ENSPTIG00000017799	VARS2	94	51.939	Panthera_tigris_altaica
ENSHBUG00000002448	vars2	94	51.509	ENSPTRG00000034497	VARS2	91	51.509	Pan_troglodytes
ENSHBUG00000002448	vars2	94	51.509	ENSPANG00000018481	VARS2	90	52.947	Papio_anubis
ENSHBUG00000002448	vars2	97	67.437	ENSPKIG00000011372	vars2	97	66.952	Paramormyrops_kingsleyae
ENSHBUG00000002448	vars2	60	62.520	ENSPSIG00000006206	VARS2	92	62.267	Pelodiscus_sinensis
ENSHBUG00000002448	vars2	99	71.866	ENSPMGG00000000465	vars2	99	71.866	Periophthalmus_magnuspinnatus
ENSHBUG00000002448	vars2	95	51.822	ENSPEMG00000014691	Vars2	90	51.822	Peromyscus_maniculatus_bairdii
ENSHBUG00000002448	vars2	93	52.152	ENSPCIG00000015040	VARS2	89	52.094	Phascolarctos_cinereus
ENSHBUG00000002448	vars2	95	74.245	ENSPFOG00000017616	vars2	97	71.673	Poecilia_formosa
ENSHBUG00000002448	vars2	100	71.895	ENSPLAG00000019778	vars2	99	71.895	Poecilia_latipinna
ENSHBUG00000002448	vars2	100	71.442	ENSPMEG00000011123	vars2	99	71.442	Poecilia_mexicana
ENSHBUG00000002448	vars2	97	64.519	ENSPREG00000014998	vars2	99	64.519	Poecilia_reticulata
ENSHBUG00000002448	vars2	94	51.207	ENSPPYG00000016424	VARS2	91	51.308	Pongo_abelii
ENSHBUG00000002448	vars2	60	60.000	ENSPCAG00000006946	VARS2	73	60.000	Procavia_capensis
ENSHBUG00000002448	vars2	94	51.165	ENSPCOG00000014839	VARS2	87	51.165	Propithecus_coquereli
ENSHBUG00000002448	vars2	95	51.509	ENSPVAG00000004197	VARS2	90	51.509	Pteropus_vampyrus
ENSHBUG00000002448	vars2	90	98.630	ENSPNYG00000010314	vars2	100	98.630	Pundamilia_nyererei
ENSHBUG00000002448	vars2	99	66.605	ENSPNAG00000026793	vars2	99	66.881	Pygocentrus_nattereri
ENSHBUG00000002448	vars2	100	48.926	ENSRNOG00000000833	Vars2	98	48.926	Rattus_norvegicus
ENSHBUG00000002448	vars2	94	51.509	ENSRBIG00000032725	VARS2	91	51.610	Rhinopithecus_bieti
ENSHBUG00000002448	vars2	94	51.308	ENSRROG00000043847	VARS2	91	51.408	Rhinopithecus_roxellana
ENSHBUG00000002448	vars2	94	50.098	ENSSBOG00000033240	VARS2	89	50.098	Saimiri_boliviensis_boliviensis
ENSHBUG00000002448	vars2	95	51.672	ENSSHAG00000009307	VARS2	90	51.773	Sarcophilus_harrisii
ENSHBUG00000002448	vars2	98	66.603	ENSSFOG00015016187	vars2	97	66.011	Scleropages_formosus
ENSHBUG00000002448	vars2	100	74.954	ENSSMAG00000020842	vars2	99	75.046	Scophthalmus_maximus
ENSHBUG00000002448	vars2	100	78.261	ENSSDUG00000011598	vars2	99	78.446	Seriola_dumerili
ENSHBUG00000002448	vars2	100	77.664	ENSSLDG00000015492	vars2	99	77.944	Seriola_lalandi_dorsalis
ENSHBUG00000002448	vars2	50	58.519	ENSSARG00000003786	-	59	58.519	Sorex_araneus
ENSHBUG00000002448	vars2	82	59.382	ENSSPUG00000014700	VARS2	87	59.382	Sphenodon_punctatus
ENSHBUG00000002448	vars2	100	75.141	ENSSPAG00000004654	vars2	99	75.141	Stegastes_partitus
ENSHBUG00000002448	vars2	94	52.348	ENSSSCG00000001384	VARS2	92	52.348	Sus_scrofa
ENSHBUG00000002448	vars2	95	72.480	ENSTRUG00000005264	vars2	99	69.311	Takifugu_rubripes
ENSHBUG00000002448	vars2	97	68.906	ENSTNIG00000005916	vars2	97	68.709	Tetraodon_nigroviridis
ENSHBUG00000002448	vars2	91	45.024	ENSTTRG00000012243	VARS2	91	45.024	Tursiops_truncatus
ENSHBUG00000002448	vars2	100	49.208	ENSUAMG00000026124	VARS2	99	51.856	Ursus_americanus
ENSHBUG00000002448	vars2	94	52.236	ENSUMAG00000019894	VARS2	90	52.236	Ursus_maritimus
ENSHBUG00000002448	vars2	99	49.860	ENSVVUG00000010754	VARS2	93	49.860	Vulpes_vulpes
ENSHBUG00000002448	vars2	84	54.097	ENSXETG00000003036	vars2	91	54.097	Xenopus_tropicalis
ENSHBUG00000002448	vars2	97	72.467	ENSXCOG00000003455	vars2	99	72.467	Xiphophorus_couchianus
ENSHBUG00000002448	vars2	100	72.862	ENSXMAG00000013523	vars2	99	72.862	Xiphophorus_maculatus