EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002494 (Gene tree)
Gene ID: 102294388
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6329 bases
Position: chrJH425519.1:1099544-1105872
Accession: 102294388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001316	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013998	RNPS1-201	2567	XM_005936198	ENSHBUP00000001316	278 (aa)	XP_005936260	UPI0003BCB6D0

Gene Model

Click here to download ENSHBUG00000002494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002494	RNPS1	82	63.319	ENSHBUG00000017337	-	82	66.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002494	RNPS1	82	66.667	ENSAPOG00000014649	-	83	71.429	Acanthochromis_polyacanthus
ENSHBUG00000002494	RNPS1	82	88.646	ENSAPOG00000017310	RNPS1	74	88.596	Acanthochromis_polyacanthus
ENSHBUG00000002494	RNPS1	77	88.732	ENSACIG00000014367	-	77	78.873	Amphilophus_citrinellus
ENSHBUG00000002494	RNPS1	82	77.922	ENSAOCG00000002404	RNPS1	83	84.416	Amphiprion_ocellaris
ENSHBUG00000002494	RNPS1	82	77.826	ENSAPEG00000006497	RNPS1	80	84.348	Amphiprion_percula
ENSHBUG00000002494	RNPS1	82	80.952	ENSATEG00000024267	RNPS1	83	82.684	Anabas_testudineus
ENSHBUG00000002494	RNPS1	77	63.084	ENSATEG00000000835	RNPS1	89	68.246	Anabas_testudineus
ENSHBUG00000002494	RNPS1	100	99.640	ENSACLG00000025942	RNPS1	100	99.640	Astatotilapia_calliptera
ENSHBUG00000002494	RNPS1	82	63.319	ENSACLG00000021537	-	86	66.087	Astatotilapia_calliptera
ENSHBUG00000002494	RNPS1	82	77.155	ENSAMXG00000006330	-	82	70.259	Astyanax_mexicanus
ENSHBUG00000002494	RNPS1	93	62.879	ENSCATG00000042361	-	80	63.180	Cercocebus_atys
ENSHBUG00000002494	RNPS1	97	71.377	ENSCSAG00000005219	-	81	66.250	Chlorocebus_sabaeus
ENSHBUG00000002494	RNPS1	82	70.000	ENSCSEG00000000402	RNPS1	76	70.996	Cynoglossus_semilaevis
ENSHBUG00000002494	RNPS1	82	73.043	ENSCSEG00000015997	RNPS1	80	75.652	Cynoglossus_semilaevis
ENSHBUG00000002494	RNPS1	77	77.209	ENSCVAG00000010868	RNPS1	77	78.140	Cyprinodon_variegatus
ENSHBUG00000002494	RNPS1	82	70.513	ENSDARG00000116743	rnps1	83	73.077	Danio_rerio
ENSHBUG00000002494	RNPS1	82	70.513	ENSDARG00000100188	RNPS1	83	73.077	Danio_rerio
ENSHBUG00000002494	RNPS1	69	51.269	ENSDNOG00000038751	-	99	51.256	Dasypus_novemcinctus
ENSHBUG00000002494	RNPS1	75	73.206	ENSELUG00000015003	RNPS1	77	71.495	Esox_lucius
ENSHBUG00000002494	RNPS1	77	79.630	ENSFHEG00000011705	RNPS1	77	81.019	Fundulus_heteroclitus
ENSHBUG00000002494	RNPS1	77	76.744	ENSGAFG00000005457	RNPS1	77	79.535	Gambusia_affinis
ENSHBUG00000002494	RNPS1	82	75.431	ENSGACG00000011261	RNPS1	83	78.017	Gasterosteus_aculeatus
ENSHBUG00000002494	RNPS1	82	66.667	ENSGACG00000005641	-	82	67.532	Gasterosteus_aculeatus
ENSHBUG00000002494	RNPS1	91	67.050	ENSHGLG00100015267	-	86	63.333	Heterocephalus_glaber_male
ENSHBUG00000002494	RNPS1	84	67.797	ENSJJAG00000019234	-	68	67.797	Jaculus_jaculus
ENSHBUG00000002494	RNPS1	82	77.391	ENSKMAG00000009135	RNPS1	82	83.043	Kryptolebias_marmoratus
ENSHBUG00000002494	RNPS1	75	73.206	ENSLBEG00000024091	RNPS1	77	73.709	Labrus_bergylta
ENSHBUG00000002494	RNPS1	84	65.000	ENSMFAG00000044121	-	83	62.500	Macaca_fascicularis
ENSHBUG00000002494	RNPS1	86	67.347	ENSMMUG00000041726	-	84	64.435	Macaca_mulatta
ENSHBUG00000002494	RNPS1	86	66.939	ENSMNEG00000024827	-	84	64.017	Macaca_nemestrina
ENSHBUG00000002494	RNPS1	75	64.186	ENSMLEG00000040232	-	83	60.748	Mandrillus_leucophaeus
ENSHBUG00000002494	RNPS1	82	76.957	ENSMAMG00000021148	-	81	70.870	Mastacembelus_armatus
ENSHBUG00000002494	RNPS1	82	80.519	ENSMAMG00000021609	-	83	82.251	Mastacembelus_armatus
ENSHBUG00000002494	RNPS1	100	99.640	ENSMZEG00005012742	RNPS1	100	99.640	Maylandia_zebra
ENSHBUG00000002494	RNPS1	82	63.478	ENSMZEG00005006256	-	83	66.234	Maylandia_zebra
ENSHBUG00000002494	RNPS1	76	72.986	ENSMMOG00000010863	RNPS1	77	73.239	Mola_mola
ENSHBUG00000002494	RNPS1	82	63.478	ENSNBRG00000014540	-	85	66.234	Neolamprologus_brichardi
ENSHBUG00000002494	RNPS1	99	97.834	ENSNBRG00000023437	RNPS1	100	97.834	Neolamprologus_brichardi
ENSHBUG00000002494	RNPS1	60	52.695	ENSODEG00000002513	-	52	47.899	Octodon_degus
ENSHBUG00000002494	RNPS1	82	61.572	ENSONIG00000019627	-	83	66.234	Oreochromis_niloticus
ENSHBUG00000002494	RNPS1	82	75.109	ENSORLG00000008033	RNPS1	94	76.471	Oryzias_latipes
ENSHBUG00000002494	RNPS1	82	75.000	ENSORLG00020020207	RNPS1	82	73.246	Oryzias_latipes_hni
ENSHBUG00000002494	RNPS1	82	75.439	ENSORLG00015000305	-	82	73.684	Oryzias_latipes_hsok
ENSHBUG00000002494	RNPS1	59	63.804	ENSPTIG00000015643	RNPS1	62	77.119	Panthera_tigris_altaica
ENSHBUG00000002494	RNPS1	73	49.275	ENSPANG00000033576	-	77	46.602	Papio_anubis
ENSHBUG00000002494	RNPS1	82	71.915	ENSPKIG00000023465	RNPS1	83	67.234	Paramormyrops_kingsleyae
ENSHBUG00000002494	RNPS1	59	65.031	ENSPCIG00000016114	-	58	75.424	Phascolarctos_cinereus
ENSHBUG00000002494	RNPS1	77	77.674	ENSPFOG00000009978	RNPS1	77	80.465	Poecilia_formosa
ENSHBUG00000002494	RNPS1	77	77.674	ENSPLAG00000009343	RNPS1	77	80.465	Poecilia_latipinna
ENSHBUG00000002494	RNPS1	77	77.674	ENSPMEG00000008552	RNPS1	77	80.465	Poecilia_mexicana
ENSHBUG00000002494	RNPS1	77	77.674	ENSPREG00000001843	RNPS1	77	80.465	Poecilia_reticulata
ENSHBUG00000002494	RNPS1	100	99.640	ENSPNYG00000000585	RNPS1	100	99.640	Pundamilia_nyererei
ENSHBUG00000002494	RNPS1	82	77.155	ENSPNAG00000025479	RNPS1	82	71.983	Pygocentrus_nattereri
ENSHBUG00000002494	RNPS1	82	72.340	ENSSFOG00015022746	RNPS1	85	71.489	Scleropages_formosus
ENSHBUG00000002494	RNPS1	82	73.276	ENSSFOG00015019341	-	78	65.888	Scleropages_formosus
ENSHBUG00000002494	RNPS1	82	83.843	ENSSMAG00000016933	RNPS1	82	83.843	Scophthalmus_maximus
ENSHBUG00000002494	RNPS1	82	79.221	ENSSDUG00000011453	RNPS1	83	80.952	Seriola_dumerili
ENSHBUG00000002494	RNPS1	80	90.090	ENSSLDG00000021341	RNPS1	81	90.090	Seriola_lalandi_dorsalis
ENSHBUG00000002494	RNPS1	82	79.654	ENSSPAG00000009383	RNPS1	83	86.580	Stegastes_partitus
ENSHBUG00000002494	RNPS1	82	75.107	ENSTRUG00000008602	RNPS1	83	77.253	Takifugu_rubripes
ENSHBUG00000002494	RNPS1	82	75.431	ENSTNIG00000009753	RNPS1	81	77.586	Tetraodon_nigroviridis
ENSHBUG00000002494	RNPS1	82	74.783	ENSXMAG00000004827	RNPS1	82	77.391	Xiphophorus_maculatus