EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002510 (Gene tree)
Gene ID: 102311035
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 11115 bases
Position: chrJH425756.1:314109-325223
Accession: 102311035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001320	RRM_1	PF00076.22	2.1e-24	1	2
ENSHBUP00000001320	RRM_1	PF00076.22	2.1e-24	2	2
ENSHBUP00000022299	RRM_1	PF00076.22	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013985	-	2147	XM_005944976	ENSHBUP00000001320	308 (aa)	XP_005945038	UPI0003BCAE82
ENSHBUT00000013992	-	744	-	ENSHBUP00000022299	247 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000002510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002510	trnau1apa	98	46.732	ENSHBUG00000018944	trnau1apb	97	46.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002510	trnau1apa	98	59.406	ENSG00000180098	TRNAU1AP	98	58.033	Homo_sapiens
ENSHBUG00000002510	trnau1apa	100	85.987	ENSAPOG00000007148	TRNAU1AP	100	85.987	Acanthochromis_polyacanthus
ENSHBUG00000002510	trnau1apa	98	59.736	ENSAMEG00000011367	TRNAU1AP	98	58.361	Ailuropoda_melanoleuca
ENSHBUG00000002510	trnau1apa	100	91.290	ENSACIG00000004161	trnau1apa	100	91.290	Amphilophus_citrinellus
ENSHBUG00000002510	trnau1apa	100	88.141	ENSAOCG00000008056	trnau1apa	100	88.141	Amphiprion_ocellaris
ENSHBUG00000002510	trnau1apa	100	88.141	ENSAPEG00000008868	trnau1apa	100	88.141	Amphiprion_percula
ENSHBUG00000002510	trnau1apa	95	93.571	ENSATEG00000012140	trnau1apa	100	93.571	Anabas_testudineus
ENSHBUG00000002510	trnau1apa	91	70.455	ENSAPLG00000002606	TRNAU1AP	98	59.516	Anas_platyrhynchos
ENSHBUG00000002510	trnau1apa	94	50.333	ENSACAG00000003995	-	98	50.331	Anolis_carolinensis
ENSHBUG00000002510	trnau1apa	73	38.667	ENSACAG00000004205	-	80	38.667	Anolis_carolinensis
ENSHBUG00000002510	trnau1apa	98	59.406	ENSANAG00000018976	TRNAU1AP	98	58.033	Aotus_nancymaae
ENSHBUG00000002510	trnau1apa	100	98.052	ENSACLG00000018515	trnau1apa	100	98.052	Astatotilapia_calliptera
ENSHBUG00000002510	trnau1apa	99	54.662	ENSAMXG00000013750	trnau1apa	97	53.698	Astyanax_mexicanus
ENSHBUG00000002510	trnau1apa	94	69.892	ENSAMXG00000029240	-	97	69.892	Astyanax_mexicanus
ENSHBUG00000002510	trnau1apa	98	59.076	ENSBTAG00000010393	TRNAU1AP	98	57.705	Bos_taurus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCJAG00000009717	TRNAU1AP	87	69.863	Callithrix_jacchus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCAFG00000011735	TRNAU1AP	98	58.033	Canis_familiaris
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCAFG00020023584	TRNAU1AP	98	58.033	Canis_lupus_dingo
ENSHBUG00000002510	trnau1apa	99	58.824	ENSCHIG00000023215	TRNAU1AP	99	57.468	Capra_hircus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSTSYG00000003506	TRNAU1AP	87	69.863	Carlito_syrichta
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCPOG00000001925	TRNAU1AP	98	58.033	Cavia_porcellus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCCAG00000037506	TRNAU1AP	87	69.863	Cebus_capucinus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCATG00000044617	TRNAU1AP	87	69.863	Cercocebus_atys
ENSHBUG00000002510	trnau1apa	98	58.824	ENSCLAG00000008223	TRNAU1AP	98	58.497	Chinchilla_lanigera
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCSAG00000001014	TRNAU1AP	98	58.497	Chlorocebus_sabaeus
ENSHBUG00000002510	trnau1apa	94	56.949	ENSCPBG00000000121	TRNAU1AP	99	59.322	Chrysemys_picta_bellii
ENSHBUG00000002510	trnau1apa	53	47.879	ENSCSAVG00000011781	-	84	47.879	Ciona_savignyi
ENSHBUG00000002510	trnau1apa	98	50.654	ENSCANG00000041949	TRNAU1AP	98	52.604	Colobus_angolensis_palliatus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCGRG00001004713	Trnau1ap	98	58.033	Cricetulus_griseus_chok1gshd
ENSHBUG00000002510	trnau1apa	98	59.406	ENSCGRG00000014532	Trnau1ap	98	58.033	Cricetulus_griseus_crigri
ENSHBUG00000002510	trnau1apa	100	74.448	ENSCSEG00000006663	trnau1apa	100	90.370	Cynoglossus_semilaevis
ENSHBUG00000002510	trnau1apa	99	93.333	ENSCVAG00000018069	trnau1apa	99	93.333	Cyprinodon_variegatus
ENSHBUG00000002510	trnau1apa	99	51.125	ENSDARG00000101323	trnau1apa	95	49.057	Danio_rerio
ENSHBUG00000002510	trnau1apa	98	59.406	ENSDNOG00000033009	TRNAU1AP	98	58.033	Dasypus_novemcinctus
ENSHBUG00000002510	trnau1apa	58	58.659	ENSDNOG00000047959	-	96	55.789	Dasypus_novemcinctus
ENSHBUG00000002510	trnau1apa	98	55.960	ENSDORG00000006349	Trnau1ap	97	71.852	Dipodomys_ordii
ENSHBUG00000002510	trnau1apa	94	35.258	FBgn0031607	CG15440	50	47.093	Drosophila_melanogaster
ENSHBUG00000002510	trnau1apa	82	56.202	ENSETEG00000012594	TRNAU1AP	98	55.253	Echinops_telfairi
ENSHBUG00000002510	trnau1apa	62	46.237	ENSEBUG00000006349	-	63	46.237	Eptatretus_burgeri
ENSHBUG00000002510	trnau1apa	98	59.406	ENSEASG00005010062	TRNAU1AP	90	69.863	Equus_asinus_asinus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSECAG00000012980	TRNAU1AP	90	69.863	Equus_caballus
ENSHBUG00000002510	trnau1apa	100	72.756	ENSELUG00000017686	trnau1apa	100	74.760	Esox_lucius
ENSHBUG00000002510	trnau1apa	94	77.419	ENSELUG00000022790	-	95	77.419	Esox_lucius
ENSHBUG00000002510	trnau1apa	98	59.406	ENSFCAG00000013401	TRNAU1AP	98	58.033	Felis_catus
ENSHBUG00000002510	trnau1apa	94	56.610	ENSFALG00000001371	TRNAU1AP	99	57.627	Ficedula_albicollis
ENSHBUG00000002510	trnau1apa	99	58.576	ENSFDAG00000018599	TRNAU1AP	99	57.792	Fukomys_damarensis
ENSHBUG00000002510	trnau1apa	79	86.992	ENSFHEG00000018232	trnau1apa	85	87.549	Fundulus_heteroclitus
ENSHBUG00000002510	trnau1apa	100	63.694	ENSGMOG00000016508	trnau1apa	99	65.287	Gadus_morhua
ENSHBUG00000002510	trnau1apa	98	57.756	ENSGALG00000001310	-	98	59.076	Gallus_gallus
ENSHBUG00000002510	trnau1apa	68	38.356	ENSGALG00000012721	C2H6orf52	79	38.667	Gallus_gallus
ENSHBUG00000002510	trnau1apa	80	86.400	ENSGAFG00000004928	trnau1apa	92	94.074	Gambusia_affinis
ENSHBUG00000002510	trnau1apa	100	85.484	ENSGACG00000001443	trnau1apa	100	85.484	Gasterosteus_aculeatus
ENSHBUG00000002510	trnau1apa	94	56.949	ENSGAGG00000004940	TRNAU1AP	99	59.322	Gopherus_agassizii
ENSHBUG00000002510	trnau1apa	98	59.406	ENSGGOG00000003511	TRNAU1AP	87	69.863	Gorilla_gorilla
ENSHBUG00000002510	trnau1apa	98	58.824	ENSHGLG00000010380	TRNAU1AP	98	58.033	Heterocephalus_glaber_female
ENSHBUG00000002510	trnau1apa	98	56.863	ENSHGLG00100012699	TRNAU1AP	98	56.066	Heterocephalus_glaber_male
ENSHBUG00000002510	trnau1apa	99	85.714	ENSHCOG00000014770	trnau1apa	99	72.168	Hippocampus_comes
ENSHBUG00000002510	trnau1apa	98	59.406	ENSSTOG00000000079	TRNAU1AP	98	58.033	Ictidomys_tridecemlineatus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSJJAG00000010128	Trnau1ap	98	58.170	Jaculus_jaculus
ENSHBUG00000002510	trnau1apa	100	81.150	ENSKMAG00000001230	trnau1apa	100	94.815	Kryptolebias_marmoratus
ENSHBUG00000002510	trnau1apa	100	82.540	ENSLBEG00000011683	trnau1apa	100	92.143	Labrus_bergylta
ENSHBUG00000002510	trnau1apa	98	50.495	ENSLACG00000005541	TRNAU1AP	99	50.495	Latimeria_chalumnae
ENSHBUG00000002510	trnau1apa	98	59.211	ENSLOCG00000004041	trnau1apa	99	70.588	Lepisosteus_oculatus
ENSHBUG00000002510	trnau1apa	98	59.736	ENSLAFG00000007628	TRNAU1AP	98	58.361	Loxodonta_africana
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMFAG00000043751	TRNAU1AP	87	69.863	Macaca_fascicularis
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMMUG00000006561	TRNAU1AP	98	58.497	Macaca_mulatta
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMNEG00000044201	TRNAU1AP	87	69.863	Macaca_nemestrina
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMLEG00000015649	TRNAU1AP	87	69.863	Mandrillus_leucophaeus
ENSHBUG00000002510	trnau1apa	99	82.965	ENSMAMG00000001247	trnau1apa	100	82.650	Mastacembelus_armatus
ENSHBUG00000002510	trnau1apa	100	98.052	ENSMZEG00005017722	trnau1apa	100	98.052	Maylandia_zebra
ENSHBUG00000002510	trnau1apa	96	59.122	ENSMGAG00000002105	TRNAU1AP	99	58.446	Meleagris_gallopavo
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMICG00000008386	TRNAU1AP	87	69.863	Microcebus_murinus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMOCG00000011189	Trnau1ap	98	58.033	Microtus_ochrogaster
ENSHBUG00000002510	trnau1apa	100	69.427	ENSMMOG00000012107	trnau1apa	99	69.427	Mola_mola
ENSHBUG00000002510	trnau1apa	98	58.170	ENSMODG00000010927	TRNAU1AP	98	57.843	Monodelphis_domestica
ENSHBUG00000002510	trnau1apa	94	97.778	ENSMALG00000016778	trnau1apa	100	97.778	Monopterus_albus
ENSHBUG00000002510	trnau1apa	98	59.406	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	65.823	Mus_caroli
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMUSG00000028898	Trnau1ap	92	65.823	Mus_musculus
ENSHBUG00000002510	trnau1apa	98	59.406	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSHBUG00000002510	trnau1apa	98	59.406	MGP_SPRETEiJ_G0027544	Trnau1ap	92	65.823	Mus_spretus
ENSHBUG00000002510	trnau1apa	99	59.477	ENSMPUG00000015511	TRNAU1AP	99	58.117	Mustela_putorius_furo
ENSHBUG00000002510	trnau1apa	98	59.406	ENSMLUG00000012586	TRNAU1AP	98	58.033	Myotis_lucifugus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSNGAG00000015881	Trnau1ap	98	58.497	Nannospalax_galili
ENSHBUG00000002510	trnau1apa	100	81.672	ENSNBRG00000001758	trnau1apa	99	81.672	Neolamprologus_brichardi
ENSHBUG00000002510	trnau1apa	98	59.406	ENSNLEG00000009822	TRNAU1AP	87	69.863	Nomascus_leucogenys
ENSHBUG00000002510	trnau1apa	96	58.108	ENSMEUG00000006117	TRNAU1AP	99	57.047	Notamacropus_eugenii
ENSHBUG00000002510	trnau1apa	71	64.368	ENSOPRG00000007084	-	58	64.368	Ochotona_princeps
ENSHBUG00000002510	trnau1apa	98	59.406	ENSODEG00000002970	TRNAU1AP	98	58.033	Octodon_degus
ENSHBUG00000002510	trnau1apa	81	97.200	ENSONIG00000004715	trnau1apa	97	97.200	Oreochromis_niloticus
ENSHBUG00000002510	trnau1apa	98	45.574	ENSOANG00000005325	-	79	68.056	Ornithorhynchus_anatinus
ENSHBUG00000002510	trnau1apa	87	47.761	ENSOCUG00000006834	-	97	46.038	Oryctolagus_cuniculus
ENSHBUG00000002510	trnau1apa	98	49.175	ENSOCUG00000002353	-	98	49.175	Oryctolagus_cuniculus
ENSHBUG00000002510	trnau1apa	98	57.516	ENSOCUG00000011704	-	98	56.721	Oryctolagus_cuniculus
ENSHBUG00000002510	trnau1apa	100	81.410	ENSORLG00000010428	trnau1apa	100	93.333	Oryzias_latipes
ENSHBUG00000002510	trnau1apa	100	81.410	ENSORLG00020000926	trnau1ap	100	93.333	Oryzias_latipes_hni
ENSHBUG00000002510	trnau1apa	100	81.410	ENSORLG00015009858	trnau1ap	100	93.333	Oryzias_latipes_hsok
ENSHBUG00000002510	trnau1apa	100	81.090	ENSOMEG00000007873	trnau1apa	100	94.074	Oryzias_melastigma
ENSHBUG00000002510	trnau1apa	98	59.406	ENSOGAG00000002274	TRNAU1AP	98	58.033	Otolemur_garnettii
ENSHBUG00000002510	trnau1apa	99	58.824	ENSOARG00000002843	TRNAU1AP	99	57.468	Ovis_aries
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPPAG00000033927	TRNAU1AP	87	69.863	Pan_paniscus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPPRG00000004416	TRNAU1AP	98	58.033	Panthera_pardus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPTIG00000016677	TRNAU1AP	98	58.033	Panthera_tigris_altaica
ENSHBUG00000002510	trnau1apa	91	51.786	ENSPTRG00000000434	-	94	50.347	Pan_troglodytes
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPANG00000016019	TRNAU1AP	87	69.863	Papio_anubis
ENSHBUG00000002510	trnau1apa	94	59.794	ENSPKIG00000015511	trnau1apa	93	59.794	Paramormyrops_kingsleyae
ENSHBUG00000002510	trnau1apa	93	77.419	ENSPKIG00000022205	-	95	77.419	Paramormyrops_kingsleyae
ENSHBUG00000002510	trnau1apa	94	59.322	ENSPSIG00000006864	TRNAU1AP	99	59.322	Pelodiscus_sinensis
ENSHBUG00000002510	trnau1apa	97	69.205	ENSPMGG00000023893	trnau1apa	96	67.667	Periophthalmus_magnuspinnatus
ENSHBUG00000002510	trnau1apa	98	59.076	ENSPEMG00000007877	Trnau1ap	98	57.705	Peromyscus_maniculatus_bairdii
ENSHBUG00000002510	trnau1apa	56	52.809	ENSPMAG00000000592	trnau1apa	95	52.809	Petromyzon_marinus
ENSHBUG00000002510	trnau1apa	75	49.784	ENSPMAG00000005934	trnau1apa	96	48.485	Petromyzon_marinus
ENSHBUG00000002510	trnau1apa	93	94.074	ENSPFOG00000008100	trnau1apa	99	94.074	Poecilia_formosa
ENSHBUG00000002510	trnau1apa	88	93.496	ENSPLAG00000010236	trnau1apa	99	93.496	Poecilia_latipinna
ENSHBUG00000002510	trnau1apa	93	89.552	ENSPMEG00000016387	trnau1apa	97	89.552	Poecilia_mexicana
ENSHBUG00000002510	trnau1apa	89	80.000	ENSPREG00000019821	trnau1apa	95	82.105	Poecilia_reticulata
ENSHBUG00000002510	trnau1apa	78	72.381	ENSPPYG00000001639	-	95	56.109	Pongo_abelii
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPCOG00000027712	-	98	58.033	Propithecus_coquereli
ENSHBUG00000002510	trnau1apa	96	55.466	ENSPCOG00000023470	-	99	55.870	Propithecus_coquereli
ENSHBUG00000002510	trnau1apa	98	59.406	ENSPVAG00000017214	TRNAU1AP	98	58.033	Pteropus_vampyrus
ENSHBUG00000002510	trnau1apa	100	99.675	ENSPNYG00000010130	trnau1apa	100	99.675	Pundamilia_nyererei
ENSHBUG00000002510	trnau1apa	99	53.226	ENSPNAG00000024905	trnau1apa	97	53.226	Pygocentrus_nattereri
ENSHBUG00000002510	trnau1apa	82	59.684	ENSRNOG00000055344	Trnau1ap	81	58.039	Rattus_norvegicus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSRBIG00000029083	TRNAU1AP	87	69.863	Rhinopithecus_bieti
ENSHBUG00000002510	trnau1apa	98	59.406	ENSRROG00000029128	TRNAU1AP	87	69.863	Rhinopithecus_roxellana
ENSHBUG00000002510	trnau1apa	98	59.406	ENSSBOG00000021299	TRNAU1AP	87	69.863	Saimiri_boliviensis_boliviensis
ENSHBUG00000002510	trnau1apa	98	58.170	ENSSHAG00000008108	TRNAU1AP	98	57.843	Sarcophilus_harrisii
ENSHBUG00000002510	trnau1apa	94	93.333	ENSSMAG00000020851	trnau1apa	100	93.333	Scophthalmus_maximus
ENSHBUG00000002510	trnau1apa	100	82.334	ENSSDUG00000011734	trnau1apa	100	82.334	Seriola_dumerili
ENSHBUG00000002510	trnau1apa	100	76.448	ENSSLDG00000012101	trnau1apa	100	78.295	Seriola_lalandi_dorsalis
ENSHBUG00000002510	trnau1apa	96	59.459	ENSSARG00000007536	TRNAU1AP	99	58.528	Sorex_araneus
ENSHBUG00000002510	trnau1apa	98	56.436	ENSSPUG00000010400	-	99	55.446	Sphenodon_punctatus
ENSHBUG00000002510	trnau1apa	62	53.684	ENSSPUG00000010415	-	99	51.295	Sphenodon_punctatus
ENSHBUG00000002510	trnau1apa	94	97.037	ENSSPAG00000005029	trnau1apa	100	97.037	Stegastes_partitus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSSSCG00000030284	TRNAU1AP	98	58.033	Sus_scrofa
ENSHBUG00000002510	trnau1apa	68	41.346	ENSTGUG00000005908	-	99	40.476	Taeniopygia_guttata
ENSHBUG00000002510	trnau1apa	96	58.108	ENSTGUG00000000735	-	99	58.528	Taeniopygia_guttata
ENSHBUG00000002510	trnau1apa	100	81.731	ENSTRUG00000003352	trnau1apa	100	95.556	Takifugu_rubripes
ENSHBUG00000002510	trnau1apa	94	91.852	ENSTNIG00000006129	trnau1apa	100	76.115	Tetraodon_nigroviridis
ENSHBUG00000002510	trnau1apa	73	61.957	ENSTBEG00000008049	-	98	52.918	Tupaia_belangeri
ENSHBUG00000002510	trnau1apa	98	59.406	ENSTTRG00000001854	TRNAU1AP	98	58.033	Tursiops_truncatus
ENSHBUG00000002510	trnau1apa	94	59.247	ENSUAMG00000008789	TRNAU1AP	99	58.305	Ursus_americanus
ENSHBUG00000002510	trnau1apa	98	59.406	ENSUMAG00000011068	TRNAU1AP	98	60.066	Ursus_maritimus
ENSHBUG00000002510	trnau1apa	98	52.769	ENSVPAG00000006778	TRNAU1AP	99	51.961	Vicugna_pacos
ENSHBUG00000002510	trnau1apa	98	58.609	ENSVVUG00000012518	TRNAU1AP	80	71.852	Vulpes_vulpes
ENSHBUG00000002510	trnau1apa	93	94.074	ENSXMAG00000017361	trnau1apa	99	94.074	Xiphophorus_maculatus