EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000002559 (Gene tree)
Gene ID: 102302439
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3815 bases
Position: chrJH425416.1:1870817-1874631
Accession: 102302439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022347	RNA_pol_I_A49	PF06870.12	4.9e-115	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013894	-	1263	XM_005928328	ENSHBUP00000022347	420 (aa)	XP_005928390	UPI0003BD04B5

Gene Model

Click here to download ENSHBUG00000002559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002559	polr1e	99	45.000	ENSG00000137054	POLR1E	99	45.000	Homo_sapiens
ENSHBUG00000002559	polr1e	99	73.077	ENSAPOG00000012452	polr1e	100	73.077	Acanthochromis_polyacanthus
ENSHBUG00000002559	polr1e	99	40.169	ENSAMEG00000010193	POLR1E	97	40.169	Ailuropoda_melanoleuca
ENSHBUG00000002559	polr1e	94	83.715	ENSACIG00000009884	polr1e	99	83.715	Amphilophus_citrinellus
ENSHBUG00000002559	polr1e	99	80.048	ENSAOCG00000005665	polr1e	100	80.048	Amphiprion_ocellaris
ENSHBUG00000002559	polr1e	99	80.529	ENSAPEG00000020581	polr1e	100	80.529	Amphiprion_percula
ENSHBUG00000002559	polr1e	99	77.885	ENSATEG00000020609	polr1e	100	77.885	Anabas_testudineus
ENSHBUG00000002559	polr1e	80	40.260	ENSAPLG00000010340	POLR1E	100	39.231	Anas_platyrhynchos
ENSHBUG00000002559	polr1e	99	44.656	ENSANAG00000038046	POLR1E	99	44.656	Aotus_nancymaae
ENSHBUG00000002559	polr1e	100	99.286	ENSACLG00000013685	polr1e	100	99.286	Astatotilapia_calliptera
ENSHBUG00000002559	polr1e	99	57.108	ENSAMXG00000018181	polr1e	99	57.108	Astyanax_mexicanus
ENSHBUG00000002559	polr1e	99	44.418	ENSBTAG00000012243	POLR1E	99	44.418	Bos_taurus
ENSHBUG00000002559	polr1e	93	43.108	ENSCJAG00000010512	POLR1E	94	45.910	Callithrix_jacchus
ENSHBUG00000002559	polr1e	99	43.765	ENSCAFG00000002377	POLR1E	99	43.765	Canis_familiaris
ENSHBUG00000002559	polr1e	99	43.529	ENSCAFG00020017851	POLR1E	99	43.529	Canis_lupus_dingo
ENSHBUG00000002559	polr1e	98	45.169	ENSCHIG00000019479	POLR1E	98	45.169	Capra_hircus
ENSHBUG00000002559	polr1e	99	45.176	ENSTSYG00000002075	POLR1E	99	45.176	Carlito_syrichta
ENSHBUG00000002559	polr1e	69	43.098	ENSCAPG00000015653	POLR1E	99	43.098	Cavia_aperea
ENSHBUG00000002559	polr1e	99	45.199	ENSCPOG00000009965	POLR1E	100	45.199	Cavia_porcellus
ENSHBUG00000002559	polr1e	99	40.476	ENSCCAG00000029460	POLR1E	99	40.476	Cebus_capucinus
ENSHBUG00000002559	polr1e	99	45.000	ENSCATG00000031732	POLR1E	99	46.154	Cercocebus_atys
ENSHBUG00000002559	polr1e	87	46.721	ENSCLAG00000012701	POLR1E	96	46.721	Chinchilla_lanigera
ENSHBUG00000002559	polr1e	99	45.000	ENSCSAG00000010782	POLR1E	99	45.000	Chlorocebus_sabaeus
ENSHBUG00000002559	polr1e	94	37.688	ENSCHOG00000013024	POLR1E	83	37.688	Choloepus_hoffmanni
ENSHBUG00000002559	polr1e	99	46.635	ENSCPBG00000006923	POLR1E	99	46.635	Chrysemys_picta_bellii
ENSHBUG00000002559	polr1e	99	45.476	ENSCANG00000036112	POLR1E	99	47.863	Colobus_angolensis_palliatus
ENSHBUG00000002559	polr1e	100	42.891	ENSCGRG00001006197	Polr1e	97	42.891	Cricetulus_griseus_chok1gshd
ENSHBUG00000002559	polr1e	100	42.654	ENSCGRG00000006430	Polr1e	97	42.654	Cricetulus_griseus_crigri
ENSHBUG00000002559	polr1e	99	68.675	ENSCSEG00000005121	polr1e	99	68.675	Cynoglossus_semilaevis
ENSHBUG00000002559	polr1e	99	76.683	ENSCVAG00000019759	polr1e	100	76.683	Cyprinodon_variegatus
ENSHBUG00000002559	polr1e	96	58.025	ENSDARG00000006434	polr1e	100	58.034	Danio_rerio
ENSHBUG00000002559	polr1e	99	40.632	ENSDNOG00000010257	POLR1E	99	38.316	Dasypus_novemcinctus
ENSHBUG00000002559	polr1e	84	42.061	ENSETEG00000018204	POLR1E	99	42.340	Echinops_telfairi
ENSHBUG00000002559	polr1e	99	44.418	ENSEASG00005000675	POLR1E	99	44.418	Equus_asinus_asinus
ENSHBUG00000002559	polr1e	99	44.418	ENSECAG00000014669	POLR1E	99	44.418	Equus_caballus
ENSHBUG00000002559	polr1e	99	38.942	ENSEEUG00000011928	POLR1E	86	38.942	Erinaceus_europaeus
ENSHBUG00000002559	polr1e	99	66.348	ENSELUG00000008150	polr1e	99	66.348	Esox_lucius
ENSHBUG00000002559	polr1e	99	43.943	ENSFCAG00000013081	POLR1E	99	43.943	Felis_catus
ENSHBUG00000002559	polr1e	94	45.137	ENSFALG00000012950	POLR1E	99	45.137	Ficedula_albicollis
ENSHBUG00000002559	polr1e	99	46.512	ENSFDAG00000016917	POLR1E	100	46.512	Fukomys_damarensis
ENSHBUG00000002559	polr1e	99	75.300	ENSFHEG00000009801	polr1e	100	75.300	Fundulus_heteroclitus
ENSHBUG00000002559	polr1e	98	54.762	ENSGMOG00000003336	POLR1E	99	54.762	Gadus_morhua
ENSHBUG00000002559	polr1e	99	45.606	ENSGALG00000005395	POLR1E	99	45.606	Gallus_gallus
ENSHBUG00000002559	polr1e	99	72.837	ENSGAFG00000004850	polr1e	100	72.837	Gambusia_affinis
ENSHBUG00000002559	polr1e	99	70.167	ENSGACG00000016087	polr1e	100	70.167	Gasterosteus_aculeatus
ENSHBUG00000002559	polr1e	96	43.032	ENSGAGG00000001659	POLR1E	99	42.721	Gopherus_agassizii
ENSHBUG00000002559	polr1e	99	45.238	ENSGGOG00000001882	POLR1E	99	45.238	Gorilla_gorilla
ENSHBUG00000002559	polr1e	99	45.433	ENSHGLG00000002036	POLR1E	100	45.433	Heterocephalus_glaber_female
ENSHBUG00000002559	polr1e	99	45.667	ENSHGLG00100012784	POLR1E	100	45.667	Heterocephalus_glaber_male
ENSHBUG00000002559	polr1e	99	70.913	ENSHCOG00000002774	polr1e	100	70.913	Hippocampus_comes
ENSHBUG00000002559	polr1e	99	56.250	ENSIPUG00000003019	polr1e	99	56.250	Ictalurus_punctatus
ENSHBUG00000002559	polr1e	99	44.019	ENSSTOG00000009810	POLR1E	99	44.019	Ictidomys_tridecemlineatus
ENSHBUG00000002559	polr1e	97	44.769	ENSJJAG00000020731	Polr1e	94	44.769	Jaculus_jaculus
ENSHBUG00000002559	polr1e	99	76.683	ENSKMAG00000000046	polr1e	100	76.683	Kryptolebias_marmoratus
ENSHBUG00000002559	polr1e	99	77.327	ENSLBEG00000003104	polr1e	99	77.327	Labrus_bergylta
ENSHBUG00000002559	polr1e	85	51.099	ENSLACG00000003416	POLR1E	99	51.099	Latimeria_chalumnae
ENSHBUG00000002559	polr1e	99	54.869	ENSLOCG00000012859	polr1e	99	54.869	Lepisosteus_oculatus
ENSHBUG00000002559	polr1e	99	44.836	ENSLAFG00000012831	POLR1E	99	44.836	Loxodonta_africana
ENSHBUG00000002559	polr1e	99	45.000	ENSMFAG00000045465	POLR1E	99	43.609	Macaca_fascicularis
ENSHBUG00000002559	polr1e	99	45.000	ENSMMUG00000017892	POLR1E	99	45.000	Macaca_mulatta
ENSHBUG00000002559	polr1e	99	41.395	ENSMNEG00000040283	POLR1E	99	41.395	Macaca_nemestrina
ENSHBUG00000002559	polr1e	99	45.000	ENSMLEG00000031135	POLR1E	99	45.000	Mandrillus_leucophaeus
ENSHBUG00000002559	polr1e	99	76.372	ENSMAMG00000001260	polr1e	99	76.372	Mastacembelus_armatus
ENSHBUG00000002559	polr1e	100	98.810	ENSMZEG00005021536	polr1e	100	98.810	Maylandia_zebra
ENSHBUG00000002559	polr1e	99	43.468	ENSMAUG00000021044	Polr1e	96	43.468	Mesocricetus_auratus
ENSHBUG00000002559	polr1e	99	45.176	ENSMICG00000003673	POLR1E	99	45.176	Microcebus_murinus
ENSHBUG00000002559	polr1e	100	42.891	ENSMOCG00000012920	Polr1e	97	42.891	Microtus_ochrogaster
ENSHBUG00000002559	polr1e	99	74.820	ENSMMOG00000007391	polr1e	100	74.820	Mola_mola
ENSHBUG00000002559	polr1e	90	47.354	ENSMODG00000002884	POLR1E	92	47.354	Monodelphis_domestica
ENSHBUG00000002559	polr1e	100	76.667	ENSMALG00000002665	polr1e	100	76.667	Monopterus_albus
ENSHBUG00000002559	polr1e	98	42.271	MGP_CAROLIEiJ_G0025967	Polr1e	98	42.211	Mus_caroli
ENSHBUG00000002559	polr1e	98	43.301	ENSMUSG00000028318	Polr1e	97	43.284	Mus_musculus
ENSHBUG00000002559	polr1e	98	43.855	MGP_PahariEiJ_G0024114	Polr1e	98	43.860	Mus_pahari
ENSHBUG00000002559	polr1e	98	43.780	MGP_SPRETEiJ_G0026930	Polr1e	98	43.781	Mus_spretus
ENSHBUG00000002559	polr1e	99	39.368	ENSMPUG00000006040	POLR1E	99	37.474	Mustela_putorius_furo
ENSHBUG00000002559	polr1e	99	44.656	ENSMLUG00000012688	POLR1E	96	44.656	Myotis_lucifugus
ENSHBUG00000002559	polr1e	97	45.255	ENSNGAG00000002520	Polr1e	94	45.255	Nannospalax_galili
ENSHBUG00000002559	polr1e	100	99.286	ENSNBRG00000016822	polr1e	100	99.286	Neolamprologus_brichardi
ENSHBUG00000002559	polr1e	99	45.238	ENSNLEG00000003616	POLR1E	99	45.238	Nomascus_leucogenys
ENSHBUG00000002559	polr1e	73	50.222	ENSMEUG00000015372	-	80	50.222	Notamacropus_eugenii
ENSHBUG00000002559	polr1e	85	39.011	ENSOPRG00000014206	POLR1E	99	39.011	Ochotona_princeps
ENSHBUG00000002559	polr1e	97	46.569	ENSODEG00000014565	POLR1E	94	46.569	Octodon_degus
ENSHBUG00000002559	polr1e	100	98.810	ENSONIG00000008921	polr1e	100	98.810	Oreochromis_niloticus
ENSHBUG00000002559	polr1e	99	43.529	ENSOCUG00000024773	POLR1E	99	43.765	Oryctolagus_cuniculus
ENSHBUG00000002559	polr1e	99	73.798	ENSORLG00000005143	polr1e	100	73.798	Oryzias_latipes
ENSHBUG00000002559	polr1e	92	72.021	ENSORLG00020007271	polr1e	99	72.021	Oryzias_latipes_hni
ENSHBUG00000002559	polr1e	99	73.798	ENSORLG00015000137	polr1e	100	73.798	Oryzias_latipes_hsok
ENSHBUG00000002559	polr1e	99	71.599	ENSOMEG00000013264	polr1e	99	71.599	Oryzias_melastigma
ENSHBUG00000002559	polr1e	99	43.705	ENSOGAG00000012981	POLR1E	97	43.705	Otolemur_garnettii
ENSHBUG00000002559	polr1e	98	45.411	ENSOARG00000011465	POLR1E	95	45.411	Ovis_aries
ENSHBUG00000002559	polr1e	99	45.000	ENSPPAG00000034566	POLR1E	99	45.000	Pan_paniscus
ENSHBUG00000002559	polr1e	99	44.762	ENSPPRG00000005649	POLR1E	99	44.762	Panthera_pardus
ENSHBUG00000002559	polr1e	99	44.762	ENSPTIG00000009774	POLR1E	99	44.762	Panthera_tigris_altaica
ENSHBUG00000002559	polr1e	99	45.000	ENSPTRG00000020944	POLR1E	99	45.000	Pan_troglodytes
ENSHBUG00000002559	polr1e	99	45.000	ENSPANG00000025563	POLR1E	99	45.000	Papio_anubis
ENSHBUG00000002559	polr1e	99	58.195	ENSPKIG00000003562	polr1e	99	58.195	Paramormyrops_kingsleyae
ENSHBUG00000002559	polr1e	97	44.254	ENSPSIG00000003274	POLR1E	95	44.988	Pelodiscus_sinensis
ENSHBUG00000002559	polr1e	94	66.667	ENSPMGG00000024169	polr1e	96	66.667	Periophthalmus_magnuspinnatus
ENSHBUG00000002559	polr1e	99	37.470	ENSPEMG00000022300	-	96	37.470	Peromyscus_maniculatus_bairdii
ENSHBUG00000002559	polr1e	99	43.943	ENSPEMG00000019151	-	96	43.943	Peromyscus_maniculatus_bairdii
ENSHBUG00000002559	polr1e	98	47.002	ENSPCIG00000014798	POLR1E	99	47.002	Phascolarctos_cinereus
ENSHBUG00000002559	polr1e	99	69.820	ENSPFOG00000019627	polr1e	99	69.820	Poecilia_formosa
ENSHBUG00000002559	polr1e	99	73.798	ENSPLAG00000022679	polr1e	100	73.798	Poecilia_latipinna
ENSHBUG00000002559	polr1e	86	75.000	ENSPMEG00000022123	polr1e	93	75.000	Poecilia_mexicana
ENSHBUG00000002559	polr1e	99	72.837	ENSPREG00000009470	polr1e	100	72.837	Poecilia_reticulata
ENSHBUG00000002559	polr1e	99	45.000	ENSPPYG00000019061	POLR1E	99	45.000	Pongo_abelii
ENSHBUG00000002559	polr1e	52	39.013	ENSPCAG00000004891	POLR1E	72	39.013	Procavia_capensis
ENSHBUG00000002559	polr1e	99	45.176	ENSPCOG00000027448	POLR1E	99	45.476	Propithecus_coquereli
ENSHBUG00000002559	polr1e	95	43.641	ENSPVAG00000007940	POLR1E	84	43.890	Pteropus_vampyrus
ENSHBUG00000002559	polr1e	100	99.286	ENSPNYG00000001032	polr1e	100	99.286	Pundamilia_nyererei
ENSHBUG00000002559	polr1e	99	57.452	ENSPNAG00000006987	polr1e	99	57.452	Pygocentrus_nattereri
ENSHBUG00000002559	polr1e	99	42.959	ENSRNOG00000012664	Polr1e	95	43.237	Rattus_norvegicus
ENSHBUG00000002559	polr1e	98	45.060	ENSRBIG00000034214	POLR1E	99	46.579	Rhinopithecus_bieti
ENSHBUG00000002559	polr1e	99	45.000	ENSRROG00000031986	POLR1E	99	45.000	Rhinopithecus_roxellana
ENSHBUG00000002559	polr1e	96	44.878	ENSSBOG00000021415	POLR1E	97	44.878	Saimiri_boliviensis_boliviensis
ENSHBUG00000002559	polr1e	82	47.701	ENSSHAG00000016084	POLR1E	95	47.714	Sarcophilus_harrisii
ENSHBUG00000002559	polr1e	99	60.432	ENSSFOG00015002293	polr1e	99	60.432	Scleropages_formosus
ENSHBUG00000002559	polr1e	99	77.327	ENSSMAG00000011672	polr1e	94	77.327	Scophthalmus_maximus
ENSHBUG00000002559	polr1e	100	78.571	ENSSDUG00000022279	polr1e	100	78.571	Seriola_dumerili
ENSHBUG00000002559	polr1e	100	77.857	ENSSLDG00000024918	polr1e	100	77.857	Seriola_lalandi_dorsalis
ENSHBUG00000002559	polr1e	55	40.948	ENSSARG00000009810	-	58	40.948	Sorex_araneus
ENSHBUG00000002559	polr1e	99	43.675	ENSSPUG00000009499	POLR1E	100	43.675	Sphenodon_punctatus
ENSHBUG00000002559	polr1e	99	80.288	ENSSPAG00000021240	polr1e	100	80.288	Stegastes_partitus
ENSHBUG00000002559	polr1e	99	43.529	ENSSSCG00000005347	POLR1E	99	43.529	Sus_scrofa
ENSHBUG00000002559	polr1e	94	38.789	ENSTGUG00000007169	POLR1E	100	38.789	Taeniopygia_guttata
ENSHBUG00000002559	polr1e	99	70.813	ENSTRUG00000020779	polr1e	99	70.813	Takifugu_rubripes
ENSHBUG00000002559	polr1e	99	71.394	ENSTNIG00000017812	polr1e	99	71.394	Tetraodon_nigroviridis
ENSHBUG00000002559	polr1e	94	45.340	ENSTBEG00000013786	POLR1E	84	45.250	Tupaia_belangeri
ENSHBUG00000002559	polr1e	98	43.541	ENSTTRG00000008294	POLR1E	87	43.541	Tursiops_truncatus
ENSHBUG00000002559	polr1e	99	44.681	ENSUAMG00000012474	POLR1E	100	47.027	Ursus_americanus
ENSHBUG00000002559	polr1e	99	44.681	ENSUMAG00000011496	POLR1E	99	44.681	Ursus_maritimus
ENSHBUG00000002559	polr1e	81	41.983	ENSVPAG00000009048	POLR1E	81	41.983	Vicugna_pacos
ENSHBUG00000002559	polr1e	99	43.294	ENSVVUG00000019954	POLR1E	99	43.294	Vulpes_vulpes
ENSHBUG00000002559	polr1e	99	42.381	ENSXETG00000006533	polr1e	99	42.381	Xenopus_tropicalis
ENSHBUG00000002559	polr1e	99	69.952	ENSXCOG00000013706	polr1e	100	69.952	Xiphophorus_couchianus
ENSHBUG00000002559	polr1e	99	74.760	ENSXMAG00000012484	polr1e	100	74.760	Xiphophorus_maculatus