EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000002669 (Gene tree)
Gene ID: 102298927
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 27223 bases
Position: chrJH425357.1:1411566-1438788
Accession: 102298927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001492	zf-C2H2_jaz	PF12171.8	5.4e-06	1	1
ENSHBUP00000001494	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSHBUP00000001497	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSHBUP00000001506	zf-C2H2_jaz	PF12171.8	5.8e-06	1	1
ENSHBUP00000001506	G-patch	PF01585.23	9.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013698	-	4395	XM_014333019	ENSHBUP00000001492	1412 (aa)	XP_014188505	UPI0003BCFF09
ENSHBUT00000013685	-	4674	XM_005920307	ENSHBUP00000001497	1428 (aa)	XP_005920369	UPI0003BD0033
ENSHBUT00000013693	-	4657	-	ENSHBUP00000001494	1428 (aa)	-	UPI0003BD0033
ENSHBUT00000013676	-	4764	XM_005920306	ENSHBUP00000001506	1491 (aa)	XP_005920368	UPI0003BD0CC3

Gene Model

Click here to download ENSHBUG00000002669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002669	gpatch8	100	89.178	ENSAPOG00000023938	gpatch8	100	89.178	Acanthochromis_polyacanthus
ENSHBUG00000002669	gpatch8	100	92.518	ENSACIG00000012241	gpatch8	100	92.919	Amphilophus_citrinellus
ENSHBUG00000002669	gpatch8	100	89.045	ENSAOCG00000018102	gpatch8	100	88.844	Amphiprion_ocellaris
ENSHBUG00000002669	gpatch8	100	89.112	ENSAPEG00000016776	gpatch8	100	88.911	Amphiprion_percula
ENSHBUG00000002669	gpatch8	100	84.836	ENSATEG00000003247	gpatch8	100	83.968	Anabas_testudineus
ENSHBUG00000002669	gpatch8	100	99.195	ENSACLG00000004165	gpatch8	100	99.195	Astatotilapia_calliptera
ENSHBUG00000002669	gpatch8	59	60.246	ENSAMXG00000041683	gpatch8	57	62.459	Astyanax_mexicanus
ENSHBUG00000002669	gpatch8	100	80.426	ENSCSEG00000021277	gpatch8	100	80.080	Cynoglossus_semilaevis
ENSHBUG00000002669	gpatch8	100	82.278	ENSCVAG00000013477	gpatch8	100	82.079	Cyprinodon_variegatus
ENSHBUG00000002669	gpatch8	100	64.146	ENSDARG00000059768	gpatch8	56	62.153	Danio_rerio
ENSHBUG00000002669	gpatch8	100	64.884	ENSELUG00000019920	gpatch8	57	64.416	Esox_lucius
ENSHBUG00000002669	gpatch8	56	73.421	ENSFHEG00000005791	gpatch8	100	80.493	Fundulus_heteroclitus
ENSHBUG00000002669	gpatch8	57	61.372	ENSGALG00000041556	GPATCH8	57	63.566	Gallus_gallus
ENSHBUG00000002669	gpatch8	100	82.255	ENSGAFG00000018138	gpatch8	100	81.855	Gambusia_affinis
ENSHBUG00000002669	gpatch8	73	58.027	ENSHGLG00100010738	GPATCH8	61	61.157	Heterocephalus_glaber_male
ENSHBUG00000002669	gpatch8	100	72.957	ENSHCOG00000017518	gpatch8	100	72.595	Hippocampus_comes
ENSHBUG00000002669	gpatch8	59	61.926	ENSIPUG00000015431	gpatch8	55	63.079	Ictalurus_punctatus
ENSHBUG00000002669	gpatch8	100	83.067	ENSKMAG00000018364	gpatch8	100	81.533	Kryptolebias_marmoratus
ENSHBUG00000002669	gpatch8	100	82.811	ENSLBEG00000023352	gpatch8	100	82.745	Labrus_bergylta
ENSHBUG00000002669	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	72	75.887	Lepisosteus_oculatus
ENSHBUG00000002669	gpatch8	100	86.469	ENSMAMG00000001618	gpatch8	100	86.187	Mastacembelus_armatus
ENSHBUG00000002669	gpatch8	100	99.128	ENSMZEG00005022584	gpatch8	100	99.128	Maylandia_zebra
ENSHBUG00000002669	gpatch8	61	81.216	ENSMMOG00000020472	gpatch8	100	81.167	Mola_mola
ENSHBUG00000002669	gpatch8	100	84.790	ENSMALG00000004204	gpatch8	100	82.455	Monopterus_albus
ENSHBUG00000002669	gpatch8	50	62.428	ENSMLUG00000013840	GPATCH8	52	63.314	Myotis_lucifugus
ENSHBUG00000002669	gpatch8	100	98.929	ENSNBRG00000016402	gpatch8	100	98.929	Neolamprologus_brichardi
ENSHBUG00000002669	gpatch8	97	97.891	ENSONIG00000001292	gpatch8	100	97.891	Oreochromis_niloticus
ENSHBUG00000002669	gpatch8	56	74.911	ENSORLG00000028497	gpatch8	100	79.244	Oryzias_latipes
ENSHBUG00000002669	gpatch8	61	76.268	ENSORLG00020006656	gpatch8	100	79.230	Oryzias_latipes_hni
ENSHBUG00000002669	gpatch8	56	75.030	ENSORLG00015019797	gpatch8	100	79.628	Oryzias_latipes_hsok
ENSHBUG00000002669	gpatch8	56	74.078	ENSOMEG00000023809	gpatch8	100	80.093	Oryzias_melastigma
ENSHBUG00000002669	gpatch8	61	53.625	ENSPKIG00000018753	gpatch8	56	54.152	Paramormyrops_kingsleyae
ENSHBUG00000002669	gpatch8	56	56.014	ENSPKIG00000004860	GPATCH8	54	55.347	Paramormyrops_kingsleyae
ENSHBUG00000002669	gpatch8	100	77.336	ENSPMGG00000000730	gpatch8	99	77.020	Periophthalmus_magnuspinnatus
ENSHBUG00000002669	gpatch8	100	82.121	ENSPFOG00000014833	gpatch8	100	82.121	Poecilia_formosa
ENSHBUG00000002669	gpatch8	100	82.121	ENSPLAG00000001035	gpatch8	100	82.121	Poecilia_latipinna
ENSHBUG00000002669	gpatch8	100	82.388	ENSPMEG00000024032	gpatch8	100	82.055	Poecilia_mexicana
ENSHBUG00000002669	gpatch8	100	82.322	ENSPREG00000008911	gpatch8	100	81.855	Poecilia_reticulata
ENSHBUG00000002669	gpatch8	100	99.262	ENSPNYG00000009426	gpatch8	100	99.262	Pundamilia_nyererei
ENSHBUG00000002669	gpatch8	59	60.981	ENSPNAG00000016200	gpatch8	58	63.564	Pygocentrus_nattereri
ENSHBUG00000002669	gpatch8	55	56.323	ENSSFOG00015021377	-	55	56.410	Scleropages_formosus
ENSHBUG00000002669	gpatch8	56	56.978	ENSSFOG00015004299	GPATCH8	55	57.901	Scleropages_formosus
ENSHBUG00000002669	gpatch8	100	87.112	ENSSDUG00000018065	gpatch8	100	86.837	Seriola_dumerili
ENSHBUG00000002669	gpatch8	100	88.106	ENSSLDG00000009225	gpatch8	100	87.907	Seriola_lalandi_dorsalis
ENSHBUG00000002669	gpatch8	100	89.379	ENSSPAG00000011368	gpatch8	100	89.112	Stegastes_partitus
ENSHBUG00000002669	gpatch8	100	78.590	ENSTRUG00000020474	gpatch8	100	78.059	Takifugu_rubripes
ENSHBUG00000002669	gpatch8	62	61.232	ENSTBEG00000009486	GPATCH8	56	64.591	Tupaia_belangeri
ENSHBUG00000002669	gpatch8	56	69.492	ENSXETG00000008843	gpatch8	58	64.777	Xenopus_tropicalis
ENSHBUG00000002669	gpatch8	100	81.770	ENSXCOG00000016680	gpatch8	100	81.304	Xiphophorus_couchianus
ENSHBUG00000002669	gpatch8	100	81.957	ENSXMAG00000009217	gpatch8	100	81.558	Xiphophorus_maculatus