EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000002714 (Gene tree)
Gene ID: 102293334
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 21784 bases
Position: chrJH425340.1:1108831-1130614
Accession: 102293334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001547	Exo_endo_phos	PF03372.23	5.1e-06	1	1
ENSHBUP00000001536	Exo_endo_phos	PF03372.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013624	-	1506	XM_005917479	ENSHBUP00000001536	361 (aa)	XP_005917541	UPI0003BCE300
ENSHBUT00000013614	-	2167	-	ENSHBUP00000022460	361 (aa)	-	-
ENSHBUT00000013602	-	1583	-	ENSHBUP00000001547	361 (aa)	-	-
ENSHBUT00000013617	-	2167	-	ENSHBUP00000022451	361 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000002714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000002714	tdp2b	57	81.159	ENSHBUG00000005421	-	87	81.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002714	tdp2b	95	54.467	ENSG00000111802	TDP2	91	56.475	Homo_sapiens
ENSHBUG00000002714	tdp2b	71	66.409	ENSAPOG00000018379	-	91	66.409	Acanthochromis_polyacanthus
ENSHBUG00000002714	tdp2b	73	57.895	ENSAMEG00000010230	TDP2	94	57.895	Ailuropoda_melanoleuca
ENSHBUG00000002714	tdp2b	73	65.399	ENSAPEG00000004208	-	94	65.399	Amphiprion_percula
ENSHBUG00000002714	tdp2b	84	60.841	ENSATEG00000010663	-	99	60.841	Anabas_testudineus
ENSHBUG00000002714	tdp2b	94	51.873	ENSACAG00000002332	TDP2	92	52.125	Anolis_carolinensis
ENSHBUG00000002714	tdp2b	95	56.196	ENSANAG00000020033	TDP2	96	54.696	Aotus_nancymaae
ENSHBUG00000002714	tdp2b	80	79.239	ENSACLG00000016132	tdp2b	96	79.239	Astatotilapia_calliptera
ENSHBUG00000002714	tdp2b	74	80.827	ENSACLG00000016148	tdp2b	95	80.827	Astatotilapia_calliptera
ENSHBUG00000002714	tdp2b	82	78.114	ENSACLG00000016174	tdp2b	99	78.114	Astatotilapia_calliptera
ENSHBUG00000002714	tdp2b	98	65.079	ENSAMXG00000011775	tdp2b	99	65.079	Astyanax_mexicanus
ENSHBUG00000002714	tdp2b	71	49.814	ENSAMXG00000036549	tdp2a	87	49.814	Astyanax_mexicanus
ENSHBUG00000002714	tdp2b	95	54.958	ENSBTAG00000000365	TDP2	93	54.958	Bos_taurus
ENSHBUG00000002714	tdp2b	99	54.795	ENSCJAG00000006074	TDP2	96	54.795	Callithrix_jacchus
ENSHBUG00000002714	tdp2b	99	54.247	ENSCJAG00000021963	-	96	54.247	Callithrix_jacchus
ENSHBUG00000002714	tdp2b	95	54.810	ENSCAFG00000010428	TDP2	98	54.810	Canis_familiaris
ENSHBUG00000002714	tdp2b	74	57.678	ENSCAFG00020009994	TDP2	91	57.678	Canis_lupus_dingo
ENSHBUG00000002714	tdp2b	73	57.678	ENSCHIG00000015294	-	90	57.678	Capra_hircus
ENSHBUG00000002714	tdp2b	86	52.885	ENSTSYG00000037199	TDP2	99	52.885	Carlito_syrichta
ENSHBUG00000002714	tdp2b	95	52.528	ENSCPOG00000006390	TDP2	94	53.073	Cavia_porcellus
ENSHBUG00000002714	tdp2b	99	54.848	ENSCCAG00000022734	TDP2	96	54.848	Cebus_capucinus
ENSHBUG00000002714	tdp2b	95	55.271	ENSCATG00000022076	TDP2	92	56.738	Cercocebus_atys
ENSHBUG00000002714	tdp2b	98	52.877	ENSCLAG00000002072	TDP2	98	52.877	Chinchilla_lanigera
ENSHBUG00000002714	tdp2b	99	53.994	ENSCSAG00000007769	TDP2	97	53.994	Chlorocebus_sabaeus
ENSHBUG00000002714	tdp2b	95	53.276	ENSCPBG00000006551	TDP2	86	53.276	Chrysemys_picta_bellii
ENSHBUG00000002714	tdp2b	95	54.467	ENSCANG00000040122	TDP2	97	52.893	Colobus_angolensis_palliatus
ENSHBUG00000002714	tdp2b	95	51.282	ENSCGRG00001000384	Tdp2	95	49.864	Cricetulus_griseus_chok1gshd
ENSHBUG00000002714	tdp2b	95	49.855	ENSCGRG00000010250	Tdp2	97	48.901	Cricetulus_griseus_crigri
ENSHBUG00000002714	tdp2b	99	78.611	ENSCVAG00000003114	tdp2b	99	78.611	Cyprinodon_variegatus
ENSHBUG00000002714	tdp2b	68	52.227	ENSDARG00000069941	tdp2a	55	52.227	Danio_rerio
ENSHBUG00000002714	tdp2b	96	65.405	ENSDARG00000035954	tdp2b	96	65.405	Danio_rerio
ENSHBUG00000002714	tdp2b	95	53.936	ENSDNOG00000044082	TDP2	92	53.936	Dasypus_novemcinctus
ENSHBUG00000002714	tdp2b	73	57.249	ENSETEG00000019096	TDP2	96	57.249	Echinops_telfairi
ENSHBUG00000002714	tdp2b	68	47.368	ENSEBUG00000006535	tdp2a	58	47.368	Eptatretus_burgeri
ENSHBUG00000002714	tdp2b	95	53.846	ENSEASG00005007656	TDP2	93	53.846	Equus_asinus_asinus
ENSHBUG00000002714	tdp2b	95	53.561	ENSECAG00000014264	TDP2	93	53.561	Equus_caballus
ENSHBUG00000002714	tdp2b	95	54.203	ENSEEUG00000010776	TDP2	93	54.755	Erinaceus_europaeus
ENSHBUG00000002714	tdp2b	73	50.943	ENSELUG00000009321	tdp2a	82	49.624	Esox_lucius
ENSHBUG00000002714	tdp2b	96	70.350	ENSELUG00000016449	tdp2b	97	70.350	Esox_lucius
ENSHBUG00000002714	tdp2b	95	54.986	ENSFCAG00000025612	TDP2	93	54.986	Felis_catus
ENSHBUG00000002714	tdp2b	96	48.580	ENSFALG00000004710	TDP2	96	47.645	Ficedula_albicollis
ENSHBUG00000002714	tdp2b	75	55.872	ENSFDAG00000006512	TDP2	96	55.872	Fukomys_damarensis
ENSHBUG00000002714	tdp2b	76	58.909	ENSFHEG00000013560	-	92	58.909	Fundulus_heteroclitus
ENSHBUG00000002714	tdp2b	95	51.567	ENSGALG00000013637	TDP2	94	49.444	Gallus_gallus
ENSHBUG00000002714	tdp2b	95	54.416	ENSGAGG00000002853	TDP2	86	54.416	Gopherus_agassizii
ENSHBUG00000002714	tdp2b	95	54.467	ENSGGOG00000014237	TDP2	92	56.028	Gorilla_gorilla
ENSHBUG00000002714	tdp2b	95	54.571	ENSHGLG00000008655	TDP2	94	54.571	Heterocephalus_glaber_female
ENSHBUG00000002714	tdp2b	95	54.571	ENSHGLG00100019087	TDP2	94	54.571	Heterocephalus_glaber_male
ENSHBUG00000002714	tdp2b	99	66.220	ENSIPUG00000013691	tdp2b	99	66.220	Ictalurus_punctatus
ENSHBUG00000002714	tdp2b	95	50.427	ENSJJAG00000021685	Tdp2	97	50.427	Jaculus_jaculus
ENSHBUG00000002714	tdp2b	72	63.218	ENSKMAG00000015485	-	83	63.218	Kryptolebias_marmoratus
ENSHBUG00000002714	tdp2b	96	54.039	ENSLACG00000008852	TDP2	95	54.039	Latimeria_chalumnae
ENSHBUG00000002714	tdp2b	75	64.029	ENSLOCG00000005817	tdp2b	99	64.029	Lepisosteus_oculatus
ENSHBUG00000002714	tdp2b	95	54.131	ENSLAFG00000002567	TDP2	95	54.131	Loxodonta_africana
ENSHBUG00000002714	tdp2b	95	55.331	ENSMFAG00000045296	TDP2	97	53.719	Macaca_fascicularis
ENSHBUG00000002714	tdp2b	95	55.331	ENSMMUG00000009803	TDP2	97	53.719	Macaca_mulatta
ENSHBUG00000002714	tdp2b	95	55.331	ENSMNEG00000038003	TDP2	97	53.719	Macaca_nemestrina
ENSHBUG00000002714	tdp2b	95	55.620	ENSMLEG00000028883	TDP2	94	55.620	Mandrillus_leucophaeus
ENSHBUG00000002714	tdp2b	99	77.437	ENSMAMG00000013654	tdp2b	99	77.437	Mastacembelus_armatus
ENSHBUG00000002714	tdp2b	72	79.693	ENSMZEG00005004055	tdp2b	87	79.693	Maylandia_zebra
ENSHBUG00000002714	tdp2b	100	96.122	ENSMZEG00005003950	tdp2b	100	96.122	Maylandia_zebra
ENSHBUG00000002714	tdp2b	69	77.912	ENSMZEG00005003980	-	80	77.912	Maylandia_zebra
ENSHBUG00000002714	tdp2b	82	79.125	ENSMZEG00005004126	tdp2b	99	79.125	Maylandia_zebra
ENSHBUG00000002714	tdp2b	74	77.820	ENSMZEG00005004103	tdp2b	89	77.820	Maylandia_zebra
ENSHBUG00000002714	tdp2b	75	80.297	ENSMZEG00005004077	tdp2b	91	80.297	Maylandia_zebra
ENSHBUG00000002714	tdp2b	77	79.783	ENSMZEG00005004153	tdp2b	96	79.783	Maylandia_zebra
ENSHBUG00000002714	tdp2b	95	52.137	ENSMGAG00000008014	TDP2	91	52.137	Meleagris_gallopavo
ENSHBUG00000002714	tdp2b	95	50.997	ENSMAUG00000014451	Tdp2	99	49.086	Mesocricetus_auratus
ENSHBUG00000002714	tdp2b	99	53.073	ENSMICG00000000039	TDP2	96	53.073	Microcebus_murinus
ENSHBUG00000002714	tdp2b	95	52.707	ENSMOCG00000002823	Tdp2	99	50.653	Microtus_ochrogaster
ENSHBUG00000002714	tdp2b	88	52.923	ENSMODG00000011653	TDP2	94	55.873	Monodelphis_domestica
ENSHBUG00000002714	tdp2b	81	58.644	ENSMALG00000005368	-	99	58.644	Monopterus_albus
ENSHBUG00000002714	tdp2b	94	52.571	MGP_CAROLIEiJ_G0018354	Tdp2	99	50.260	Mus_caroli
ENSHBUG00000002714	tdp2b	95	52.137	ENSMUSG00000035958	Tdp2	99	50.000	Mus_musculus
ENSHBUG00000002714	tdp2b	94	50.857	MGP_PahariEiJ_G0019417	Tdp2	99	48.825	Mus_pahari
ENSHBUG00000002714	tdp2b	98	50.681	MGP_SPRETEiJ_G0019220	Tdp2	94	50.681	Mus_spretus
ENSHBUG00000002714	tdp2b	95	54.131	ENSMPUG00000004516	TDP2	94	54.131	Mustela_putorius_furo
ENSHBUG00000002714	tdp2b	94	48.857	ENSMLUG00000013506	TDP2	93	49.714	Myotis_lucifugus
ENSHBUG00000002714	tdp2b	97	48.753	ENSNGAG00000001375	Tdp2	93	48.753	Nannospalax_galili
ENSHBUG00000002714	tdp2b	95	54.755	ENSNLEG00000002447	TDP2	95	54.701	Nomascus_leucogenys
ENSHBUG00000002714	tdp2b	95	54.674	ENSOPRG00000016299	TDP2	97	54.674	Ochotona_princeps
ENSHBUG00000002714	tdp2b	71	57.915	ENSODEG00000014018	TDP2	87	57.915	Octodon_degus
ENSHBUG00000002714	tdp2b	95	53.541	ENSOCUG00000013773	TDP2	93	53.541	Oryctolagus_cuniculus
ENSHBUG00000002714	tdp2b	74	59.630	ENSORLG00000001661	-	99	59.630	Oryzias_latipes
ENSHBUG00000002714	tdp2b	74	59.630	ENSORLG00020004634	-	99	59.630	Oryzias_latipes_hni
ENSHBUG00000002714	tdp2b	74	50.554	ENSORLG00015008190	-	99	50.554	Oryzias_latipes_hsok
ENSHBUG00000002714	tdp2b	71	58.755	ENSOMEG00000015899	-	93	58.730	Oryzias_melastigma
ENSHBUG00000002714	tdp2b	99	53.425	ENSOGAG00000025303	TDP2	93	53.867	Otolemur_garnettii
ENSHBUG00000002714	tdp2b	95	54.179	ENSPPAG00000029023	TDP2	93	55.674	Pan_paniscus
ENSHBUG00000002714	tdp2b	95	54.131	ENSPPRG00000015398	TDP2	93	54.131	Panthera_pardus
ENSHBUG00000002714	tdp2b	74	56.554	ENSPTIG00000018574	TDP2	91	56.554	Panthera_tigris_altaica
ENSHBUG00000002714	tdp2b	95	54.179	ENSPTRG00000017778	TDP2	92	55.674	Pan_troglodytes
ENSHBUG00000002714	tdp2b	95	55.102	ENSPANG00000017590	TDP2	97	53.678	Papio_anubis
ENSHBUG00000002714	tdp2b	96	67.409	ENSPKIG00000006483	tdp2b	96	67.409	Paramormyrops_kingsleyae
ENSHBUG00000002714	tdp2b	74	58.394	ENSPSIG00000004948	TDP2	94	58.394	Pelodiscus_sinensis
ENSHBUG00000002714	tdp2b	96	51.124	ENSPEMG00000001788	Tdp2	99	50.000	Peromyscus_maniculatus_bairdii
ENSHBUG00000002714	tdp2b	71	43.273	ENSPMAG00000001570	tdp2b	99	43.911	Petromyzon_marinus
ENSHBUG00000002714	tdp2b	95	53.561	ENSPCIG00000007316	TDP2	91	52.603	Phascolarctos_cinereus
ENSHBUG00000002714	tdp2b	73	57.034	ENSPFOG00000017990	-	95	57.034	Poecilia_formosa
ENSHBUG00000002714	tdp2b	73	56.654	ENSPLAG00000019439	-	83	56.654	Poecilia_latipinna
ENSHBUG00000002714	tdp2b	83	53.289	ENSPMEG00000010824	-	98	53.289	Poecilia_mexicana
ENSHBUG00000002714	tdp2b	95	54.131	ENSPPYG00000016282	TDP2	86	54.131	Pongo_abelii
ENSHBUG00000002714	tdp2b	95	54.467	ENSPCOG00000021415	TDP2	94	57.249	Propithecus_coquereli
ENSHBUG00000002714	tdp2b	100	93.352	ENSPNYG00000011532	tdp2b	100	93.352	Pundamilia_nyererei
ENSHBUG00000002714	tdp2b	77	76.109	ENSPNYG00000011504	tdp2b	94	76.109	Pundamilia_nyererei
ENSHBUG00000002714	tdp2b	69	57.430	ENSPNAG00000022162	tdp2a	63	57.430	Pygocentrus_nattereri
ENSHBUG00000002714	tdp2b	94	50.729	ENSRNOG00000018246	Tdp2	99	49.194	Rattus_norvegicus
ENSHBUG00000002714	tdp2b	95	54.755	ENSRBIG00000037119	TDP2	97	53.168	Rhinopithecus_bieti
ENSHBUG00000002714	tdp2b	95	54.986	ENSRROG00000005025	TDP2	92	56.738	Rhinopithecus_roxellana
ENSHBUG00000002714	tdp2b	99	54.062	ENSSBOG00000028734	TDP2	92	57.092	Saimiri_boliviensis_boliviensis
ENSHBUG00000002714	tdp2b	94	55.271	ENSSHAG00000002506	TDP2	90	55.271	Sarcophilus_harrisii
ENSHBUG00000002714	tdp2b	70	55.118	ENSSFOG00015011322	-	71	53.725	Scleropages_formosus
ENSHBUG00000002714	tdp2b	76	53.430	ENSSARG00000013547	TDP2	97	53.430	Sorex_araneus
ENSHBUG00000002714	tdp2b	95	51.558	ENSSPUG00000008288	TDP2	95	51.558	Sphenodon_punctatus
ENSHBUG00000002714	tdp2b	95	53.561	ENSSSCG00000001092	TDP2	93	53.561	Sus_scrofa
ENSHBUG00000002714	tdp2b	70	56.078	ENSTGUG00000009035	TDP2	97	56.078	Taeniopygia_guttata
ENSHBUG00000002714	tdp2b	73	58.672	ENSTRUG00000012218	-	96	56.727	Takifugu_rubripes
ENSHBUG00000002714	tdp2b	99	78.273	ENSTRUG00000014347	tdp2b	99	78.273	Takifugu_rubripes
ENSHBUG00000002714	tdp2b	99	77.778	ENSTNIG00000017792	tdp2b	99	77.778	Tetraodon_nigroviridis
ENSHBUG00000002714	tdp2b	71	61.686	ENSTNIG00000010260	TDP2	99	61.686	Tetraodon_nigroviridis
ENSHBUG00000002714	tdp2b	95	53.977	ENSTTRG00000016376	TDP2	93	54.830	Tursiops_truncatus
ENSHBUG00000002714	tdp2b	95	52.478	ENSUAMG00000025939	TDP2	94	52.478	Ursus_americanus
ENSHBUG00000002714	tdp2b	73	57.895	ENSUMAG00000020111	TDP2	88	57.895	Ursus_maritimus
ENSHBUG00000002714	tdp2b	94	55.682	ENSXETG00000014826	tdp2	93	55.682	Xenopus_tropicalis
ENSHBUG00000002714	tdp2b	69	60.000	ENSXCOG00000010778	-	69	60.000	Xiphophorus_couchianus
ENSHBUG00000002714	tdp2b	69	60.159	ENSXMAG00000022252	-	73	60.159	Xiphophorus_maculatus