EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000002942 (Gene tree)
Gene ID: 102289978
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13454 bases
Position: chrJH425368.1:864059-877512
Accession: 102289978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000001780	ARS2	PF04959.13	1.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000013213	-	7222	XM_005922108	ENSHBUP00000001780	911 (aa)	XP_005922170	UPI0003BCA8DB

Gene Model

Click here to download ENSHBUG00000002942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000002942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000002942	srrt	50	75.546	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSHBUG00000002942	srrt	92	91.558	ENSAPOG00000002304	srrt	95	91.201	Acanthochromis_polyacanthus
ENSHBUG00000002942	srrt	92	64.896	ENSAMEG00000014506	SRRT	51	75.824	Ailuropoda_melanoleuca
ENSHBUG00000002942	srrt	84	97.269	ENSACIG00000015795	srrt	90	97.143	Amphilophus_citrinellus
ENSHBUG00000002942	srrt	89	55.830	ENSAOCG00000009189	-	52	66.957	Amphiprion_ocellaris
ENSHBUG00000002942	srrt	92	91.776	ENSAOCG00000009693	srrt	95	91.418	Amphiprion_ocellaris
ENSHBUG00000002942	srrt	92	91.418	ENSAPEG00000003646	srrt	95	92.372	Amphiprion_percula
ENSHBUG00000002942	srrt	89	55.830	ENSAPEG00000020016	-	52	66.957	Amphiprion_percula
ENSHBUG00000002942	srrt	92	87.351	ENSATEG00000014425	srrt	88	91.648	Anabas_testudineus
ENSHBUG00000002942	srrt	52	62.322	ENSATEG00000003652	-	85	65.665	Anabas_testudineus
ENSHBUG00000002942	srrt	92	67.335	ENSACAG00000001014	SRRT	52	76.805	Anolis_carolinensis
ENSHBUG00000002942	srrt	50	74.624	ENSANAG00000031718	SRRT	53	74.624	Aotus_nancymaae
ENSHBUG00000002942	srrt	50	65.451	ENSACLG00000009423	-	52	65.435	Astatotilapia_calliptera
ENSHBUG00000002942	srrt	100	99.341	ENSACLG00000013156	srrt	100	99.341	Astatotilapia_calliptera
ENSHBUG00000002942	srrt	50	74.409	ENSBTAG00000001134	SRRT	53	74.409	Bos_taurus
ENSHBUG00000002942	srrt	61	43.243	WBGene00017085	E01A2.2	84	43.243	Caenorhabditis_elegans
ENSHBUG00000002942	srrt	50	74.409	ENSCJAG00000014917	SRRT	53	74.409	Callithrix_jacchus
ENSHBUG00000002942	srrt	92	65.157	ENSCAFG00000023538	SRRT	53	74.624	Canis_familiaris
ENSHBUG00000002942	srrt	92	65.268	ENSCAFG00020013358	SRRT	52	76.380	Canis_lupus_dingo
ENSHBUG00000002942	srrt	77	74.892	ENSCHIG00000010495	SRRT	85	74.892	Capra_hircus
ENSHBUG00000002942	srrt	50	74.892	ENSTSYG00000036426	SRRT	56	74.892	Carlito_syrichta
ENSHBUG00000002942	srrt	50	75.385	ENSCAPG00000013586	SRRT	89	70.464	Cavia_aperea
ENSHBUG00000002942	srrt	50	74.034	ENSCPOG00000001739	SRRT	53	73.987	Cavia_porcellus
ENSHBUG00000002942	srrt	50	74.624	ENSCCAG00000015877	SRRT	53	74.624	Cebus_capucinus
ENSHBUG00000002942	srrt	50	74.892	ENSCATG00000036306	SRRT	53	74.892	Cercocebus_atys
ENSHBUG00000002942	srrt	50	74.409	ENSCLAG00000007568	SRRT	89	70.878	Chinchilla_lanigera
ENSHBUG00000002942	srrt	50	74.624	ENSCSAG00000017996	SRRT	53	74.624	Chlorocebus_sabaeus
ENSHBUG00000002942	srrt	67	74.561	ENSCPBG00000011553	SRRT	85	64.029	Chrysemys_picta_bellii
ENSHBUG00000002942	srrt	96	40.405	ENSCING00000003506	-	54	50.622	Ciona_intestinalis
ENSHBUG00000002942	srrt	96	41.850	ENSCSAVG00000008394	-	81	55.714	Ciona_savignyi
ENSHBUG00000002942	srrt	50	74.892	ENSCANG00000034556	SRRT	53	74.892	Colobus_angolensis_palliatus
ENSHBUG00000002942	srrt	50	74.839	ENSCGRG00001001594	Srrt	53	74.839	Cricetulus_griseus_chok1gshd
ENSHBUG00000002942	srrt	66	80.392	ENSCGRG00000007292	Srrt	89	71.306	Cricetulus_griseus_crigri
ENSHBUG00000002942	srrt	50	63.579	ENSCSEG00000005233	-	54	65.152	Cynoglossus_semilaevis
ENSHBUG00000002942	srrt	94	77.189	ENSCSEG00000017878	srrt	95	78.867	Cynoglossus_semilaevis
ENSHBUG00000002942	srrt	92	88.915	ENSCVAG00000019848	srrt	95	87.962	Cyprinodon_variegatus
ENSHBUG00000002942	srrt	86	54.364	ENSCVAG00000017344	-	52	64.665	Cyprinodon_variegatus
ENSHBUG00000002942	srrt	92	77.374	ENSDARG00000017762	srrt	95	76.616	Danio_rerio
ENSHBUG00000002942	srrt	50	74.624	ENSDNOG00000003851	SRRT	53	74.624	Dasypus_novemcinctus
ENSHBUG00000002942	srrt	50	74.837	ENSDORG00000005584	Srrt	89	71.490	Dipodomys_ordii
ENSHBUG00000002942	srrt	79	52.564	FBgn0033062	Ars2	68	53.165	Drosophila_melanogaster
ENSHBUG00000002942	srrt	71	72.304	ENSETEG00000016175	SRRT	71	72.304	Echinops_telfairi
ENSHBUG00000002942	srrt	59	63.557	ENSEBUG00000008517	-	77	63.124	Eptatretus_burgeri
ENSHBUG00000002942	srrt	50	74.624	ENSEASG00005016956	SRRT	53	74.624	Equus_asinus_asinus
ENSHBUG00000002942	srrt	50	74.624	ENSECAG00000012292	SRRT	53	74.624	Equus_caballus
ENSHBUG00000002942	srrt	77	76.042	ENSEEUG00000009117	SRRT	57	81.081	Erinaceus_europaeus
ENSHBUG00000002942	srrt	89	59.176	ENSELUG00000021216	-	53	68.017	Esox_lucius
ENSHBUG00000002942	srrt	50	74.839	ENSFCAG00000006855	SRRT	53	74.839	Felis_catus
ENSHBUG00000002942	srrt	50	70.861	ENSFDAG00000021347	SRRT	88	68.212	Fukomys_damarensis
ENSHBUG00000002942	srrt	73	91.270	ENSFHEG00000002756	srrt	90	91.270	Fundulus_heteroclitus
ENSHBUG00000002942	srrt	50	57.563	ENSFHEG00000004105	-	93	56.992	Fundulus_heteroclitus
ENSHBUG00000002942	srrt	92	75.772	ENSGMOG00000018619	srrt	51	80.659	Gadus_morhua
ENSHBUG00000002942	srrt	92	87.589	ENSGAFG00000005423	srrt	95	86.874	Gambusia_affinis
ENSHBUG00000002942	srrt	50	63.067	ENSGAFG00000020383	-	54	63.067	Gambusia_affinis
ENSHBUG00000002942	srrt	89	55.595	ENSGACG00000001100	-	52	63.793	Gasterosteus_aculeatus
ENSHBUG00000002942	srrt	50	74.892	ENSGGOG00000001508	SRRT	61	69.022	Gorilla_gorilla
ENSHBUG00000002942	srrt	92	64.475	ENSHGLG00000008344	Srrt	89	70.664	Heterocephalus_glaber_female
ENSHBUG00000002942	srrt	92	64.965	ENSHGLG00100018857	Srrt	89	71.429	Heterocephalus_glaber_male
ENSHBUG00000002942	srrt	94	82.984	ENSHCOG00000005403	srrt	95	80.981	Hippocampus_comes
ENSHBUG00000002942	srrt	89	53.497	ENSHCOG00000008904	-	90	63.053	Hippocampus_comes
ENSHBUG00000002942	srrt	50	74.892	ENSSTOG00000013776	SRRT	53	74.892	Ictidomys_tridecemlineatus
ENSHBUG00000002942	srrt	92	65.444	ENSJJAG00000010446	Srrt	89	72.078	Jaculus_jaculus
ENSHBUG00000002942	srrt	92	87.189	ENSKMAG00000013599	srrt	55	91.429	Kryptolebias_marmoratus
ENSHBUG00000002942	srrt	50	64.092	ENSKMAG00000008468	-	53	64.211	Kryptolebias_marmoratus
ENSHBUG00000002942	srrt	94	82.639	ENSLBEG00000016308	srrt	86	91.558	Labrus_bergylta
ENSHBUG00000002942	srrt	92	55.071	ENSLACG00000001089	SRRT	53	57.701	Latimeria_chalumnae
ENSHBUG00000002942	srrt	77	84.177	ENSLOCG00000013658	srrt	74	84.177	Lepisosteus_oculatus
ENSHBUG00000002942	srrt	50	74.839	ENSLAFG00000007725	SRRT	53	74.839	Loxodonta_africana
ENSHBUG00000002942	srrt	50	74.892	ENSMFAG00000033745	SRRT	56	73.150	Macaca_fascicularis
ENSHBUG00000002942	srrt	50	74.624	ENSMMUG00000021255	SRRT	53	74.624	Macaca_mulatta
ENSHBUG00000002942	srrt	50	74.624	ENSMNEG00000041864	SRRT	53	74.624	Macaca_nemestrina
ENSHBUG00000002942	srrt	50	74.892	ENSMLEG00000029479	SRRT	55	73.150	Mandrillus_leucophaeus
ENSHBUG00000002942	srrt	50	66.094	ENSMAMG00000010681	-	52	66.450	Mastacembelus_armatus
ENSHBUG00000002942	srrt	92	88.411	ENSMAMG00000014311	srrt	95	88.530	Mastacembelus_armatus
ENSHBUG00000002942	srrt	50	65.665	ENSMZEG00005028002	-	52	65.652	Maylandia_zebra
ENSHBUG00000002942	srrt	100	99.341	ENSMZEG00005016135	srrt	100	99.341	Maylandia_zebra
ENSHBUG00000002942	srrt	50	74.409	ENSMAUG00000011386	Srrt	89	71.064	Mesocricetus_auratus
ENSHBUG00000002942	srrt	50	74.409	ENSMICG00000009471	SRRT	55	72.939	Microcebus_murinus
ENSHBUG00000002942	srrt	50	74.624	ENSMOCG00000001971	Srrt	89	71.828	Microtus_ochrogaster
ENSHBUG00000002942	srrt	92	82.656	ENSMMOG00000016399	srrt	87	90.217	Mola_mola
ENSHBUG00000002942	srrt	80	55.585	ENSMMOG00000011137	-	55	66.885	Mola_mola
ENSHBUG00000002942	srrt	50	70.726	ENSMODG00000004862	SRRT	89	71.368	Monodelphis_domestica
ENSHBUG00000002942	srrt	52	51.992	ENSMALG00000005567	-	84	53.744	Monopterus_albus
ENSHBUG00000002942	srrt	87	82.272	ENSMALG00000018604	srrt	86	86.813	Monopterus_albus
ENSHBUG00000002942	srrt	92	65.452	MGP_CAROLIEiJ_G0027870	Srrt	99	72.388	Mus_caroli
ENSHBUG00000002942	srrt	92	65.452	ENSMUSG00000037364	Srrt	99	72.388	Mus_musculus
ENSHBUG00000002942	srrt	50	75.824	MGP_PahariEiJ_G0024456	Srrt	99	72.388	Mus_pahari
ENSHBUG00000002942	srrt	92	65.452	MGP_SPRETEiJ_G0028875	Srrt	99	72.388	Mus_spretus
ENSHBUG00000002942	srrt	50	74.624	ENSMPUG00000015839	SRRT	53	74.624	Mustela_putorius_furo
ENSHBUG00000002942	srrt	50	74.409	ENSMLUG00000009975	SRRT	53	74.409	Myotis_lucifugus
ENSHBUG00000002942	srrt	92	64.692	ENSNGAG00000023715	Srrt	64	74.624	Nannospalax_galili
ENSHBUG00000002942	srrt	96	97.039	ENSNBRG00000019100	srrt	100	97.039	Neolamprologus_brichardi
ENSHBUG00000002942	srrt	73	72.768	ENSNLEG00000011987	SRRT	90	64.565	Nomascus_leucogenys
ENSHBUG00000002942	srrt	92	54.801	ENSMEUG00000011941	SRRT	52	61.207	Notamacropus_eugenii
ENSHBUG00000002942	srrt	59	72.727	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSHBUG00000002942	srrt	50	75.604	ENSODEG00000016856	SRRT	89	71.645	Octodon_degus
ENSHBUG00000002942	srrt	50	66.738	ENSONIG00000016080	-	52	66.237	Oreochromis_niloticus
ENSHBUG00000002942	srrt	97	98.086	ENSONIG00000004242	srrt	98	98.086	Oreochromis_niloticus
ENSHBUG00000002942	srrt	94	86.713	ENSORLG00000008120	srrt	52	91.209	Oryzias_latipes
ENSHBUG00000002942	srrt	94	86.713	ENSORLG00020003058	srrt	52	91.429	Oryzias_latipes_hni
ENSHBUG00000002942	srrt	94	86.597	ENSORLG00015008062	srrt	52	91.429	Oryzias_latipes_hsok
ENSHBUG00000002942	srrt	94	86.380	ENSOMEG00000003155	srrt	90	90.989	Oryzias_melastigma
ENSHBUG00000002942	srrt	89	58.202	ENSOMEG00000006963	-	53	66.812	Oryzias_melastigma
ENSHBUG00000002942	srrt	50	74.624	ENSOGAG00000017242	SRRT	53	74.624	Otolemur_garnettii
ENSHBUG00000002942	srrt	50	74.675	ENSOARG00000015645	SRRT	53	74.675	Ovis_aries
ENSHBUG00000002942	srrt	50	74.892	ENSPPAG00000041090	SRRT	53	74.892	Pan_paniscus
ENSHBUG00000002942	srrt	50	74.892	ENSPPRG00000009557	SRRT	53	74.459	Panthera_pardus
ENSHBUG00000002942	srrt	50	74.839	ENSPTIG00000014355	SRRT	53	74.839	Panthera_tigris_altaica
ENSHBUG00000002942	srrt	50	74.892	ENSPTRG00000019511	SRRT	53	74.892	Pan_troglodytes
ENSHBUG00000002942	srrt	50	73.150	ENSPANG00000020763	SRRT	54	73.150	Papio_anubis
ENSHBUG00000002942	srrt	94	72.902	ENSPKIG00000005434	srrt	50	82.561	Paramormyrops_kingsleyae
ENSHBUG00000002942	srrt	90	70.312	ENSPKIG00000022212	-	52	80.000	Paramormyrops_kingsleyae
ENSHBUG00000002942	srrt	50	75.991	ENSPSIG00000016311	SRRT	52	75.991	Pelodiscus_sinensis
ENSHBUG00000002942	srrt	94	78.035	ENSPMGG00000002841	srrt	89	89.201	Periophthalmus_magnuspinnatus
ENSHBUG00000002942	srrt	50	75.824	ENSPEMG00000010834	Srrt	89	71.645	Peromyscus_maniculatus_bairdii
ENSHBUG00000002942	srrt	92	53.633	ENSPMAG00000009614	-	55	63.057	Petromyzon_marinus
ENSHBUG00000002942	srrt	92	64.877	ENSPCIG00000000816	SRRT	53	72.805	Phascolarctos_cinereus
ENSHBUG00000002942	srrt	92	87.843	ENSPFOG00000005704	srrt	95	87.128	Poecilia_formosa
ENSHBUG00000002942	srrt	92	85.024	ENSPLAG00000021992	srrt	95	83.608	Poecilia_latipinna
ENSHBUG00000002942	srrt	92	87.604	ENSPMEG00000001182	srrt	95	86.889	Poecilia_mexicana
ENSHBUG00000002942	srrt	92	87.485	ENSPREG00000022308	srrt	95	86.770	Poecilia_reticulata
ENSHBUG00000002942	srrt	50	72.727	ENSPCAG00000001621	SRRT	53	72.727	Procavia_capensis
ENSHBUG00000002942	srrt	50	74.892	ENSPCOG00000025751	SRRT	53	74.892	Propithecus_coquereli
ENSHBUG00000002942	srrt	64	66.667	ENSPVAG00000000834	SRRT	88	66.667	Pteropus_vampyrus
ENSHBUG00000002942	srrt	96	99.886	ENSPNYG00000018710	srrt	100	99.886	Pundamilia_nyererei
ENSHBUG00000002942	srrt	86	89.241	ENSPNAG00000010629	srrt	94	59.695	Pygocentrus_nattereri
ENSHBUG00000002942	srrt	50	65.502	ENSRNOG00000048277	AABR07035787.1	92	65.502	Rattus_norvegicus
ENSHBUG00000002942	srrt	50	74.624	ENSRBIG00000035718	SRRT	67	67.742	Rhinopithecus_bieti
ENSHBUG00000002942	srrt	50	74.624	ENSRROG00000030622	SRRT	67	67.742	Rhinopithecus_roxellana
ENSHBUG00000002942	srrt	50	74.892	ENSSBOG00000033570	SRRT	53	74.892	Saimiri_boliviensis_boliviensis
ENSHBUG00000002942	srrt	69	62.577	ENSSHAG00000007349	-	74	72.708	Sarcophilus_harrisii
ENSHBUG00000002942	srrt	90	77.419	ENSSFOG00015017293	srrt	51	85.683	Scleropages_formosus
ENSHBUG00000002942	srrt	50	63.002	ENSSMAG00000018195	-	57	63.931	Scophthalmus_maximus
ENSHBUG00000002942	srrt	92	89.486	ENSSMAG00000015342	srrt	93	92.747	Scophthalmus_maximus
ENSHBUG00000002942	srrt	92	90.931	ENSSDUG00000012049	srrt	98	90.033	Seriola_dumerili
ENSHBUG00000002942	srrt	50	54.757	ENSSDUG00000002051	-	93	55.603	Seriola_dumerili
ENSHBUG00000002942	srrt	80	93.382	ENSSLDG00000017477	srrt	86	93.382	Seriola_lalandi_dorsalis
ENSHBUG00000002942	srrt	50	57.609	ENSSPAG00000018943	-	93	57.826	Stegastes_partitus
ENSHBUG00000002942	srrt	92	90.974	ENSSPAG00000005665	srrt	94	91.211	Stegastes_partitus
ENSHBUG00000002942	srrt	87	53.913	ENSTRUG00000000023	-	51	61.327	Takifugu_rubripes
ENSHBUG00000002942	srrt	89	54.182	ENSTNIG00000003111	-	53	63.853	Tetraodon_nigroviridis
ENSHBUG00000002942	srrt	71	75.635	ENSTNIG00000011779	srrt	73	87.846	Tetraodon_nigroviridis
ENSHBUG00000002942	srrt	56	76.554	ENSTBEG00000005212	SRRT	57	76.554	Tupaia_belangeri
ENSHBUG00000002942	srrt	50	74.624	ENSTTRG00000011104	SRRT	53	74.624	Tursiops_truncatus
ENSHBUG00000002942	srrt	50	74.624	ENSUAMG00000027997	SRRT	55	74.624	Ursus_americanus
ENSHBUG00000002942	srrt	50	74.624	ENSUMAG00000011295	SRRT	53	74.624	Ursus_maritimus
ENSHBUG00000002942	srrt	92	65.157	ENSVVUG00000023572	SRRT	53	74.624	Vulpes_vulpes
ENSHBUG00000002942	srrt	69	75.843	ENSXETG00000025124	srrt	71	75.796	Xenopus_tropicalis
ENSHBUG00000002942	srrt	51	52.321	ENSXCOG00000013105	-	91	53.030	Xiphophorus_couchianus
ENSHBUG00000002942	srrt	94	87.776	ENSXMAG00000007627	srrt	95	86.754	Xiphophorus_maculatus
ENSHBUG00000002942	srrt	89	54.501	ENSXMAG00000002090	-	54	63.715	Xiphophorus_maculatus