EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003299 (Gene tree)
Gene ID: 102307175
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5098 bases
Position: chrJH425657.1:436630-441727
Accession: 102307175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000002114	zf-C2H2	PF00096.26	3.9e-17	1	4
ENSHBUP00000002114	zf-C2H2	PF00096.26	3.9e-17	2	4
ENSHBUP00000002114	zf-C2H2	PF00096.26	3.9e-17	3	4
ENSHBUP00000002114	zf-C2H2	PF00096.26	3.9e-17	4	4
ENSHBUP00000002114	zf-met	PF12874.7	1.3e-07	1	3
ENSHBUP00000002114	zf-met	PF12874.7	1.3e-07	2	3
ENSHBUP00000002114	zf-met	PF12874.7	1.3e-07	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012653	-	4481	XM_005942304	ENSHBUP00000002114	464 (aa)	XP_005942366	UPI0003BD4EE8

Gene Model

Click here to download ENSHBUG00000003299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003299	-	51	46.667	ENSHBUG00000011725	-	72	40.541
ENSHBUG00000003299	-	50	40.000	ENSHBUG00000021028	-	78	40.000
ENSHBUG00000003299	-	52	39.597	ENSHBUG00000004718	-	93	39.597
ENSHBUG00000003299	-	53	46.552	ENSHBUG00000013065	-	83	46.552
ENSHBUG00000003299	-	71	41.026	ENSHBUG00000012432	-	69	41.026
ENSHBUG00000003299	-	52	36.970	ENSHBUG00000016384	-	81	36.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003299	-	73	39.831	ENSAOCG00000000463	-	55	39.831	Amphiprion_ocellaris
ENSHBUG00000003299	-	50	33.582	ENSAPEG00000011635	-	76	39.855	Amphiprion_percula
ENSHBUG00000003299	-	54	37.584	ENSATEG00000011235	-	63	37.584	Anabas_testudineus
ENSHBUG00000003299	-	100	99.569	ENSACLG00000021587	-	100	99.569	Astatotilapia_calliptera
ENSHBUG00000003299	-	61	36.667	ENSIPUG00000009577	-	73	36.667	Ictalurus_punctatus
ENSHBUG00000003299	-	100	99.140	ENSMZEG00005013916	-	100	99.140	Maylandia_zebra
ENSHBUG00000003299	-	53	33.987	ENSPMEG00000023113	-	59	36.242	Poecilia_mexicana
ENSHBUG00000003299	-	50	36.364	ENSPREG00000004006	-	54	33.333	Poecilia_reticulata
ENSHBUG00000003299	-	100	99.355	ENSPNYG00000007907	-	100	99.355	Pundamilia_nyererei