EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000003338 (Gene tree)
Gene ID: 102291404
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4663 bases
Position: chrJH425754.1:31350-36012
Accession: 102291404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022848	SLBP_RNA_bind	PF15247.6	7.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012607	-	1905	XM_005944900	ENSHBUP00000022848	278 (aa)	XP_005944962	UPI000329F393

Gene Model

Click here to download ENSHBUG00000003338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003338	-	90	48.413	ENSG00000163950	SLBP	80	56.190	Homo_sapiens
ENSHBUG00000003338	-	100	80.212	ENSAPOG00000004953	slbp	100	80.212	Acanthochromis_polyacanthus
ENSHBUG00000003338	-	54	63.576	ENSAMEG00000016915	SLBP	87	56.522	Ailuropoda_melanoleuca
ENSHBUG00000003338	-	96	77.154	ENSACIG00000022308	slbp	99	77.239	Amphilophus_citrinellus
ENSHBUG00000003338	-	100	78.521	ENSAOCG00000024545	slbp	100	78.521	Amphiprion_ocellaris
ENSHBUG00000003338	-	100	79.225	ENSAPEG00000017629	slbp	100	79.225	Amphiprion_percula
ENSHBUG00000003338	-	100	78.445	ENSATEG00000016358	slbp	100	78.445	Anabas_testudineus
ENSHBUG00000003338	-	73	55.392	ENSAPLG00000015989	-	87	56.098	Anas_platyrhynchos
ENSHBUG00000003338	-	89	47.082	ENSANAG00000034769	SLBP	80	56.190	Aotus_nancymaae
ENSHBUG00000003338	-	100	99.640	ENSACLG00000007036	-	100	99.640	Astatotilapia_calliptera
ENSHBUG00000003338	-	100	56.028	ENSAMXG00000014527	slbp	100	56.028	Astyanax_mexicanus
ENSHBUG00000003338	-	75	53.333	ENSBTAG00000001328	SLBP	82	52.174	Bos_taurus
ENSHBUG00000003338	-	89	48.000	ENSCJAG00000001790	SLBP	82	48.659	Callithrix_jacchus
ENSHBUG00000003338	-	77	51.402	ENSCAFG00000015016	SLBP	82	50.988	Canis_familiaris
ENSHBUG00000003338	-	77	51.402	ENSCAFG00020012334	SLBP	82	50.988	Canis_lupus_dingo
ENSHBUG00000003338	-	70	56.122	ENSCHIG00000019364	SLBP	82	52.174	Capra_hircus
ENSHBUG00000003338	-	78	50.901	ENSTSYG00000000376	SLBP	87	53.333	Carlito_syrichta
ENSHBUG00000003338	-	56	62.179	ENSCPOG00000000031	SLBP	81	51.587	Cavia_porcellus
ENSHBUG00000003338	-	90	48.413	ENSCATG00000029173	SLBP	80	56.190	Cercocebus_atys
ENSHBUG00000003338	-	56	65.605	ENSCLAG00000008157	SLBP	83	51.779	Chinchilla_lanigera
ENSHBUG00000003338	-	64	43.017	ENSCSAG00000015628	SLBP	60	45.902	Chlorocebus_sabaeus
ENSHBUG00000003338	-	89	52.419	ENSCPBG00000000746	SLBP	82	52.632	Chrysemys_picta_bellii
ENSHBUG00000003338	-	72	53.922	ENSCANG00000041008	SLBP	87	55.769	Colobus_angolensis_palliatus
ENSHBUG00000003338	-	78	51.152	ENSCGRG00001012991	-	87	50.988	Cricetulus_griseus_chok1gshd
ENSHBUG00000003338	-	78	51.613	ENSCGRG00001009760	-	82	51.969	Cricetulus_griseus_chok1gshd
ENSHBUG00000003338	-	78	51.613	ENSCGRG00000004506	Slbp	82	51.969	Cricetulus_griseus_crigri
ENSHBUG00000003338	-	97	72.894	ENSCSEG00000020337	-	97	72.894	Cynoglossus_semilaevis
ENSHBUG00000003338	-	94	68.821	ENSCVAG00000019592	-	94	69.434	Cyprinodon_variegatus
ENSHBUG00000003338	-	100	52.797	ENSDARG00000100558	slbp	90	53.497	Danio_rerio
ENSHBUG00000003338	-	75	54.028	ENSDNOG00000047539	SLBP	85	51.969	Dasypus_novemcinctus
ENSHBUG00000003338	-	54	62.667	ENSDORG00000003028	Slbp	91	66.234	Dipodomys_ordii
ENSHBUG00000003338	-	71	56.281	ENSETEG00000004641	SLBP	92	53.390	Echinops_telfairi
ENSHBUG00000003338	-	63	51.705	ENSEASG00005022714	SLBP	85	55.307	Equus_asinus_asinus
ENSHBUG00000003338	-	70	56.122	ENSECAG00000011689	SLBP	60	58.500	Equus_caballus
ENSHBUG00000003338	-	93	58.077	ENSELUG00000012854	slbp	91	60.385	Esox_lucius
ENSHBUG00000003338	-	56	62.179	ENSFCAG00000000169	SLBP	81	55.502	Felis_catus
ENSHBUG00000003338	-	94	48.669	ENSFALG00000010003	-	89	48.669	Ficedula_albicollis
ENSHBUG00000003338	-	57	62.264	ENSFDAG00000007592	SLBP	89	51.163	Fukomys_damarensis
ENSHBUG00000003338	-	93	72.137	ENSFHEG00000007497	slbp	94	70.611	Fundulus_heteroclitus
ENSHBUG00000003338	-	55	75.641	ENSGMOG00000015352	slbp	99	74.843	Gadus_morhua
ENSHBUG00000003338	-	95	50.190	ENSGALG00000015712	SLBP	89	50.190	Gallus_gallus
ENSHBUG00000003338	-	96	72.491	ENSGAFG00000019577	slbp	95	72.491	Gambusia_affinis
ENSHBUG00000003338	-	92	70.930	ENSGACG00000019596	slbp	95	69.962	Gasterosteus_aculeatus
ENSHBUG00000003338	-	80	55.556	ENSGAGG00000012096	SLBP	87	55.556	Gopherus_agassizii
ENSHBUG00000003338	-	90	48.413	ENSGGOG00000003167	SLBP	80	56.190	Gorilla_gorilla
ENSHBUG00000003338	-	57	58.282	ENSHGLG00000010461	-	76	50.711	Heterocephalus_glaber_female
ENSHBUG00000003338	-	56	58.333	ENSHGLG00000008313	-	72	47.222	Heterocephalus_glaber_female
ENSHBUG00000003338	-	56	59.615	ENSHGLG00100010510	-	72	48.148	Heterocephalus_glaber_male
ENSHBUG00000003338	-	57	58.282	ENSHGLG00100014906	-	76	50.711	Heterocephalus_glaber_male
ENSHBUG00000003338	-	57	61.006	ENSHGLG00100014018	-	91	57.711	Heterocephalus_glaber_male
ENSHBUG00000003338	-	98	70.803	ENSHCOG00000013425	slbp	97	70.803	Hippocampus_comes
ENSHBUG00000003338	-	78	58.559	ENSIPUG00000016780	slbp	87	55.187	Ictalurus_punctatus
ENSHBUG00000003338	-	57	62.112	ENSSTOG00000003262	SLBP	82	51.373	Ictidomys_tridecemlineatus
ENSHBUG00000003338	-	78	52.074	ENSJJAG00000002394	-	82	50.787	Jaculus_jaculus
ENSHBUG00000003338	-	78	52.074	ENSJJAG00000020549	-	82	51.575	Jaculus_jaculus
ENSHBUG00000003338	-	100	71.479	ENSKMAG00000008187	slbp	99	71.479	Kryptolebias_marmoratus
ENSHBUG00000003338	-	99	74.468	ENSLBEG00000024709	slbp	100	74.113	Labrus_bergylta
ENSHBUG00000003338	-	90	50.787	ENSLACG00000014623	SLBP	86	50.787	Latimeria_chalumnae
ENSHBUG00000003338	-	97	57.246	ENSLOCG00000011027	slbp	91	57.246	Lepisosteus_oculatus
ENSHBUG00000003338	-	77	52.336	ENSLAFG00000012933	SLBP	83	55.140	Loxodonta_africana
ENSHBUG00000003338	-	89	48.400	ENSMFAG00000030130	SLBP	77	52.020	Macaca_fascicularis
ENSHBUG00000003338	-	90	47.104	ENSMMUG00000032303	SLBP	84	55.924	Macaca_mulatta
ENSHBUG00000003338	-	54	43.396	ENSMNEG00000008082	SLBP	64	46.626	Macaca_nemestrina
ENSHBUG00000003338	-	80	50.885	ENSMLEG00000024639	SLBP	84	53.043	Mandrillus_leucophaeus
ENSHBUG00000003338	-	99	73.214	ENSMAMG00000001046	-	99	73.214	Mastacembelus_armatus
ENSHBUG00000003338	-	100	100.000	ENSMZEG00005017261	-	100	100.000	Maylandia_zebra
ENSHBUG00000003338	-	72	56.219	ENSMGAG00000013085	SLBP	87	56.219	Meleagris_gallopavo
ENSHBUG00000003338	-	78	53.881	ENSMAUG00000009490	Slbp	82	51.969	Mesocricetus_auratus
ENSHBUG00000003338	-	60	60.119	ENSMICG00000014244	SLBP	69	62.500	Microcebus_murinus
ENSHBUG00000003338	-	78	51.613	ENSMOCG00000015826	Slbp	86	57.000	Microtus_ochrogaster
ENSHBUG00000003338	-	91	66.142	ENSMMOG00000010181	slbp	92	66.142	Mola_mola
ENSHBUG00000003338	-	78	51.364	ENSMODG00000004304	SLBP	89	50.195	Monodelphis_domestica
ENSHBUG00000003338	-	100	76.678	ENSMALG00000013883	-	74	76.678	Monopterus_albus
ENSHBUG00000003338	-	78	51.613	MGP_CAROLIEiJ_G0027117	Slbp	90	54.884	Mus_caroli
ENSHBUG00000003338	-	78	51.613	ENSMUSG00000004642	Slbp	84	57.000	Mus_musculus
ENSHBUG00000003338	-	78	51.613	MGP_PahariEiJ_G0016901	Slbp	83	57.000	Mus_pahari
ENSHBUG00000003338	-	78	51.613	MGP_SPRETEiJ_G0028113	Slbp	84	57.000	Mus_spretus
ENSHBUG00000003338	-	59	55.152	ENSMPUG00000011139	SLBP	79	57.988	Mustela_putorius_furo
ENSHBUG00000003338	-	54	63.816	ENSMLUG00000004425	SLBP	82	51.232	Myotis_lucifugus
ENSHBUG00000003338	-	78	54.128	ENSNGAG00000020799	Slbp	82	50.800	Nannospalax_galili
ENSHBUG00000003338	-	95	92.015	ENSNBRG00000006044	-	96	92.015	Neolamprologus_brichardi
ENSHBUG00000003338	-	90	47.104	ENSNLEG00000000048	SLBP	80	56.190	Nomascus_leucogenys
ENSHBUG00000003338	-	53	64.626	ENSMEUG00000002501	SLBP	97	58.289	Notamacropus_eugenii
ENSHBUG00000003338	-	56	67.516	ENSODEG00000012641	SLBP	85	51.779	Octodon_degus
ENSHBUG00000003338	-	100	95.683	ENSONIG00000017469	-	100	95.683	Oreochromis_niloticus
ENSHBUG00000003338	-	73	57.426	ENSOANG00000014243	SLBP	82	57.426	Ornithorhynchus_anatinus
ENSHBUG00000003338	-	92	64.981	ENSORLG00000024887	-	90	65.759	Oryzias_latipes
ENSHBUG00000003338	-	92	63.813	ENSORLG00020007798	slbp	90	63.813	Oryzias_latipes_hni
ENSHBUG00000003338	-	92	63.424	ENSORLG00015016656	slbp	90	63.424	Oryzias_latipes_hsok
ENSHBUG00000003338	-	90	65.613	ENSOMEG00000010818	slbp	96	63.043	Oryzias_melastigma
ENSHBUG00000003338	-	75	55.660	ENSOGAG00000009750	SLBP	82	51.172	Otolemur_garnettii
ENSHBUG00000003338	-	54	63.576	ENSOARG00000016090	SLBP	87	57.005	Ovis_aries
ENSHBUG00000003338	-	90	48.810	ENSPPAG00000033300	SLBP	80	56.190	Pan_paniscus
ENSHBUG00000003338	-	55	62.338	ENSPPRG00000016897	SLBP	89	50.794	Panthera_pardus
ENSHBUG00000003338	-	89	48.800	ENSPTRG00000015832	SLBP	80	56.190	Pan_troglodytes
ENSHBUG00000003338	-	77	50.222	ENSPANG00000004932	SLBP	80	56.190	Papio_anubis
ENSHBUG00000003338	-	89	59.761	ENSPKIG00000006183	slbp	92	56.985	Paramormyrops_kingsleyae
ENSHBUG00000003338	-	88	62.602	ENSPMGG00000017684	-	99	64.151	Periophthalmus_magnuspinnatus
ENSHBUG00000003338	-	78	52.535	ENSPEMG00000018369	Slbp	82	52.174	Peromyscus_maniculatus_bairdii
ENSHBUG00000003338	-	71	55.941	ENSPCIG00000013575	SLBP	70	51.538	Phascolarctos_cinereus
ENSHBUG00000003338	-	96	72.862	ENSPFOG00000000462	slbp	95	72.862	Poecilia_formosa
ENSHBUG00000003338	-	96	72.862	ENSPLAG00000008300	slbp	95	72.862	Poecilia_latipinna
ENSHBUG00000003338	-	96	72.862	ENSPMEG00000020807	slbp	95	72.862	Poecilia_mexicana
ENSHBUG00000003338	-	96	73.234	ENSPREG00000004561	slbp	95	73.234	Poecilia_reticulata
ENSHBUG00000003338	-	90	48.413	ENSPPYG00000014529	SLBP	82	50.391	Pongo_abelii
ENSHBUG00000003338	-	75	52.133	ENSPCOG00000017399	SLBP	80	54.762	Propithecus_coquereli
ENSHBUG00000003338	-	60	57.988	ENSPVAG00000002807	SLBP	73	55.072	Pteropus_vampyrus
ENSHBUG00000003338	-	100	100.000	ENSPNYG00000005451	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000003338	-	100	55.944	ENSPNAG00000018503	slbp	100	55.944	Pygocentrus_nattereri
ENSHBUG00000003338	-	78	51.613	ENSRNOG00000037162	Slbp	82	51.383	Rattus_norvegicus
ENSHBUG00000003338	-	90	48.413	ENSRBIG00000039159	SLBP	80	56.190	Rhinopithecus_bieti
ENSHBUG00000003338	-	89	48.606	ENSRROG00000030081	SLBP	84	50.391	Rhinopithecus_roxellana
ENSHBUG00000003338	-	63	55.618	ENSSBOG00000033897	SLBP	85	54.696	Saimiri_boliviensis_boliviensis
ENSHBUG00000003338	-	71	55.941	ENSSHAG00000013939	SLBP	82	51.341	Sarcophilus_harrisii
ENSHBUG00000003338	-	91	59.144	ENSSFOG00015019429	slbp	89	59.144	Scleropages_formosus
ENSHBUG00000003338	-	100	72.792	ENSSMAG00000016028	-	100	72.792	Scophthalmus_maximus
ENSHBUG00000003338	-	100	78.214	ENSSDUG00000000855	-	100	78.214	Seriola_dumerili
ENSHBUG00000003338	-	58	78.882	ENSSLDG00000022893	-	89	83.117	Seriola_lalandi_dorsalis
ENSHBUG00000003338	-	96	57.303	ENSSLDG00000007554	-	85	56.554	Seriola_lalandi_dorsalis
ENSHBUG00000003338	-	90	46.825	ENSSPUG00000016007	SLBP	87	49.609	Sphenodon_punctatus
ENSHBUG00000003338	-	99	78.417	ENSSPAG00000004021	slbp	100	78.846	Stegastes_partitus
ENSHBUG00000003338	-	91	49.213	ENSSSCG00000008676	SLBP	82	51.779	Sus_scrofa
ENSHBUG00000003338	-	89	50.403	ENSTGUG00000010626	-	88	50.806	Taeniopygia_guttata
ENSHBUG00000003338	-	94	71.756	ENSTRUG00000000688	slbp	92	71.756	Takifugu_rubripes
ENSHBUG00000003338	-	90	67.729	ENSTNIG00000000484	-	95	68.000	Tetraodon_nigroviridis
ENSHBUG00000003338	-	54	61.589	ENSTTRG00000004010	-	97	54.348	Tursiops_truncatus
ENSHBUG00000003338	-	54	63.333	ENSTTRG00000010901	-	88	55.882	Tursiops_truncatus
ENSHBUG00000003338	-	70	55.102	ENSUAMG00000012990	SLBP	81	50.593	Ursus_americanus
ENSHBUG00000003338	-	77	51.869	ENSVVUG00000015578	-	82	52.174	Vulpes_vulpes
ENSHBUG00000003338	-	91	49.807	ENSXETG00000003876	slbp	95	49.807	Xenopus_tropicalis
ENSHBUG00000003338	-	89	73.092	ENSXCOG00000008275	slbp	93	73.092	Xiphophorus_couchianus
ENSHBUG00000003338	-	96	71.747	ENSXMAG00000001331	-	94	71.747	Xiphophorus_maculatus