EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003376 (Gene tree)
Gene ID: 102308827
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8363 bases
Position: chrJH425467.1:1123155-1131517
Accession: 102308827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000002149	RNase_Zc3h12a	PF11977.8	3.8e-65	1	1
ENSHBUP00000022863	RNase_Zc3h12a	PF11977.8	8.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012584	-	2310	XM_005932547	ENSHBUP00000002149	769 (aa)	XP_005932609	-
ENSHBUT00000012566	-	495	-	ENSHBUP00000022863	164 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000003376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003376	-	91	47.333	ENSHBUG00000021584	-	85	57.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003376	-	91	85.065	ENSACIG00000005689	-	74	90.987	Amphilophus_citrinellus
ENSHBUG00000003376	-	91	57.616	ENSAPLG00000003874	ZC3H12B	99	74.744	Anas_platyrhynchos
ENSHBUG00000003376	-	99	44.828	ENSAMXG00000038308	-	68	56.793	Astyanax_mexicanus
ENSHBUG00000003376	-	99	47.172	ENSAMXG00000005320	-	69	59.821	Astyanax_mexicanus
ENSHBUG00000003376	-	91	58.278	ENSCSAG00000011955	-	67	68.421	Chlorocebus_sabaeus
ENSHBUG00000003376	-	91	57.616	ENSECAG00000020993	ZC3H12B	67	67.391	Equus_caballus
ENSHBUG00000003376	-	91	56.954	ENSFALG00000004293	ZC3H12B	70	74.216	Ficedula_albicollis
ENSHBUG00000003376	-	91	80.000	ENSFHEG00000014717	-	94	90.033	Fundulus_heteroclitus
ENSHBUG00000003376	-	87	80.556	ENSGAFG00000004701	-	84	64.858	Gambusia_affinis
ENSHBUG00000003376	-	86	78.322	ENSHCOG00000017425	-	96	63.203	Hippocampus_comes
ENSHBUG00000003376	-	91	67.785	ENSIPUG00000014830	-	68	64.823	Ictalurus_punctatus
ENSHBUG00000003376	-	87	72.727	ENSLOCG00000010717	-	50	64.286	Lepisosteus_oculatus
ENSHBUG00000003376	-	91	78.667	ENSMALG00000016807	-	91	78.065	Monopterus_albus
ENSHBUG00000003376	-	91	56.376	ENSMUSG00000035045	Zc3h12b	66	85.714	Mus_musculus
ENSHBUG00000003376	-	91	70.779	ENSORLG00000009188	-	97	82.985	Oryzias_latipes
ENSHBUG00000003376	-	91	70.779	ENSORLG00020019033	-	92	82.985	Oryzias_latipes_hni
ENSHBUG00000003376	-	91	70.130	ENSORLG00015020619	-	87	83.262	Oryzias_latipes_hsok
ENSHBUG00000003376	-	91	73.333	ENSOMEG00000018642	-	97	60.938	Oryzias_melastigma
ENSHBUG00000003376	-	87	64.052	ENSPKIG00000012595	-	80	48.087	Paramormyrops_kingsleyae
ENSHBUG00000003376	-	91	81.333	ENSPLAG00000011687	-	77	87.773	Poecilia_latipinna
ENSHBUG00000003376	-	91	67.114	ENSPNYG00000015874	-	78	77.632	Pundamilia_nyererei
ENSHBUG00000003376	-	100	98.711	ENSPNYG00000007151	-	100	98.711	Pundamilia_nyererei
ENSHBUG00000003376	-	87	72.917	ENSPNAG00000017483	-	70	66.297	Pygocentrus_nattereri
ENSHBUG00000003376	-	91	58.667	ENSRNOG00000011508	Zc3h12b	68	67.982	Rattus_norvegicus
ENSHBUG00000003376	-	91	58.824	ENSSDUG00000014078	zc3h12b	84	70.435	Seriola_dumerili
ENSHBUG00000003376	-	91	76.667	ENSTRUG00000015402	-	94	83.626	Takifugu_rubripes
ENSHBUG00000003376	-	85	59.480	ENSTNIG00000015684	-	100	58.716	Tetraodon_nigroviridis
ENSHBUG00000003376	-	91	80.667	ENSXCOG00000007996	-	84	86.900	Xiphophorus_couchianus