EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003411 (Gene tree)
Gene ID: 102297423
Gene Symbol: -
Alias: -
Full Name: threonyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 14642 bases
Position: chrJH425518.1:993929-1008570
Accession: 102297423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000002202	HGTP_anticodon	PF03129.20	3.7e-18	1	1
ENSHBUP00000002186	HGTP_anticodon	PF03129.20	3.8e-18	1	1
ENSHBUP00000002202	tRNA-synt_2b	PF00587.25	5.4e-38	1	1
ENSHBUP00000002186	tRNA-synt_2b	PF00587.25	5.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012512	-	2383	XM_005936125	ENSHBUP00000002186	694 (aa)	XP_005936187	UPI0003BD6F52
ENSHBUT00000012498	-	2356	XM_005936127	ENSHBUP00000002202	684 (aa)	XP_005936189	UPI0003BCB67F

Gene Model

Click here to download ENSHBUG00000003411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003411	-	96	54.751	ENSHBUG00000020986	tarsl2	81	54.751
ENSHBUG00000003411	-	97	52.117	ENSHBUG00000011236	tars	94	52.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003411	-	96	54.273	ENSG00000185418	TARSL2	99	49.315	Homo_sapiens
ENSHBUG00000003411	-	62	80.706	ENSAPOG00000015706	-	100	80.706	Acanthochromis_polyacanthus
ENSHBUG00000003411	-	96	53.471	ENSAMEG00000003074	TARSL2	86	53.756	Ailuropoda_melanoleuca
ENSHBUG00000003411	-	65	95.701	ENSACIG00000007759	-	95	95.701	Amphilophus_citrinellus
ENSHBUG00000003411	-	63	86.682	ENSAOCG00000012359	-	99	86.682	Amphiprion_ocellaris
ENSHBUG00000003411	-	62	82.824	ENSAPEG00000007512	-	100	82.824	Amphiprion_percula
ENSHBUG00000003411	-	100	86.023	ENSATEG00000023568	-	100	86.023	Anabas_testudineus
ENSHBUG00000003411	-	96	53.881	ENSAPLG00000008485	TARSL2	93	53.961	Anas_platyrhynchos
ENSHBUG00000003411	-	80	53.247	ENSACAG00000000199	TARSL2	80	53.247	Anolis_carolinensis
ENSHBUG00000003411	-	96	53.046	ENSACAG00000003076	-	99	53.046	Anolis_carolinensis
ENSHBUG00000003411	-	96	50.825	ENSANAG00000020687	TARSL2	86	51.735	Aotus_nancymaae
ENSHBUG00000003411	-	100	99.424	ENSACLG00000020262	-	100	99.424	Astatotilapia_calliptera
ENSHBUG00000003411	-	97	73.763	ENSAMXG00000012533	-	97	73.294	Astyanax_mexicanus
ENSHBUG00000003411	-	96	51.551	ENSBTAG00000007651	TARSL2	84	51.551	Bos_taurus
ENSHBUG00000003411	-	97	62.814	ENSCJAG00000017350	TARSL2	78	62.814	Callithrix_jacchus
ENSHBUG00000003411	-	96	53.858	ENSCAFG00000010453	TARSL2	84	53.001	Canis_familiaris
ENSHBUG00000003411	-	99	51.585	ENSCAFG00020020868	TARSL2	97	56.146	Canis_lupus_dingo
ENSHBUG00000003411	-	85	52.246	ENSCHIG00000015264	TARSL2	82	52.246	Capra_hircus
ENSHBUG00000003411	-	96	52.252	ENSTSYG00000004538	TARSL2	96	52.000	Carlito_syrichta
ENSHBUG00000003411	-	90	48.160	ENSCAPG00000004815	TARSL2	93	48.160	Cavia_aperea
ENSHBUG00000003411	-	96	53.153	ENSCPOG00000008850	TARSL2	95	53.153	Cavia_porcellus
ENSHBUG00000003411	-	96	53.973	ENSCCAG00000030068	TARSL2	83	55.047	Cebus_capucinus
ENSHBUG00000003411	-	97	52.924	ENSCATG00000037383	TARSL2	88	52.924	Cercocebus_atys
ENSHBUG00000003411	-	96	53.153	ENSCLAG00000016873	TARSL2	90	52.035	Chinchilla_lanigera
ENSHBUG00000003411	-	96	53.502	ENSCSAG00000016828	TARSL2	84	53.166	Chlorocebus_sabaeus
ENSHBUG00000003411	-	90	52.456	ENSCHOG00000001319	TARSL2	97	52.269	Choloepus_hoffmanni
ENSHBUG00000003411	-	96	53.614	ENSCPBG00000010792	TARSL2	84	53.614	Chrysemys_picta_bellii
ENSHBUG00000003411	-	96	53.651	ENSCANG00000035438	TARSL2	95	53.314	Colobus_angolensis_palliatus
ENSHBUG00000003411	-	96	53.443	ENSCGRG00001020827	Tarsl2	84	53.443	Cricetulus_griseus_chok1gshd
ENSHBUG00000003411	-	96	53.443	ENSCGRG00000011398	Tarsl2	93	53.443	Cricetulus_griseus_crigri
ENSHBUG00000003411	-	99	80.058	ENSCSEG00000002562	-	99	86.620	Cynoglossus_semilaevis
ENSHBUG00000003411	-	63	90.719	ENSCVAG00000009253	-	100	90.719	Cyprinodon_variegatus
ENSHBUG00000003411	-	62	78.622	ENSDARG00000075385	LO017852.1	99	78.622	Danio_rerio
ENSHBUG00000003411	-	96	51.647	ENSDNOG00000046161	TARSL2	95	51.647	Dasypus_novemcinctus
ENSHBUG00000003411	-	96	53.544	ENSDORG00000009653	Tarsl2	95	53.544	Dipodomys_ordii
ENSHBUG00000003411	-	96	53.323	ENSEASG00005017718	TARSL2	84	53.323	Equus_asinus_asinus
ENSHBUG00000003411	-	96	53.323	ENSECAG00000024315	TARSL2	84	53.323	Equus_caballus
ENSHBUG00000003411	-	87	55.500	ENSEEUG00000014117	TARSL2	98	55.500	Erinaceus_europaeus
ENSHBUG00000003411	-	100	76.945	ENSELUG00000013552	-	100	76.945	Esox_lucius
ENSHBUG00000003411	-	96	53.651	ENSFCAG00000008836	TARSL2	83	54.849	Felis_catus
ENSHBUG00000003411	-	96	54.600	ENSFALG00000012444	TARSL2	89	54.600	Ficedula_albicollis
ENSHBUG00000003411	-	97	50.673	ENSFDAG00000002767	TARSL2	96	50.671	Fukomys_damarensis
ENSHBUG00000003411	-	65	90.745	ENSFHEG00000021877	-	81	90.745	Fundulus_heteroclitus
ENSHBUG00000003411	-	97	77.877	ENSGMOG00000006184	-	100	76.286	Gadus_morhua
ENSHBUG00000003411	-	98	53.028	ENSGALG00000043416	-	91	63.959	Gallus_gallus
ENSHBUG00000003411	-	96	54.148	ENSGALG00000003985	TARSL2	88	52.958	Gallus_gallus
ENSHBUG00000003411	-	100	82.421	ENSGAFG00000012691	-	100	82.421	Gambusia_affinis
ENSHBUG00000003411	-	100	84.870	ENSGACG00000011734	-	100	84.870	Gasterosteus_aculeatus
ENSHBUG00000003411	-	96	53.313	ENSGAGG00000010775	TARSL2	84	53.313	Gopherus_agassizii
ENSHBUG00000003411	-	96	54.123	ENSGGOG00000007839	TARSL2	86	54.890	Gorilla_gorilla
ENSHBUG00000003411	-	96	52.632	ENSHGLG00000011618	TARSL2	86	52.303	Heterocephalus_glaber_female
ENSHBUG00000003411	-	96	52.632	ENSHGLG00100016769	TARSL2	96	52.303	Heterocephalus_glaber_male
ENSHBUG00000003411	-	100	77.410	ENSHCOG00000014119	-	99	77.410	Hippocampus_comes
ENSHBUG00000003411	-	62	74.353	ENSIPUG00000000099	-	100	74.353	Ictalurus_punctatus
ENSHBUG00000003411	-	96	53.604	ENSSTOG00000032725	TARSL2	85	53.264	Ictidomys_tridecemlineatus
ENSHBUG00000003411	-	100	85.879	ENSKMAG00000001354	-	100	85.879	Kryptolebias_marmoratus
ENSHBUG00000003411	-	62	87.294	ENSLBEG00000026238	-	100	87.294	Labrus_bergylta
ENSHBUG00000003411	-	96	53.153	ENSLAFG00000011941	TARSL2	98	53.153	Loxodonta_africana
ENSHBUG00000003411	-	96	53.353	ENSMFAG00000001902	TARSL2	85	53.019	Macaca_fascicularis
ENSHBUG00000003411	-	96	53.502	ENSMMUG00000000278	TARSL2	85	53.166	Macaca_mulatta
ENSHBUG00000003411	-	96	53.353	ENSMNEG00000034952	TARSL2	85	53.019	Macaca_nemestrina
ENSHBUG00000003411	-	96	53.353	ENSMLEG00000035535	TARSL2	95	54.272	Mandrillus_leucophaeus
ENSHBUG00000003411	-	100	86.167	ENSMAMG00000015032	-	100	86.167	Mastacembelus_armatus
ENSHBUG00000003411	-	100	99.424	ENSMZEG00005015989	-	100	99.424	Maylandia_zebra
ENSHBUG00000003411	-	87	62.428	ENSMGAG00000004951	TARSL2	97	62.428	Meleagris_gallopavo
ENSHBUG00000003411	-	87	61.942	ENSMAUG00000015756	Tarsl2	82	61.942	Mesocricetus_auratus
ENSHBUG00000003411	-	96	53.303	ENSMICG00000013039	TARSL2	98	53.037	Microcebus_murinus
ENSHBUG00000003411	-	96	53.383	ENSMOCG00000014909	Tarsl2	84	53.383	Microtus_ochrogaster
ENSHBUG00000003411	-	64	87.699	ENSMMOG00000016135	-	100	87.699	Mola_mola
ENSHBUG00000003411	-	96	52.711	ENSMODG00000011941	TARSL2	83	52.711	Monodelphis_domestica
ENSHBUG00000003411	-	99	82.000	ENSMALG00000007340	-	99	82.000	Monopterus_albus
ENSHBUG00000003411	-	98	51.965	MGP_CAROLIEiJ_G0029834	Tarsl2	87	51.965	Mus_caroli
ENSHBUG00000003411	-	98	51.820	ENSMUSG00000030515	Tarsl2	87	51.820	Mus_musculus
ENSHBUG00000003411	-	96	52.782	MGP_PahariEiJ_G0013059	Tarsl2	84	52.782	Mus_pahari
ENSHBUG00000003411	-	97	53.744	ENSMPUG00000011032	TARSL2	87	53.744	Mustela_putorius_furo
ENSHBUG00000003411	-	81	52.993	ENSMLUG00000024482	-	95	52.993	Myotis_lucifugus
ENSHBUG00000003411	-	97	51.387	ENSMLUG00000012870	-	86	51.387	Myotis_lucifugus
ENSHBUG00000003411	-	96	52.232	ENSNGAG00000020451	Tarsl2	89	50.702	Nannospalax_galili
ENSHBUG00000003411	-	100	99.561	ENSNBRG00000003429	-	100	99.561	Neolamprologus_brichardi
ENSHBUG00000003411	-	96	53.343	ENSNLEG00000000541	TARSL2	86	53.079	Nomascus_leucogenys
ENSHBUG00000003411	-	82	50.000	ENSMEUG00000002935	TARSL2	70	50.000	Notamacropus_eugenii
ENSHBUG00000003411	-	72	45.892	ENSOPRG00000002689	-	62	45.892	Ochotona_princeps
ENSHBUG00000003411	-	96	53.233	ENSODEG00000014454	TARSL2	85	52.897	Octodon_degus
ENSHBUG00000003411	-	97	97.901	ENSONIG00000006402	-	100	97.754	Oreochromis_niloticus
ENSHBUG00000003411	-	96	52.568	ENSOANG00000013263	TARSL2	98	52.568	Ornithorhynchus_anatinus
ENSHBUG00000003411	-	96	52.853	ENSOCUG00000010740	TARSL2	94	52.593	Oryctolagus_cuniculus
ENSHBUG00000003411	-	100	81.909	ENSORLG00000010391	-	100	81.909	Oryzias_latipes
ENSHBUG00000003411	-	100	83.141	ENSORLG00020008928	-	100	83.141	Oryzias_latipes_hni
ENSHBUG00000003411	-	100	83.141	ENSORLG00015014897	-	100	83.141	Oryzias_latipes_hsok
ENSHBUG00000003411	-	100	83.597	ENSOMEG00000009022	-	100	83.597	Oryzias_melastigma
ENSHBUG00000003411	-	96	52.711	ENSOGAG00000014311	TARSL2	83	52.452	Otolemur_garnettii
ENSHBUG00000003411	-	96	52.142	ENSOARG00000016573	TARSL2	95	52.142	Ovis_aries
ENSHBUG00000003411	-	96	53.973	ENSPPAG00000040066	TARSL2	97	53.698	Pan_paniscus
ENSHBUG00000003411	-	96	53.353	ENSPPRG00000017275	TARSL2	84	54.502	Panthera_pardus
ENSHBUG00000003411	-	96	53.353	ENSPTIG00000015184	TARSL2	84	53.353	Panthera_tigris_altaica
ENSHBUG00000003411	-	96	54.123	ENSPTRG00000007516	TARSL2	83	54.890	Pan_troglodytes
ENSHBUG00000003411	-	96	51.613	ENSPANG00000022401	TARSL2	85	51.304	Papio_anubis
ENSHBUG00000003411	-	98	67.883	ENSPKIG00000010658	-	99	76.596	Paramormyrops_kingsleyae
ENSHBUG00000003411	-	83	55.749	ENSPSIG00000008419	TARSL2	99	55.749	Pelodiscus_sinensis
ENSHBUG00000003411	-	63	85.714	ENSPMGG00000007785	-	99	85.714	Periophthalmus_magnuspinnatus
ENSHBUG00000003411	-	98	51.383	ENSPEMG00000019852	Tarsl2	93	51.383	Peromyscus_maniculatus_bairdii
ENSHBUG00000003411	-	96	53.163	ENSPCIG00000022481	TARSL2	82	53.163	Phascolarctos_cinereus
ENSHBUG00000003411	-	96	84.812	ENSPFOG00000013444	-	100	84.812	Poecilia_formosa
ENSHBUG00000003411	-	100	83.718	ENSPLAG00000018145	-	100	83.718	Poecilia_latipinna
ENSHBUG00000003411	-	100	84.294	ENSPMEG00000023625	-	100	84.294	Poecilia_mexicana
ENSHBUG00000003411	-	62	88.471	ENSPREG00000017312	-	100	88.471	Poecilia_reticulata
ENSHBUG00000003411	-	85	62.162	ENSPPYG00000006830	TARSL2	82	62.162	Pongo_abelii
ENSHBUG00000003411	-	88	51.078	ENSPCAG00000011132	TARSL2	75	51.078	Procavia_capensis
ENSHBUG00000003411	-	89	62.857	ENSPCOG00000026095	TARSL2	82	62.857	Propithecus_coquereli
ENSHBUG00000003411	-	88	52.368	ENSPVAG00000012240	TARSL2	77	52.368	Pteropus_vampyrus
ENSHBUG00000003411	-	100	99.568	ENSPNYG00000004232	-	100	99.568	Pundamilia_nyererei
ENSHBUG00000003411	-	97	72.973	ENSPNAG00000002308	-	97	72.511	Pygocentrus_nattereri
ENSHBUG00000003411	-	63	45.946	ENSRNOG00000024460	Tarsl2	80	45.946	Rattus_norvegicus
ENSHBUG00000003411	-	97	53.216	ENSRBIG00000035707	TARSL2	88	53.216	Rhinopithecus_bieti
ENSHBUG00000003411	-	97	53.070	ENSRROG00000029492	TARSL2	88	53.070	Rhinopithecus_roxellana
ENSHBUG00000003411	-	96	53.673	ENSSBOG00000029807	TARSL2	97	53.412	Saimiri_boliviensis_boliviensis
ENSHBUG00000003411	-	96	53.534	ENSSHAG00000010266	TARSL2	88	53.534	Sarcophilus_harrisii
ENSHBUG00000003411	-	100	68.300	ENSSFOG00015022086	tars2	100	68.300	Scleropages_formosus
ENSHBUG00000003411	-	98	85.587	ENSSMAG00000015682	-	100	85.693	Scophthalmus_maximus
ENSHBUG00000003411	-	63	91.204	ENSSDUG00000007180	-	99	91.204	Seriola_dumerili
ENSHBUG00000003411	-	62	92.254	ENSSLDG00000015367	-	99	92.254	Seriola_lalandi_dorsalis
ENSHBUG00000003411	-	59	67.160	ENSSPUG00000001523	TARSL2	98	65.094	Sphenodon_punctatus
ENSHBUG00000003411	-	100	80.403	ENSSPAG00000018887	-	100	80.403	Stegastes_partitus
ENSHBUG00000003411	-	93	52.100	ENSSSCG00000005781	TARSL2	98	51.360	Sus_scrofa
ENSHBUG00000003411	-	62	60.613	ENSTGUG00000004602	-	98	60.613	Taeniopygia_guttata
ENSHBUG00000003411	-	96	54.148	ENSTGUG00000005726	TARSL2	98	54.148	Taeniopygia_guttata
ENSHBUG00000003411	-	62	90.376	ENSTRUG00000015004	-	99	90.376	Takifugu_rubripes
ENSHBUG00000003411	-	99	75.536	ENSTNIG00000008060	-	100	75.071	Tetraodon_nigroviridis
ENSHBUG00000003411	-	71	59.155	ENSTBEG00000001134	-	73	59.155	Tupaia_belangeri
ENSHBUG00000003411	-	96	51.551	ENSTTRG00000016207	TARSL2	96	51.551	Tursiops_truncatus
ENSHBUG00000003411	-	97	53.314	ENSUMAG00000024371	TARSL2	99	57.092	Ursus_maritimus
ENSHBUG00000003411	-	99	51.873	ENSVVUG00000014742	TARSL2	98	52.709	Vulpes_vulpes
ENSHBUG00000003411	-	68	87.069	ENSXCOG00000019508	-	93	90.500	Xiphophorus_couchianus
ENSHBUG00000003411	-	100	82.997	ENSXMAG00000016382	-	100	82.997	Xiphophorus_maculatus