EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000003493 (Gene tree)
Gene ID: 102296112
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 10392 bases
Position: chrJH425518.1:966610-977001
Accession: 102296112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022904	PRP3	PF08572.10	1.7e-76	1	1
ENSHBUP00000022927	PRP3	PF08572.10	1.9e-76	1	1
ENSHBUP00000022904	PWI	PF01480.17	1.5e-11	1	1
ENSHBUP00000022927	PWI	PF01480.17	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012418	-	2569	XM_005936122	ENSHBUP00000022927	731 (aa)	XP_005936184	-
ENSHBUT00000012454	-	2064	XM_005936121	ENSHBUP00000022904	687 (aa)	XP_005936183	-

Gene Model

Click here to download ENSHBUG00000003493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003493	prpf3	99	72.439	ENSG00000117360	PRPF3	100	72.727	Homo_sapiens
ENSHBUG00000003493	prpf3	100	88.494	ENSAPOG00000015584	prpf3	100	89.205	Acanthochromis_polyacanthus
ENSHBUG00000003493	prpf3	99	72.583	ENSAMEG00000001630	PRPF3	100	72.872	Ailuropoda_melanoleuca
ENSHBUG00000003493	prpf3	100	89.266	ENSACIG00000007876	prpf3	100	89.831	Amphilophus_citrinellus
ENSHBUG00000003493	prpf3	100	88.193	ENSAOCG00000011449	prpf3	100	89.301	Amphiprion_ocellaris
ENSHBUG00000003493	prpf3	100	90.115	ENSATEG00000023583	prpf3	100	90.115	Anabas_testudineus
ENSHBUG00000003493	prpf3	99	73.121	ENSAPLG00000002440	PRPF3	100	73.121	Anas_platyrhynchos
ENSHBUG00000003493	prpf3	99	71.530	ENSACAG00000003176	PRPF3	100	73.094	Anolis_carolinensis
ENSHBUG00000003493	prpf3	99	72.439	ENSANAG00000026138	PRPF3	100	72.727	Aotus_nancymaae
ENSHBUG00000003493	prpf3	100	99.453	ENSACLG00000020127	prpf3	100	99.453	Astatotilapia_calliptera
ENSHBUG00000003493	prpf3	100	82.254	ENSAMXG00000007306	prpf3	100	81.690	Astyanax_mexicanus
ENSHBUG00000003493	prpf3	99	72.439	ENSBTAG00000013946	PRPF3	100	72.727	Bos_taurus
ENSHBUG00000003493	prpf3	81	39.076	WBGene00010844	prp-3	95	36.048	Caenorhabditis_elegans
ENSHBUG00000003493	prpf3	99	72.439	ENSCJAG00000009926	PRPF3	100	72.727	Callithrix_jacchus
ENSHBUG00000003493	prpf3	99	72.439	ENSCAFG00000011820	PRPF3	100	72.727	Canis_familiaris
ENSHBUG00000003493	prpf3	81	72.352	ENSCAFG00020019653	PRPF3	100	72.890	Canis_lupus_dingo
ENSHBUG00000003493	prpf3	99	72.439	ENSCHIG00000015434	PRPF3	100	72.727	Capra_hircus
ENSHBUG00000003493	prpf3	99	72.727	ENSTSYG00000001383	PRPF3	100	73.016	Carlito_syrichta
ENSHBUG00000003493	prpf3	93	63.142	ENSCAPG00000017812	PRPF3	95	63.297	Cavia_aperea
ENSHBUG00000003493	prpf3	99	72.583	ENSCPOG00000008068	PRPF3	100	72.872	Cavia_porcellus
ENSHBUG00000003493	prpf3	99	72.439	ENSCCAG00000026380	PRPF3	100	72.727	Cebus_capucinus
ENSHBUG00000003493	prpf3	99	59.684	ENSCATG00000041778	PRPF3	100	60.172	Cercocebus_atys
ENSHBUG00000003493	prpf3	99	72.583	ENSCLAG00000015009	PRPF3	100	72.872	Chinchilla_lanigera
ENSHBUG00000003493	prpf3	76	81.022	ENSCHOG00000011645	PRPF3	76	80.657	Choloepus_hoffmanni
ENSHBUG00000003493	prpf3	99	72.832	ENSCPBG00000008216	PRPF3	100	73.121	Chrysemys_picta_bellii
ENSHBUG00000003493	prpf3	60	59.091	ENSCING00000003312	-	99	59.091	Ciona_intestinalis
ENSHBUG00000003493	prpf3	80	54.204	ENSCSAVG00000008720	-	94	54.383	Ciona_savignyi
ENSHBUG00000003493	prpf3	99	71.861	ENSCANG00000036769	PRPF3	100	72.150	Colobus_angolensis_palliatus
ENSHBUG00000003493	prpf3	99	72.439	ENSCGRG00001019100	Prpf3	100	72.727	Cricetulus_griseus_chok1gshd
ENSHBUG00000003493	prpf3	99	72.439	ENSCGRG00000007322	Prpf3	100	72.727	Cricetulus_griseus_crigri
ENSHBUG00000003493	prpf3	100	86.544	ENSCSEG00000002532	prpf3	100	86.827	Cynoglossus_semilaevis
ENSHBUG00000003493	prpf3	100	87.914	ENSCVAG00000009318	prpf3	100	87.914	Cyprinodon_variegatus
ENSHBUG00000003493	prpf3	100	81.545	ENSDARG00000086425	prpf3	100	81.545	Danio_rerio
ENSHBUG00000003493	prpf3	99	69.264	ENSDNOG00000005904	PRPF3	100	69.120	Dasypus_novemcinctus
ENSHBUG00000003493	prpf3	93	72.516	ENSDORG00000008664	Prpf3	100	73.023	Dipodomys_ordii
ENSHBUG00000003493	prpf3	80	51.742	FBgn0036915	Prp3	99	51.885	Drosophila_melanogaster
ENSHBUG00000003493	prpf3	99	72.439	ENSETEG00000019124	PRPF3	100	72.872	Echinops_telfairi
ENSHBUG00000003493	prpf3	100	61.238	ENSEBUG00000011680	prpf3	100	61.104	Eptatretus_burgeri
ENSHBUG00000003493	prpf3	99	72.294	ENSEASG00005001566	PRPF3	100	72.583	Equus_asinus_asinus
ENSHBUG00000003493	prpf3	99	72.439	ENSECAG00000019840	PRPF3	100	72.727	Equus_caballus
ENSHBUG00000003493	prpf3	84	72.398	ENSEEUG00000007338	PRPF3	85	72.172	Erinaceus_europaeus
ENSHBUG00000003493	prpf3	100	76.143	ENSELUG00000013624	prpf3	100	76.102	Esox_lucius
ENSHBUG00000003493	prpf3	99	72.439	ENSFCAG00000013940	PRPF3	100	72.727	Felis_catus
ENSHBUG00000003493	prpf3	99	72.399	ENSFDAG00000010365	PRPF3	100	72.872	Fukomys_damarensis
ENSHBUG00000003493	prpf3	100	87.936	ENSFHEG00000021746	prpf3	100	87.936	Fundulus_heteroclitus
ENSHBUG00000003493	prpf3	100	81.497	ENSGMOG00000008535	prpf3	100	81.497	Gadus_morhua
ENSHBUG00000003493	prpf3	99	73.266	ENSGALG00000028205	PRPF3	100	73.266	Gallus_gallus
ENSHBUG00000003493	prpf3	100	85.920	ENSGAFG00000012671	prpf3	100	85.920	Gambusia_affinis
ENSHBUG00000003493	prpf3	100	84.724	ENSGACG00000011792	prpf3	100	84.724	Gasterosteus_aculeatus
ENSHBUG00000003493	prpf3	99	72.832	ENSGAGG00000013765	PRPF3	100	75.315	Gopherus_agassizii
ENSHBUG00000003493	prpf3	85	77.059	ENSGGOG00000013174	PRPF3	100	76.765	Gorilla_gorilla
ENSHBUG00000003493	prpf3	99	72.583	ENSHGLG00000016569	PRPF3	100	72.872	Heterocephalus_glaber_female
ENSHBUG00000003493	prpf3	99	53.111	ENSHGLG00000016033	-	100	52.967	Heterocephalus_glaber_female
ENSHBUG00000003493	prpf3	99	72.583	ENSHGLG00100007590	PRPF3	100	72.872	Heterocephalus_glaber_male
ENSHBUG00000003493	prpf3	99	52.967	ENSHGLG00100008951	-	100	52.822	Heterocephalus_glaber_male
ENSHBUG00000003493	prpf3	100	81.259	ENSHCOG00000014058	prpf3	100	81.402	Hippocampus_comes
ENSHBUG00000003493	prpf3	100	82.000	ENSIPUG00000000902	PRPF3	100	81.429	Ictalurus_punctatus
ENSHBUG00000003493	prpf3	99	72.439	ENSSTOG00000001889	PRPF3	100	72.727	Ictidomys_tridecemlineatus
ENSHBUG00000003493	prpf3	100	86.667	ENSKMAG00000001390	prpf3	100	87.234	Kryptolebias_marmoratus
ENSHBUG00000003493	prpf3	100	87.836	ENSLBEG00000026310	prpf3	100	88.402	Labrus_bergylta
ENSHBUG00000003493	prpf3	93	68.210	ENSLACG00000010541	PRPF3	100	68.056	Latimeria_chalumnae
ENSHBUG00000003493	prpf3	99	72.254	ENSLAFG00000004713	PRPF3	100	72.727	Loxodonta_africana
ENSHBUG00000003493	prpf3	99	72.439	ENSMFAG00000039791	PRPF3	100	72.727	Macaca_fascicularis
ENSHBUG00000003493	prpf3	92	72.152	ENSMMUG00000016301	PRPF3	97	73.667	Macaca_mulatta
ENSHBUG00000003493	prpf3	99	72.439	ENSMNEG00000038161	PRPF3	100	72.727	Macaca_nemestrina
ENSHBUG00000003493	prpf3	98	48.980	ENSMLEG00000041065	-	97	48.834	Mandrillus_leucophaeus
ENSHBUG00000003493	prpf3	85	77.059	ENSMLEG00000040609	PRPF3	100	76.765	Mandrillus_leucophaeus
ENSHBUG00000003493	prpf3	100	87.607	ENSMAMG00000014968	prpf3	100	87.607	Mastacembelus_armatus
ENSHBUG00000003493	prpf3	100	95.763	ENSMZEG00005015970	prpf3	100	95.763	Maylandia_zebra
ENSHBUG00000003493	prpf3	99	73.266	ENSMGAG00000000707	PRPF3	100	73.266	Meleagris_gallopavo
ENSHBUG00000003493	prpf3	99	72.294	ENSMAUG00000017112	Prpf3	100	72.727	Mesocricetus_auratus
ENSHBUG00000003493	prpf3	99	72.439	ENSMICG00000015386	PRPF3	100	75.000	Microcebus_murinus
ENSHBUG00000003493	prpf3	99	72.439	ENSMOCG00000000242	Prpf3	100	72.727	Microtus_ochrogaster
ENSHBUG00000003493	prpf3	100	82.578	ENSMMOG00000016131	prpf3	100	83.286	Mola_mola
ENSHBUG00000003493	prpf3	99	72.399	ENSMODG00000018774	PRPF3	100	72.688	Monodelphis_domestica
ENSHBUG00000003493	prpf3	100	85.530	ENSMALG00000007257	prpf3	100	86.351	Monopterus_albus
ENSHBUG00000003493	prpf3	99	72.583	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.872	Mus_caroli
ENSHBUG00000003493	prpf3	99	72.583	ENSMUSG00000015748	Prpf3	100	72.872	Mus_musculus
ENSHBUG00000003493	prpf3	99	72.727	MGP_PahariEiJ_G0026798	Prpf3	100	73.016	Mus_pahari
ENSHBUG00000003493	prpf3	99	72.583	MGP_SPRETEiJ_G0026298	Prpf3	100	72.872	Mus_spretus
ENSHBUG00000003493	prpf3	99	70.809	ENSMPUG00000005080	PRPF3	100	71.098	Mustela_putorius_furo
ENSHBUG00000003493	prpf3	99	72.478	ENSMLUG00000004646	-	100	72.583	Myotis_lucifugus
ENSHBUG00000003493	prpf3	99	72.439	ENSNGAG00000000910	Prpf3	100	72.727	Nannospalax_galili
ENSHBUG00000003493	prpf3	100	95.921	ENSNBRG00000003462	prpf3	100	95.921	Neolamprologus_brichardi
ENSHBUG00000003493	prpf3	90	73.183	ENSNLEG00000009841	PRPF3	99	73.667	Nomascus_leucogenys
ENSHBUG00000003493	prpf3	83	64.103	ENSMEUG00000008733	PRPF3	89	65.385	Notamacropus_eugenii
ENSHBUG00000003493	prpf3	99	72.622	ENSOPRG00000010139	PRPF3	100	72.911	Ochotona_princeps
ENSHBUG00000003493	prpf3	99	54.298	ENSODEG00000014412	-	100	54.441	Octodon_degus
ENSHBUG00000003493	prpf3	99	72.583	ENSODEG00000011363	-	100	72.872	Octodon_degus
ENSHBUG00000003493	prpf3	100	95.056	ENSONIG00000006394	prpf3	100	95.056	Oreochromis_niloticus
ENSHBUG00000003493	prpf3	99	55.878	ENSOANG00000015441	PRPF3	100	55.878	Ornithorhynchus_anatinus
ENSHBUG00000003493	prpf3	99	72.439	ENSOCUG00000011760	PRPF3	100	72.727	Oryctolagus_cuniculus
ENSHBUG00000003493	prpf3	100	85.980	ENSORLG00000010330	prpf3	100	85.551	Oryzias_latipes
ENSHBUG00000003493	prpf3	100	85.980	ENSORLG00020009054	prpf3	100	85.551	Oryzias_latipes_hni
ENSHBUG00000003493	prpf3	100	85.980	ENSORLG00015015016	prpf3	100	85.551	Oryzias_latipes_hsok
ENSHBUG00000003493	prpf3	100	86.695	ENSOMEG00000000940	prpf3	100	86.695	Oryzias_melastigma
ENSHBUG00000003493	prpf3	99	68.588	ENSOGAG00000005352	PRPF3	100	68.876	Otolemur_garnettii
ENSHBUG00000003493	prpf3	99	72.439	ENSOARG00000020798	PRPF3	100	72.727	Ovis_aries
ENSHBUG00000003493	prpf3	98	55.653	ENSPPAG00000043769	-	99	55.066	Pan_paniscus
ENSHBUG00000003493	prpf3	99	72.294	ENSPPAG00000030983	PRPF3	100	72.583	Pan_paniscus
ENSHBUG00000003493	prpf3	99	72.439	ENSPPRG00000000731	PRPF3	100	72.727	Panthera_pardus
ENSHBUG00000003493	prpf3	99	72.439	ENSPTIG00000005516	PRPF3	100	72.727	Panthera_tigris_altaica
ENSHBUG00000003493	prpf3	99	72.439	ENSPTRG00000001254	PRPF3	100	72.727	Pan_troglodytes
ENSHBUG00000003493	prpf3	98	54.772	ENSPTRG00000047819	-	99	54.185	Pan_troglodytes
ENSHBUG00000003493	prpf3	99	72.294	ENSPANG00000000499	PRPF3	100	72.583	Papio_anubis
ENSHBUG00000003493	prpf3	100	81.250	ENSPKIG00000010501	prpf3	100	80.824	Paramormyrops_kingsleyae
ENSHBUG00000003493	prpf3	99	73.227	ENSPSIG00000014877	PRPF3	100	73.227	Pelodiscus_sinensis
ENSHBUG00000003493	prpf3	100	76.744	ENSPMGG00000007776	prpf3	100	76.453	Periophthalmus_magnuspinnatus
ENSHBUG00000003493	prpf3	99	72.439	ENSPEMG00000011672	Prpf3	100	72.727	Peromyscus_maniculatus_bairdii
ENSHBUG00000003493	prpf3	63	74.142	ENSPMAG00000005588	prpf3	99	72.788	Petromyzon_marinus
ENSHBUG00000003493	prpf3	99	72.399	ENSPCIG00000008795	PRPF3	100	72.688	Phascolarctos_cinereus
ENSHBUG00000003493	prpf3	100	86.182	ENSPFOG00000013638	prpf3	100	86.467	Poecilia_formosa
ENSHBUG00000003493	prpf3	100	86.638	ENSPLAG00000018103	prpf3	100	86.638	Poecilia_latipinna
ENSHBUG00000003493	prpf3	100	85.369	ENSPMEG00000023546	prpf3	100	86.638	Poecilia_mexicana
ENSHBUG00000003493	prpf3	100	86.207	ENSPREG00000017216	prpf3	100	86.207	Poecilia_reticulata
ENSHBUG00000003493	prpf3	76	63.027	ENSPPYG00000018646	-	99	63.602	Pongo_abelii
ENSHBUG00000003493	prpf3	93	71.473	ENSPPYG00000000900	PRPF3	99	71.783	Pongo_abelii
ENSHBUG00000003493	prpf3	85	74.660	ENSPCAG00000014908	PRPF3	85	75.000	Procavia_capensis
ENSHBUG00000003493	prpf3	99	72.294	ENSPCOG00000013828	PRPF3	100	72.583	Propithecus_coquereli
ENSHBUG00000003493	prpf3	99	72.190	ENSPVAG00000013472	PRPF3	100	72.478	Pteropus_vampyrus
ENSHBUG00000003493	prpf3	100	99.854	ENSPNYG00000004279	prpf3	100	99.854	Pundamilia_nyererei
ENSHBUG00000003493	prpf3	100	81.215	ENSPNAG00000001799	prpf3	100	80.650	Pygocentrus_nattereri
ENSHBUG00000003493	prpf3	99	72.727	ENSRNOG00000025629	Prpf3	100	73.016	Rattus_norvegicus
ENSHBUG00000003493	prpf3	83	70.213	ENSRBIG00000028854	PRPF3	98	69.504	Rhinopithecus_bieti
ENSHBUG00000003493	prpf3	99	72.439	ENSRROG00000027464	PRPF3	100	72.727	Rhinopithecus_roxellana
ENSHBUG00000003493	prpf3	99	65.945	ENSSBOG00000033104	PRPF3	100	66.234	Saimiri_boliviensis_boliviensis
ENSHBUG00000003493	prpf3	99	72.150	ENSSHAG00000009548	PRPF3	100	72.439	Sarcophilus_harrisii
ENSHBUG00000003493	prpf3	100	81.575	ENSSFOG00015022014	prpf3	100	81.013	Scleropages_formosus
ENSHBUG00000003493	prpf3	100	87.306	ENSSMAG00000015739	prpf3	100	87.306	Scophthalmus_maximus
ENSHBUG00000003493	prpf3	100	85.281	ENSSDUG00000006840	prpf3	100	86.003	Seriola_dumerili
ENSHBUG00000003493	prpf3	100	89.030	ENSSLDG00000015423	prpf3	100	89.451	Seriola_lalandi_dorsalis
ENSHBUG00000003493	prpf3	99	72.399	ENSSARG00000011064	PRPF3	100	72.688	Sorex_araneus
ENSHBUG00000003493	prpf3	99	72.365	ENSSPUG00000000809	PRPF3	100	72.507	Sphenodon_punctatus
ENSHBUG00000003493	prpf3	100	88.669	ENSSPAG00000018721	prpf3	100	89.235	Stegastes_partitus
ENSHBUG00000003493	prpf3	99	72.439	ENSSSCG00000030119	PRPF3	100	75.000	Sus_scrofa
ENSHBUG00000003493	prpf3	99	64.121	ENSTGUG00000004552	PRPF3	100	63.977	Taeniopygia_guttata
ENSHBUG00000003493	prpf3	100	83.406	ENSTRUG00000014923	prpf3	100	83.406	Takifugu_rubripes
ENSHBUG00000003493	prpf3	99	83.239	ENSTNIG00000008058	prpf3	100	82.955	Tetraodon_nigroviridis
ENSHBUG00000003493	prpf3	81	71.655	ENSTBEG00000014072	PRPF3	88	72.789	Tupaia_belangeri
ENSHBUG00000003493	prpf3	99	67.197	ENSTTRG00000010616	PRPF3	100	67.486	Tursiops_truncatus
ENSHBUG00000003493	prpf3	80	75.180	ENSUAMG00000009345	PRPF3	100	75.000	Ursus_americanus
ENSHBUG00000003493	prpf3	99	72.439	ENSUMAG00000003720	PRPF3	100	72.727	Ursus_maritimus
ENSHBUG00000003493	prpf3	88	76.871	ENSVPAG00000005425	PRPF3	89	76.923	Vicugna_pacos
ENSHBUG00000003493	prpf3	99	72.439	ENSVVUG00000007933	PRPF3	100	72.727	Vulpes_vulpes
ENSHBUG00000003493	prpf3	99	71.306	ENSXETG00000018654	prpf3	100	71.449	Xenopus_tropicalis
ENSHBUG00000003493	prpf3	100	86.638	ENSXMAG00000016347	prpf3	100	86.638	Xiphophorus_maculatus