EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000003552 (Gene tree)
Gene ID: 102307543
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC102307543
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 870 bases
Position: chrJH425416.1:823406-824275
Accession: 102307543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000022987	zf-CCCH	PF00642.24	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012247	-	778	XM_005928247	ENSHBUP00000022987	240 (aa)	XP_005928309	UPI0003BD214A

Gene Model

Click here to download ENSHBUG00000003552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003552	si:ch211-113e8.11	100	68.199	ENSAPOG00000010990	si:ch211-113e8.11	100	68.077	Acanthochromis_polyacanthus
ENSHBUG00000003552	si:ch211-113e8.11	81	71.066	ENSACIG00000011566	si:ch211-113e8.11	94	75.127	Amphilophus_citrinellus
ENSHBUG00000003552	si:ch211-113e8.11	100	67.442	ENSAOCG00000022156	si:ch211-113e8.11	100	66.279	Amphiprion_ocellaris
ENSHBUG00000003552	si:ch211-113e8.11	100	67.442	ENSAPEG00000018284	si:ch211-113e8.11	100	66.279	Amphiprion_percula
ENSHBUG00000003552	si:ch211-113e8.11	100	66.270	ENSATEG00000018391	si:ch211-113e8.11	100	64.286	Anabas_testudineus
ENSHBUG00000003552	si:ch211-113e8.11	100	97.083	ENSACLG00000017011	si:ch211-113e8.11	100	97.083	Astatotilapia_calliptera
ENSHBUG00000003552	si:ch211-113e8.11	97	44.286	ENSAMXG00000000733	si:ch211-113e8.11	97	50.385	Astyanax_mexicanus
ENSHBUG00000003552	si:ch211-113e8.11	99	60.938	ENSCSEG00000004538	si:ch211-113e8.11	99	58.755	Cynoglossus_semilaevis
ENSHBUG00000003552	si:ch211-113e8.11	100	59.200	ENSCVAG00000020156	si:ch211-113e8.11	99	58.964	Cyprinodon_variegatus
ENSHBUG00000003552	si:ch211-113e8.11	95	46.957	ENSDARG00000076585	si:ch211-113e8.11	97	50.215	Danio_rerio
ENSHBUG00000003552	si:ch211-113e8.11	60	31.447	FBgn0259728	CG42382	76	30.818	Drosophila_melanogaster
ENSHBUG00000003552	si:ch211-113e8.11	100	54.198	ENSELUG00000001130	si:ch211-113e8.11	100	52.672	Esox_lucius
ENSHBUG00000003552	si:ch211-113e8.11	100	60.000	ENSFHEG00000007870	si:ch211-113e8.11	99	58.333	Fundulus_heteroclitus
ENSHBUG00000003552	si:ch211-113e8.11	100	63.306	ENSGAFG00000020570	si:ch211-113e8.11	100	63.306	Gambusia_affinis
ENSHBUG00000003552	si:ch211-113e8.11	99	54.472	ENSHCOG00000002041	si:ch211-113e8.11	99	54.472	Hippocampus_comes
ENSHBUG00000003552	si:ch211-113e8.11	95	49.587	ENSIPUG00000002260	si:ch211-113e8.11	93	49.174	Ictalurus_punctatus
ENSHBUG00000003552	si:ch211-113e8.11	100	62.800	ENSKMAG00000000086	si:ch211-113e8.11	99	61.600	Kryptolebias_marmoratus
ENSHBUG00000003552	si:ch211-113e8.11	100	55.970	ENSLBEG00000008353	si:ch211-113e8.11	100	55.805	Labrus_bergylta
ENSHBUG00000003552	si:ch211-113e8.11	73	41.808	ENSLACG00000004304	si:ch211-113e8.11	77	43.226	Latimeria_chalumnae
ENSHBUG00000003552	si:ch211-113e8.11	86	62.832	ENSMAMG00000019098	si:ch211-113e8.11	96	60.084	Mastacembelus_armatus
ENSHBUG00000003552	si:ch211-113e8.11	100	93.750	ENSMZEG00005023658	si:ch211-113e8.11	100	93.750	Maylandia_zebra
ENSHBUG00000003552	si:ch211-113e8.11	100	55.285	ENSMMOG00000007254	si:ch211-113e8.11	100	53.909	Mola_mola
ENSHBUG00000003552	si:ch211-113e8.11	100	62.069	ENSMALG00000005110	si:ch211-113e8.11	100	58.846	Monopterus_albus
ENSHBUG00000003552	si:ch211-113e8.11	100	97.083	ENSNBRG00000015060	si:ch211-113e8.11	100	97.083	Neolamprologus_brichardi
ENSHBUG00000003552	si:ch211-113e8.11	100	59.839	ENSORLG00000023699	si:ch211-113e8.11	100	58.635	Oryzias_latipes
ENSHBUG00000003552	si:ch211-113e8.11	100	59.600	ENSORLG00020022094	si:ch211-113e8.11	100	58.800	Oryzias_latipes_hni
ENSHBUG00000003552	si:ch211-113e8.11	100	58.893	ENSORLG00015002588	si:ch211-113e8.11	100	57.708	Oryzias_latipes_hsok
ENSHBUG00000003552	si:ch211-113e8.11	100	59.600	ENSOMEG00000010624	si:ch211-113e8.11	100	59.200	Oryzias_melastigma
ENSHBUG00000003552	si:ch211-113e8.11	56	53.521	ENSPKIG00000023576	si:ch211-113e8.11	61	51.299	Paramormyrops_kingsleyae
ENSHBUG00000003552	si:ch211-113e8.11	96	54.783	ENSPMGG00000018547	si:ch211-113e8.11	97	53.913	Periophthalmus_magnuspinnatus
ENSHBUG00000003552	si:ch211-113e8.11	98	64.876	ENSPFOG00000007950	si:ch211-113e8.11	100	64.050	Poecilia_formosa
ENSHBUG00000003552	si:ch211-113e8.11	100	65.323	ENSPLAG00000002081	si:ch211-113e8.11	100	64.919	Poecilia_latipinna
ENSHBUG00000003552	si:ch211-113e8.11	100	65.323	ENSPMEG00000017505	si:ch211-113e8.11	100	64.516	Poecilia_mexicana
ENSHBUG00000003552	si:ch211-113e8.11	100	67.490	ENSPREG00000008530	si:ch211-113e8.11	100	67.078	Poecilia_reticulata
ENSHBUG00000003552	si:ch211-113e8.11	100	97.500	ENSPNYG00000022856	si:ch211-113e8.11	100	97.500	Pundamilia_nyererei
ENSHBUG00000003552	si:ch211-113e8.11	98	43.359	ENSPNAG00000013782	si:ch211-113e8.11	68	50.575	Pygocentrus_nattereri
ENSHBUG00000003552	si:ch211-113e8.11	97	47.200	ENSSFOG00015000959	si:ch211-113e8.11	97	47.368	Scleropages_formosus
ENSHBUG00000003552	si:ch211-113e8.11	100	66.265	ENSSMAG00000009732	si:ch211-113e8.11	100	65.060	Scophthalmus_maximus
ENSHBUG00000003552	si:ch211-113e8.11	100	68.627	ENSSDUG00000000112	si:ch211-113e8.11	100	68.235	Seriola_dumerili
ENSHBUG00000003552	si:ch211-113e8.11	100	69.020	ENSSLDG00000003287	si:ch211-113e8.11	100	69.412	Seriola_lalandi_dorsalis
ENSHBUG00000003552	si:ch211-113e8.11	100	67.315	ENSSPAG00000001375	si:ch211-113e8.11	100	67.704	Stegastes_partitus
ENSHBUG00000003552	si:ch211-113e8.11	99	55.691	ENSTRUG00000023898	si:ch211-113e8.11	99	54.065	Takifugu_rubripes
ENSHBUG00000003552	si:ch211-113e8.11	100	63.306	ENSXMAG00000024104	si:ch211-113e8.11	100	62.903	Xiphophorus_maculatus