EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000003554 (Gene tree)
Gene ID: 102307674
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 35606 bases
Position: chrJH425467.1:868884-904489
Accession: 102307674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000002350	TUDOR	PF00567.24	3.9e-80	1	5
ENSHBUP00000002350	TUDOR	PF00567.24	3.9e-80	2	5
ENSHBUP00000002350	TUDOR	PF00567.24	3.9e-80	3	5
ENSHBUP00000002350	TUDOR	PF00567.24	3.9e-80	4	5
ENSHBUP00000002350	TUDOR	PF00567.24	3.9e-80	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012256	-	8129	XM_005932543	ENSHBUP00000002350	1593 (aa)	XP_005932605	UPI0003BD23C1

Gene Model

Click here to download ENSHBUG00000003554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003554	rnf17	87	33.977	ENSG00000132972	RNF17	98	35.286	Homo_sapiens
ENSHBUG00000003554	rnf17	90	67.008	ENSAPOG00000017034	rnf17	97	67.008	Acanthochromis_polyacanthus
ENSHBUG00000003554	rnf17	98	31.152	ENSAMEG00000017340	RNF17	97	31.193	Ailuropoda_melanoleuca
ENSHBUG00000003554	rnf17	100	72.260	ENSAOCG00000018283	rnf17	100	72.260	Amphiprion_ocellaris
ENSHBUG00000003554	rnf17	89	67.347	ENSAPEG00000022338	rnf17	96	67.347	Amphiprion_percula
ENSHBUG00000003554	rnf17	90	65.908	ENSATEG00000002067	rnf17	99	65.977	Anabas_testudineus
ENSHBUG00000003554	rnf17	88	30.900	ENSAPLG00000003969	RNF17	99	31.037	Anas_platyrhynchos
ENSHBUG00000003554	rnf17	92	31.638	ENSACAG00000001418	RNF17	77	34.283	Anolis_carolinensis
ENSHBUG00000003554	rnf17	100	98.745	ENSACLG00000018279	rnf17	100	98.745	Astatotilapia_calliptera
ENSHBUG00000003554	rnf17	91	47.679	ENSAMXG00000011002	rnf17	100	46.886	Astyanax_mexicanus
ENSHBUG00000003554	rnf17	55	35.757	ENSBTAG00000000278	RNF17	98	35.757	Bos_taurus
ENSHBUG00000003554	rnf17	74	34.486	ENSCJAG00000018937	RNF17	98	36.095	Callithrix_jacchus
ENSHBUG00000003554	rnf17	96	31.722	ENSCAFG00000007418	RNF17	97	31.933	Canis_familiaris
ENSHBUG00000003554	rnf17	75	34.480	ENSCHIG00000026716	RNF17	98	36.296	Capra_hircus
ENSHBUG00000003554	rnf17	98	30.947	ENSTSYG00000000365	RNF17	98	35.546	Carlito_syrichta
ENSHBUG00000003554	rnf17	87	34.519	ENSCCAG00000026725	RNF17	98	35.598	Cebus_capucinus
ENSHBUG00000003554	rnf17	98	30.332	ENSCATG00000040352	RNF17	98	34.993	Cercocebus_atys
ENSHBUG00000003554	rnf17	98	31.676	ENSCLAG00000004127	RNF17	97	31.288	Chinchilla_lanigera
ENSHBUG00000003554	rnf17	98	30.537	ENSCSAG00000018019	RNF17	88	33.844	Chlorocebus_sabaeus
ENSHBUG00000003554	rnf17	52	45.926	ENSCHOG00000013310	RNF17	55	45.926	Choloepus_hoffmanni
ENSHBUG00000003554	rnf17	94	31.899	ENSCPBG00000020920	RNF17	98	31.911	Chrysemys_picta_bellii
ENSHBUG00000003554	rnf17	98	30.700	ENSCANG00000032927	RNF17	98	35.139	Colobus_angolensis_palliatus
ENSHBUG00000003554	rnf17	90	35.061	ENSCGRG00001022658	Rnf17	91	34.688	Cricetulus_griseus_chok1gshd
ENSHBUG00000003554	rnf17	90	35.061	ENSCGRG00000009924	Rnf17	91	34.688	Cricetulus_griseus_crigri
ENSHBUG00000003554	rnf17	95	56.124	ENSCSEG00000008626	rnf17	99	55.872	Cynoglossus_semilaevis
ENSHBUG00000003554	rnf17	80	58.564	ENSCVAG00000017008	rnf17	94	58.564	Cyprinodon_variegatus
ENSHBUG00000003554	rnf17	99	43.413	ENSDARG00000056387	rnf17	99	43.484	Danio_rerio
ENSHBUG00000003554	rnf17	98	30.600	ENSDNOG00000006115	RNF17	97	30.477	Dasypus_novemcinctus
ENSHBUG00000003554	rnf17	55	34.947	ENSEASG00005001421	-	98	41.096	Equus_asinus_asinus
ENSHBUG00000003554	rnf17	98	31.763	ENSECAG00000017152	RNF17	96	31.976	Equus_caballus
ENSHBUG00000003554	rnf17	99	48.592	ENSELUG00000005626	rnf17	99	48.422	Esox_lucius
ENSHBUG00000003554	rnf17	90	35.304	ENSFCAG00000004914	RNF17	98	36.148	Felis_catus
ENSHBUG00000003554	rnf17	74	33.197	ENSFALG00000008766	RNF17	79	33.197	Ficedula_albicollis
ENSHBUG00000003554	rnf17	88	33.630	ENSFDAG00000017857	RNF17	90	33.412	Fukomys_damarensis
ENSHBUG00000003554	rnf17	100	62.179	ENSFHEG00000014822	rnf17	99	62.242	Fundulus_heteroclitus
ENSHBUG00000003554	rnf17	58	47.977	ENSGMOG00000015560	-	100	47.977	Gadus_morhua
ENSHBUG00000003554	rnf17	81	75.439	ENSGAFG00000004463	rnf17	96	75.439	Gambusia_affinis
ENSHBUG00000003554	rnf17	93	30.881	ENSGAGG00000016999	RNF17	91	30.239	Gopherus_agassizii
ENSHBUG00000003554	rnf17	98	30.737	ENSGGOG00000014491	RNF17	98	35.139	Gorilla_gorilla
ENSHBUG00000003554	rnf17	74	34.684	ENSHGLG00000007270	RNF17	97	30.615	Heterocephalus_glaber_female
ENSHBUG00000003554	rnf17	74	34.603	ENSHGLG00100017393	RNF17	97	30.859	Heterocephalus_glaber_male
ENSHBUG00000003554	rnf17	79	50.000	ENSHCOG00000017676	rnf17	93	50.000	Hippocampus_comes
ENSHBUG00000003554	rnf17	86	49.577	ENSIPUG00000001087	rnf17	92	49.577	Ictalurus_punctatus
ENSHBUG00000003554	rnf17	50	33.531	ENSSTOG00000011255	-	98	33.828	Ictidomys_tridecemlineatus
ENSHBUG00000003554	rnf17	98	32.017	ENSJJAG00000016584	Rnf17	76	34.840	Jaculus_jaculus
ENSHBUG00000003554	rnf17	100	67.475	ENSKMAG00000013403	rnf17	99	67.662	Kryptolebias_marmoratus
ENSHBUG00000003554	rnf17	90	61.213	ENSLBEG00000014910	rnf17	96	61.213	Labrus_bergylta
ENSHBUG00000003554	rnf17	70	31.588	ENSLACG00000000323	RNF17	81	35.032	Latimeria_chalumnae
ENSHBUG00000003554	rnf17	99	37.285	ENSLOCG00000010768	rnf17	99	37.010	Lepisosteus_oculatus
ENSHBUG00000003554	rnf17	98	30.760	ENSMFAG00000032388	RNF17	98	35.139	Macaca_fascicularis
ENSHBUG00000003554	rnf17	98	30.760	ENSMMUG00000014610	RNF17	98	35.139	Macaca_mulatta
ENSHBUG00000003554	rnf17	98	30.760	ENSMNEG00000011234	RNF17	98	35.139	Macaca_nemestrina
ENSHBUG00000003554	rnf17	98	30.616	ENSMLEG00000030227	RNF17	97	30.616	Mandrillus_leucophaeus
ENSHBUG00000003554	rnf17	87	67.901	ENSMAMG00000020403	rnf17	98	67.901	Mastacembelus_armatus
ENSHBUG00000003554	rnf17	100	98.870	ENSMZEG00005019166	rnf17	100	98.870	Maylandia_zebra
ENSHBUG00000003554	rnf17	77	31.469	ENSMGAG00000015138	RNF17	99	31.469	Meleagris_gallopavo
ENSHBUG00000003554	rnf17	88	34.541	ENSMAUG00000004788	Rnf17	90	34.059	Mesocricetus_auratus
ENSHBUG00000003554	rnf17	98	30.829	ENSMICG00000010364	RNF17	99	34.921	Microcebus_murinus
ENSHBUG00000003554	rnf17	60	35.084	ENSMOCG00000011818	-	99	35.084	Microtus_ochrogaster
ENSHBUG00000003554	rnf17	87	60.947	ENSMMOG00000019514	rnf17	98	60.947	Mola_mola
ENSHBUG00000003554	rnf17	98	31.843	ENSMODG00000007827	RNF17	96	31.921	Monodelphis_domestica
ENSHBUG00000003554	rnf17	89	60.401	ENSMALG00000016943	rnf17	99	59.807	Monopterus_albus
ENSHBUG00000003554	rnf17	74	34.472	MGP_CAROLIEiJ_G0019337	Rnf17	76	34.066	Mus_caroli
ENSHBUG00000003554	rnf17	90	34.553	ENSMUSG00000000365	Rnf17	91	34.144	Mus_musculus
ENSHBUG00000003554	rnf17	88	34.395	MGP_PahariEiJ_G0030355	Rnf17	97	30.977	Mus_pahari
ENSHBUG00000003554	rnf17	90	34.797	MGP_SPRETEiJ_G0020228	Rnf17	91	34.380	Mus_spretus
ENSHBUG00000003554	rnf17	98	31.345	ENSMPUG00000013305	RNF17	97	31.212	Mustela_putorius_furo
ENSHBUG00000003554	rnf17	98	30.456	ENSMLUG00000003903	RNF17	97	30.923	Myotis_lucifugus
ENSHBUG00000003554	rnf17	98	31.937	ENSNGAG00000013553	Rnf17	97	31.896	Nannospalax_galili
ENSHBUG00000003554	rnf17	80	82.436	ENSNBRG00000012006	rnf17	96	82.436	Neolamprologus_brichardi
ENSHBUG00000003554	rnf17	98	30.490	ENSNLEG00000013780	RNF17	98	34.808	Nomascus_leucogenys
ENSHBUG00000003554	rnf17	100	95.543	ENSONIG00000015746	rnf17	100	95.543	Oreochromis_niloticus
ENSHBUG00000003554	rnf17	98	30.891	ENSOCUG00000007384	RNF17	97	30.703	Oryctolagus_cuniculus
ENSHBUG00000003554	rnf17	89	56.641	ENSORLG00000012818	rnf17	99	56.430	Oryzias_latipes
ENSHBUG00000003554	rnf17	100	56.145	ENSORLG00020009879	-	100	56.164	Oryzias_latipes_hni
ENSHBUG00000003554	rnf17	99	56.117	ENSORLG00015013027	-	99	55.950	Oryzias_latipes_hsok
ENSHBUG00000003554	rnf17	76	61.345	ENSOMEG00000009891	rnf17	97	60.976	Oryzias_melastigma
ENSHBUG00000003554	rnf17	98	30.628	ENSOGAG00000014803	RNF17	97	31.045	Otolemur_garnettii
ENSHBUG00000003554	rnf17	98	31.601	ENSOARG00000014641	RNF17	99	31.782	Ovis_aries
ENSHBUG00000003554	rnf17	77	33.411	ENSPPAG00000028779	RNF17	98	35.147	Pan_paniscus
ENSHBUG00000003554	rnf17	89	35.251	ENSPPRG00000009230	RNF17	98	39.706	Panthera_pardus
ENSHBUG00000003554	rnf17	89	35.251	ENSPTIG00000001738	RNF17	98	39.706	Panthera_tigris_altaica
ENSHBUG00000003554	rnf17	87	33.898	ENSPTRG00000005713	RNF17	98	35.147	Pan_troglodytes
ENSHBUG00000003554	rnf17	98	30.556	ENSPANG00000007640	RNF17	98	34.993	Papio_anubis
ENSHBUG00000003554	rnf17	79	43.804	ENSPKIG00000001648	rnf17	93	44.578	Paramormyrops_kingsleyae
ENSHBUG00000003554	rnf17	74	36.039	ENSPSIG00000011245	RNF17	99	36.519	Pelodiscus_sinensis
ENSHBUG00000003554	rnf17	90	34.846	ENSPEMG00000008693	Rnf17	91	34.351	Peromyscus_maniculatus_bairdii
ENSHBUG00000003554	rnf17	69	33.736	ENSPCIG00000009190	-	91	33.929	Phascolarctos_cinereus
ENSHBUG00000003554	rnf17	100	64.198	ENSPFOG00000007124	rnf17	100	64.400	Poecilia_formosa
ENSHBUG00000003554	rnf17	100	65.481	ENSPLAG00000006198	rnf17	99	65.625	Poecilia_latipinna
ENSHBUG00000003554	rnf17	100	65.481	ENSPMEG00000022432	rnf17	99	65.625	Poecilia_mexicana
ENSHBUG00000003554	rnf17	81	69.841	ENSPREG00000001414	rnf17	92	69.841	Poecilia_reticulata
ENSHBUG00000003554	rnf17	98	30.456	ENSPPYG00000005215	RNF17	88	33.816	Pongo_abelii
ENSHBUG00000003554	rnf17	61	37.923	ENSPCAG00000002665	RNF17	65	37.923	Procavia_capensis
ENSHBUG00000003554	rnf17	71	47.794	ENSPVAG00000013021	RNF17	73	47.794	Pteropus_vampyrus
ENSHBUG00000003554	rnf17	86	56.463	ENSPNAG00000027505	rnf17	99	51.392	Pygocentrus_nattereri
ENSHBUG00000003554	rnf17	98	31.106	ENSRNOG00000008059	Rnf17	97	31.013	Rattus_norvegicus
ENSHBUG00000003554	rnf17	77	32.291	ENSRBIG00000027010	RNF17	97	30.398	Rhinopithecus_bieti
ENSHBUG00000003554	rnf17	98	30.718	ENSRROG00000022801	RNF17	98	35.337	Rhinopithecus_roxellana
ENSHBUG00000003554	rnf17	87	34.594	ENSSBOG00000021661	RNF17	98	35.924	Saimiri_boliviensis_boliviensis
ENSHBUG00000003554	rnf17	98	31.669	ENSSHAG00000005609	RNF17	97	31.701	Sarcophilus_harrisii
ENSHBUG00000003554	rnf17	74	43.570	ENSSFOG00015023037	rnf17	89	43.570	Scleropages_formosus
ENSHBUG00000003554	rnf17	91	61.216	ENSSMAG00000007429	rnf17	98	61.122	Scophthalmus_maximus
ENSHBUG00000003554	rnf17	90	68.104	ENSSDUG00000013530	rnf17	100	68.104	Seriola_dumerili
ENSHBUG00000003554	rnf17	91	69.444	ENSSLDG00000019577	rnf17	99	69.444	Seriola_lalandi_dorsalis
ENSHBUG00000003554	rnf17	70	34.234	ENSSARG00000003016	RNF17	63	34.234	Sorex_araneus
ENSHBUG00000003554	rnf17	76	33.633	ENSSPUG00000008917	RNF17	82	33.997	Sphenodon_punctatus
ENSHBUG00000003554	rnf17	89	66.643	ENSSPAG00000001925	rnf17	99	66.713	Stegastes_partitus
ENSHBUG00000003554	rnf17	99	30.160	ENSSSCG00000009572	RNF17	98	30.728	Sus_scrofa
ENSHBUG00000003554	rnf17	58	33.098	ENSTGUG00000011267	-	100	33.098	Taeniopygia_guttata
ENSHBUG00000003554	rnf17	99	51.309	ENSTRUG00000015498	rnf17	99	51.309	Takifugu_rubripes
ENSHBUG00000003554	rnf17	74	54.149	ENSTNIG00000015681	rnf17	99	54.149	Tetraodon_nigroviridis
ENSHBUG00000003554	rnf17	81	40.417	ENSTBEG00000000282	RNF17	74	40.417	Tupaia_belangeri
ENSHBUG00000003554	rnf17	50	41.627	ENSUMAG00000013953	-	98	39.706	Ursus_maritimus
ENSHBUG00000003554	rnf17	84	45.070	ENSVPAG00000011388	RNF17	78	45.070	Vicugna_pacos
ENSHBUG00000003554	rnf17	98	31.563	ENSVVUG00000006226	RNF17	97	31.563	Vulpes_vulpes
ENSHBUG00000003554	rnf17	70	31.933	ENSXETG00000034020	RNF17	99	40.441	Xenopus_tropicalis
ENSHBUG00000003554	rnf17	90	60.163	ENSXCOG00000018295	rnf17	99	61.168	Xiphophorus_couchianus
ENSHBUG00000003554	rnf17	90	61.986	ENSXMAG00000014747	rnf17	99	62.466	Xiphophorus_maculatus