EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003665 (Gene tree)
Gene ID: 102299886
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9088 bases
Position: chrJH425399.1:1215419-1224506
Accession: 102299886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023066	RRM_5	PF13893.6	1.1e-10	1	2
ENSHBUP00000023066	RRM_5	PF13893.6	1.1e-10	2	2
ENSHBUP00000002457	RRM_5	PF13893.6	1.2e-10	1	2
ENSHBUP00000002457	RRM_5	PF13893.6	1.2e-10	2	2
ENSHBUP00000023066	RRM_1	PF00076.22	3e-33	1	2
ENSHBUP00000023066	RRM_1	PF00076.22	3e-33	2	2
ENSHBUP00000002457	RRM_1	PF00076.22	3.5e-33	1	2
ENSHBUP00000002457	RRM_1	PF00076.22	3.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000012060	-	2608	XM_005926372	ENSHBUP00000002457	565 (aa)	XP_005926434	-
ENSHBUT00000012056	-	1617	-	ENSHBUP00000023066	538 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000003665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003665	-	52	61.871	ENSHBUG00000016754	rbm14b	64	62.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003665	-	96	91.439	ENSAPOG00000003380	-	99	91.439	Acanthochromis_polyacanthus
ENSHBUG00000003665	-	74	60.204	ENSAPOG00000021712	rbm14b	68	61.268	Acanthochromis_polyacanthus
ENSHBUG00000003665	-	96	92.870	ENSACIG00000021173	-	99	92.870	Amphilophus_citrinellus
ENSHBUG00000003665	-	71	61.871	ENSACIG00000000381	rbm14b	65	62.094	Amphilophus_citrinellus
ENSHBUG00000003665	-	97	90.381	ENSAOCG00000001659	-	100	90.200	Amphiprion_ocellaris
ENSHBUG00000003665	-	74	60.204	ENSAOCG00000008941	rbm14b	82	56.000	Amphiprion_ocellaris
ENSHBUG00000003665	-	74	60.204	ENSAPEG00000003161	rbm14b	82	55.164	Amphiprion_percula
ENSHBUG00000003665	-	96	91.423	ENSAPEG00000016988	-	99	91.241	Amphiprion_percula
ENSHBUG00000003665	-	69	58.400	ENSATEG00000003034	rbm14b	78	57.214	Anabas_testudineus
ENSHBUG00000003665	-	98	88.158	ENSATEG00000009700	-	98	87.782	Anabas_testudineus
ENSHBUG00000003665	-	52	61.871	ENSACLG00000014355	rbm14b	64	62.094	Astatotilapia_calliptera
ENSHBUG00000003665	-	100	100.000	ENSACLG00000009112	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000003665	-	73	60.546	ENSAMXG00000007233	rbm14a	82	60.349	Astyanax_mexicanus
ENSHBUG00000003665	-	65	59.740	ENSAMXG00000031225	rbm14b	67	60.949	Astyanax_mexicanus
ENSHBUG00000003665	-	97	83.696	ENSCSEG00000019690	-	100	83.152	Cynoglossus_semilaevis
ENSHBUG00000003665	-	69	53.753	ENSCSEG00000000357	rbm14b	80	51.927	Cynoglossus_semilaevis
ENSHBUG00000003665	-	75	47.746	ENSCVAG00000013776	rbm14b	66	61.620	Cyprinodon_variegatus
ENSHBUG00000003665	-	97	86.604	ENSCVAG00000014858	-	100	85.842	Cyprinodon_variegatus
ENSHBUG00000003665	-	67	60.364	ENSDARG00000103834	rbm14b	64	61.091	Danio_rerio
ENSHBUG00000003665	-	73	59.949	ENSDARG00000012723	rbm14a	80	60.000	Danio_rerio
ENSHBUG00000003665	-	88	57.430	ENSELUG00000023633	rbm14a	81	58.353	Esox_lucius
ENSHBUG00000003665	-	67	62.500	ENSELUG00000004690	rbm14b	70	62.455	Esox_lucius
ENSHBUG00000003665	-	97	84.586	ENSFHEG00000020913	-	100	85.019	Fundulus_heteroclitus
ENSHBUG00000003665	-	55	60.959	ENSFHEG00000021265	rbm14b	65	61.620	Fundulus_heteroclitus
ENSHBUG00000003665	-	71	79.427	ENSGMOG00000010840	-	78	78.906	Gadus_morhua
ENSHBUG00000003665	-	97	86.122	ENSGAFG00000004455	-	100	86.148	Gambusia_affinis
ENSHBUG00000003665	-	71	61.511	ENSGAFG00000001924	rbm14b	66	60.915	Gambusia_affinis
ENSHBUG00000003665	-	97	77.920	ENSGACG00000020440	-	95	87.041	Gasterosteus_aculeatus
ENSHBUG00000003665	-	97	77.095	ENSHCOG00000004071	-	100	77.052	Hippocampus_comes
ENSHBUG00000003665	-	77	52.778	ENSHCOG00000012571	rbm14b	99	67.296	Hippocampus_comes
ENSHBUG00000003665	-	66	61.039	ENSIPUG00000009089	rbm14b	67	61.679	Ictalurus_punctatus
ENSHBUG00000003665	-	74	55.263	ENSIPUG00000021256	rbm14a	83	55.156	Ictalurus_punctatus
ENSHBUG00000003665	-	96	86.154	ENSKMAG00000008514	-	99	85.385	Kryptolebias_marmoratus
ENSHBUG00000003665	-	52	61.511	ENSKMAG00000020444	rbm14b	65	60.915	Kryptolebias_marmoratus
ENSHBUG00000003665	-	52	62.319	ENSLBEG00000027934	rbm14b	60	62.094	Labrus_bergylta
ENSHBUG00000003665	-	97	86.413	ENSLBEG00000001217	-	100	86.232	Labrus_bergylta
ENSHBUG00000003665	-	70	60.140	ENSMAMG00000014394	rbm14b	63	60.140	Mastacembelus_armatus
ENSHBUG00000003665	-	97	88.649	ENSMAMG00000021313	-	100	88.468	Mastacembelus_armatus
ENSHBUG00000003665	-	52	61.871	ENSMZEG00005020834	rbm14b	65	62.094	Maylandia_zebra
ENSHBUG00000003665	-	97	100.000	ENSMZEG00005001201	-	100	100.000	Maylandia_zebra
ENSHBUG00000003665	-	71	57.246	ENSMMOG00000012912	rbm14b	69	57.040	Mola_mola
ENSHBUG00000003665	-	97	81.967	ENSMMOG00000014501	-	100	84.364	Mola_mola
ENSHBUG00000003665	-	69	56.117	ENSMALG00000015445	rbm14b	85	55.897	Monopterus_albus
ENSHBUG00000003665	-	52	61.871	ENSNBRG00000003378	rbm14b	65	62.094	Neolamprologus_brichardi
ENSHBUG00000003665	-	97	99.086	ENSNBRG00000004960	-	99	99.086	Neolamprologus_brichardi
ENSHBUG00000003665	-	69	58.021	ENSONIG00000013035	rbm14b	82	57.214	Oreochromis_niloticus
ENSHBUG00000003665	-	86	96.368	ENSONIG00000008557	-	95	96.368	Oreochromis_niloticus
ENSHBUG00000003665	-	98	86.380	ENSORLG00000001900	-	100	87.048	Oryzias_latipes
ENSHBUG00000003665	-	75	48.447	ENSORLG00000008051	rbm14b	82	48.548	Oryzias_latipes
ENSHBUG00000003665	-	98	86.380	ENSORLG00020019144	-	100	87.048	Oryzias_latipes_hni
ENSHBUG00000003665	-	74	47.764	ENSORLG00020005551	rbm14b	82	47.764	Oryzias_latipes_hni
ENSHBUG00000003665	-	97	86.594	ENSORLG00015000082	-	100	87.138	Oryzias_latipes_hsok
ENSHBUG00000003665	-	75	48.240	ENSORLG00015022683	rbm14b	82	48.340	Oryzias_latipes_hsok
ENSHBUG00000003665	-	73	52.926	ENSOMEG00000000910	rbm14b	78	56.030	Oryzias_melastigma
ENSHBUG00000003665	-	77	88.554	ENSOMEG00000006508	-	96	94.000	Oryzias_melastigma
ENSHBUG00000003665	-	73	50.109	ENSPKIG00000009078	rbm14b	89	50.000	Paramormyrops_kingsleyae
ENSHBUG00000003665	-	80	78.190	ENSPMGG00000018869	-	93	86.486	Periophthalmus_magnuspinnatus
ENSHBUG00000003665	-	74	60.204	ENSPMGG00000013064	rbm14b	66	61.053	Periophthalmus_magnuspinnatus
ENSHBUG00000003665	-	97	86.338	ENSPFOG00000004843	-	100	86.174	Poecilia_formosa
ENSHBUG00000003665	-	75	47.412	ENSPFOG00000003614	rbm14b	66	61.268	Poecilia_formosa
ENSHBUG00000003665	-	71	61.511	ENSPLAG00000001395	rbm14b	66	60.915	Poecilia_latipinna
ENSHBUG00000003665	-	97	86.338	ENSPLAG00000017359	-	100	86.174	Poecilia_latipinna
ENSHBUG00000003665	-	97	86.643	ENSPMEG00000004894	-	100	86.486	Poecilia_mexicana
ENSHBUG00000003665	-	55	60.204	ENSPMEG00000012911	rbm14b	66	61.268	Poecilia_mexicana
ENSHBUG00000003665	-	99	86.059	ENSPREG00000007274	-	100	86.174	Poecilia_reticulata
ENSHBUG00000003665	-	52	61.871	ENSPREG00000003013	rbm14b	66	61.268	Poecilia_reticulata
ENSHBUG00000003665	-	52	61.871	ENSPNYG00000023605	rbm14b	65	62.094	Pundamilia_nyererei
ENSHBUG00000003665	-	97	100.000	ENSPNYG00000015906	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000003665	-	75	56.818	ENSPNAG00000012473	rbm14a	87	56.818	Pygocentrus_nattereri
ENSHBUG00000003665	-	67	59.740	ENSPNAG00000001977	rbm14b	65	61.314	Pygocentrus_nattereri
ENSHBUG00000003665	-	73	50.110	ENSSFOG00015023796	rbm14b	68	61.455	Scleropages_formosus
ENSHBUG00000003665	-	97	87.978	ENSSMAG00000002055	-	100	89.071	Scophthalmus_maximus
ENSHBUG00000003665	-	66	62.950	ENSSMAG00000004522	rbm14b	67	63.768	Scophthalmus_maximus
ENSHBUG00000003665	-	97	90.991	ENSSDUG00000020756	-	100	91.532	Seriola_dumerili
ENSHBUG00000003665	-	71	61.871	ENSSDUG00000007975	rbm14b	65	62.094	Seriola_dumerili
ENSHBUG00000003665	-	97	90.143	ENSSLDG00000006311	-	100	91.039	Seriola_lalandi_dorsalis
ENSHBUG00000003665	-	71	61.871	ENSSLDG00000006472	rbm14b	65	62.094	Seriola_lalandi_dorsalis
ENSHBUG00000003665	-	71	61.871	ENSSPAG00000004231	rbm14b	64	62.094	Stegastes_partitus
ENSHBUG00000003665	-	98	90.943	ENSSPAG00000010825	-	99	91.058	Stegastes_partitus
ENSHBUG00000003665	-	97	78.977	ENSTRUG00000009504	-	94	78.598	Takifugu_rubripes
ENSHBUG00000003665	-	71	61.268	ENSTRUG00000005716	rbm14b	66	61.268	Takifugu_rubripes
ENSHBUG00000003665	-	97	67.514	ENSTNIG00000000058	-	95	75.699	Tetraodon_nigroviridis
ENSHBUG00000003665	-	69	53.476	ENSTNIG00000006844	rbm14b	79	53.117	Tetraodon_nigroviridis
ENSHBUG00000003665	-	99	84.708	ENSXCOG00000006825	-	99	84.337	Xiphophorus_couchianus
ENSHBUG00000003665	-	99	86.431	ENSXMAG00000000338	-	100	86.667	Xiphophorus_maculatus
ENSHBUG00000003665	-	55	59.864	ENSXMAG00000008390	rbm14b	66	60.915	Xiphophorus_maculatus