EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003728 (Gene tree)
Gene ID: 102291155
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 6866 bases
Position: chrJH425518.1:765554-772419
Accession: 102291155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023089	MMR_HSR1	PF01926.23	9.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000011983	-	2707	XM_005936102	ENSHBUP00000023089	200 (aa)	XP_005936164	UPI0003BC6EE1

Gene Model

Click here to download ENSHBUG00000003728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003728	-	80	45.122	ENSHBUG00000007827	zgc:101559	70	45.122
ENSHBUG00000003728	-	79	45.570	ENSHBUG00000000890	rab6a	76	45.570
ENSHBUG00000003728	-	81	42.771	ENSHBUG00000003434	rab22a	66	42.771
ENSHBUG00000003728	-	84	37.647	ENSHBUG00000017973	si:ch73-116o1.2	94	35.204
ENSHBUG00000003728	-	83	30.178	ENSHBUG00000003805	-	78	30.178
ENSHBUG00000003728	-	81	30.769	ENSHBUG00000001491	dnajc27	65	30.769
ENSHBUG00000003728	-	84	44.910	ENSHBUG00000006056	-	78	44.910
ENSHBUG00000003728	-	88	55.429	ENSHBUG00000017297	rab15	82	55.429
ENSHBUG00000003728	-	95	42.347	ENSHBUG00000009320	rab25b	96	41.579
ENSHBUG00000003728	-	82	40.476	ENSHBUG00000022669	rab9a	83	40.476
ENSHBUG00000003728	-	76	46.053	ENSHBUG00000003230	rab6bb	76	46.053
ENSHBUG00000003728	-	86	57.310	ENSHBUG00000017620	-	81	57.310
ENSHBUG00000003728	-	86	31.792	ENSHBUG00000010964	rabl2	74	31.792
ENSHBUG00000003728	-	92	44.560	ENSHBUG00000014777	rab11bb	89	44.560
ENSHBUG00000003728	-	84	42.012	ENSHBUG00000015126	rab42a	64	42.012
ENSHBUG00000003728	-	96	36.082	ENSHBUG00000018763	rras	96	36.082
ENSHBUG00000003728	-	96	36.224	ENSHBUG00000014023	si:dkey-13a21.4	95	36.224
ENSHBUG00000003728	-	81	42.236	ENSHBUG00000002014	rab5c	80	40.571
ENSHBUG00000003728	-	90	38.095	ENSHBUG00000009014	-	91	38.095
ENSHBUG00000003728	-	95	43.147	ENSHBUG00000003696	rab18b	93	43.147
ENSHBUG00000003728	-	73	45.033	ENSHBUG00000001714	-	63	45.033
ENSHBUG00000003728	-	85	45.930	ENSHBUG00000013570	-	81	45.930
ENSHBUG00000003728	-	84	44.311	ENSHBUG00000022562	-	78	44.311
ENSHBUG00000003728	-	87	33.708	ENSHBUG00000011397	si:cabz01085950.1	87	33.708
ENSHBUG00000003728	-	79	44.304	ENSHBUG00000003876	rab25a	75	44.304
ENSHBUG00000003728	-	56	37.168	ENSHBUG00000015310	RAP2B	94	37.600
ENSHBUG00000003728	-	81	38.037	ENSHBUG00000001462	RAB17	71	38.037
ENSHBUG00000003728	-	88	39.106	ENSHBUG00000009027	-	85	39.106
ENSHBUG00000003728	-	86	34.857	ENSHBUG00000007788	rheb	92	34.857
ENSHBUG00000003728	-	97	44.059	ENSHBUG00000009333	rab11al	94	44.059
ENSHBUG00000003728	-	86	40.223	ENSHBUG00000012594	RAB29	86	40.223
ENSHBUG00000003728	-	84	47.619	ENSHBUG00000019164	rab2a	79	47.619
ENSHBUG00000003728	-	86	45.087	ENSHBUG00000003539	RAB39B	81	45.087
ENSHBUG00000003728	-	75	30.065	ENSHBUG00000023185	-	80	30.065
ENSHBUG00000003728	-	88	51.977	ENSHBUG00000008497	rab12	71	51.744
ENSHBUG00000003728	-	69	31.884	ENSHBUG00000000803	arl3	72	31.884
ENSHBUG00000003728	-	95	39.487	ENSHBUG00000006823	-	88	39.487
ENSHBUG00000003728	-	79	44.937	ENSHBUG00000014338	RAB41	75	44.937
ENSHBUG00000003728	-	92	44.560	ENSHBUG00000009947	-	89	44.560
ENSHBUG00000003728	-	96	34.896	ENSHBUG00000011998	hrasb	98	34.896
ENSHBUG00000003728	-	94	36.765	ENSHBUG00000016064	rab34a	77	36.765
ENSHBUG00000003728	-	89	56.180	ENSHBUG00000002397	-	84	56.180
ENSHBUG00000003728	-	94	40.909	ENSHBUG00000023035	rab11a	86	40.909
ENSHBUG00000003728	-	85	50.000	ENSHBUG00000019261	si:dkey-16l2.16	81	50.000
ENSHBUG00000003728	-	84	42.775	ENSHBUG00000012905	rab6ba	83	42.775
ENSHBUG00000003728	-	99	47.030	ENSHBUG00000001416	rab35b	100	48.020
ENSHBUG00000003728	-	96	35.233	ENSHBUG00000013197	kras	98	34.197
ENSHBUG00000003728	-	95	39.583	ENSHBUG00000003752	rab5aa	89	39.583
ENSHBUG00000003728	-	98	53.960	ENSHBUG00000010304	rab1ab	98	53.960
ENSHBUG00000003728	-	88	38.547	ENSHBUG00000010852	RAB7A	86	38.547
ENSHBUG00000003728	-	82	47.561	ENSHBUG00000001518	rab18a	80	47.561
ENSHBUG00000003728	-	77	38.065	ENSHBUG00000007966	rab23	81	37.725
ENSHBUG00000003728	-	85	38.857	ENSHBUG00000001595	rab9b	78	38.857
ENSHBUG00000003728	-	82	40.237	ENSHBUG00000013010	rab32b	78	40.237
ENSHBUG00000003728	-	85	39.891	ENSHBUG00000013162	rab33ba	87	39.891
ENSHBUG00000003728	-	88	47.283	ENSHBUG00000000993	rab30	84	47.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003728	-	100	96.500	ENSAPOG00000001040	-	100	96.500	Acanthochromis_polyacanthus
ENSHBUG00000003728	-	100	67.662	ENSACIG00000003157	-	100	67.662	Amphilophus_citrinellus
ENSHBUG00000003728	-	100	96.500	ENSAOCG00000015908	-	100	96.500	Amphiprion_ocellaris
ENSHBUG00000003728	-	100	96.500	ENSAPEG00000004121	-	100	96.500	Amphiprion_percula
ENSHBUG00000003728	-	100	91.500	ENSATEG00000023662	-	100	91.500	Anabas_testudineus
ENSHBUG00000003728	-	100	99.500	ENSACLG00000019643	-	100	99.500	Astatotilapia_calliptera
ENSHBUG00000003728	-	100	92.500	ENSCVAG00000022649	-	100	92.500	Cyprinodon_variegatus
ENSHBUG00000003728	-	86	73.837	ENSDARG00000103934	megf8	99	73.837	Danio_rerio
ENSHBUG00000003728	-	100	91.000	ENSGAFG00000014787	-	100	91.000	Gambusia_affinis
ENSHBUG00000003728	-	100	99.500	ENSMZEG00005015817	-	100	99.500	Maylandia_zebra
ENSHBUG00000003728	-	100	94.000	ENSMMOG00000003924	-	100	94.000	Mola_mola
ENSHBUG00000003728	-	100	94.000	ENSMALG00000020807	-	100	94.000	Monopterus_albus
ENSHBUG00000003728	-	54	89.815	ENSOPRG00000014416	-	100	89.815	Ochotona_princeps
ENSHBUG00000003728	-	100	91.000	ENSORLG00000025395	-	100	91.000	Oryzias_latipes
ENSHBUG00000003728	-	100	91.000	ENSORLG00020009535	-	100	91.000	Oryzias_latipes_hni
ENSHBUG00000003728	-	100	91.500	ENSORLG00015015518	-	100	91.500	Oryzias_latipes_hsok
ENSHBUG00000003728	-	100	87.562	ENSPKIG00000014528	-	100	87.562	Paramormyrops_kingsleyae
ENSHBUG00000003728	-	100	92.500	ENSPFOG00000014418	-	100	92.500	Poecilia_formosa
ENSHBUG00000003728	-	100	92.500	ENSPLAG00000003181	-	100	92.500	Poecilia_latipinna
ENSHBUG00000003728	-	100	92.500	ENSPMEG00000008020	-	100	92.500	Poecilia_mexicana
ENSHBUG00000003728	-	100	92.500	ENSPMEG00000022988	-	100	92.500	Poecilia_mexicana
ENSHBUG00000003728	-	100	99.000	ENSPNYG00000004681	-	100	99.000	Pundamilia_nyererei
ENSHBUG00000003728	-	100	90.000	ENSSFOG00015021754	rab13	100	90.000	Scleropages_formosus
ENSHBUG00000003728	-	100	95.000	ENSSMAG00000016376	-	100	95.000	Scophthalmus_maximus
ENSHBUG00000003728	-	100	67.476	ENSSMAG00000002569	-	100	67.476	Scophthalmus_maximus
ENSHBUG00000003728	-	100	96.500	ENSSDUG00000006307	-	100	96.500	Seriola_dumerili
ENSHBUG00000003728	-	100	96.500	ENSSLDG00000015823	-	100	96.500	Seriola_lalandi_dorsalis
ENSHBUG00000003728	-	100	96.500	ENSSPAG00000022440	-	100	96.500	Stegastes_partitus
ENSHBUG00000003728	-	100	94.000	ENSTNIG00000018319	-	100	94.000	Tetraodon_nigroviridis
ENSHBUG00000003728	-	100	91.500	ENSXMAG00000016094	-	100	91.500	Xiphophorus_maculatus