EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000003796 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 1360 bases
Position: chrJH425539.1:356601-357960
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023141	RVT_1	PF00078.27	3.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000011842	-	1137	-	ENSHBUP00000023141	378 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000003796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000003796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000003796	-	68	34.495	ENSHBUG00000020868	-	70	34.495
ENSHBUG00000003796	-	51	33.333	ENSHBUG00000007736	-	54	33.333
ENSHBUG00000003796	-	67	31.343	ENSHBUG00000011715	-	71	31.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000003796	-	52	30.396	ENSAPOG00000015742	-	72	30.396	Acanthochromis_polyacanthus
ENSHBUG00000003796	-	83	55.337	ENSACIG00000020849	-	94	55.337	Amphilophus_citrinellus
ENSHBUG00000003796	-	94	52.093	ENSACIG00000020856	-	93	52.103	Amphilophus_citrinellus
ENSHBUG00000003796	-	56	30.041	ENSAOCG00000012592	-	57	30.041	Amphiprion_ocellaris
ENSHBUG00000003796	-	54	32.766	ENSAOCG00000000894	-	70	32.766	Amphiprion_ocellaris
ENSHBUG00000003796	-	82	50.442	ENSATEG00000019721	-	89	50.442	Anabas_testudineus
ENSHBUG00000003796	-	56	34.025	ENSACAG00000010816	-	65	34.025	Anolis_carolinensis
ENSHBUG00000003796	-	56	31.452	ENSACLG00000012857	-	67	31.452	Astatotilapia_calliptera
ENSHBUG00000003796	-	65	33.818	ENSACLG00000011319	-	72	33.818	Astatotilapia_calliptera
ENSHBUG00000003796	-	54	30.638	ENSACLG00000013571	-	58	30.508	Astatotilapia_calliptera
ENSHBUG00000003796	-	83	38.619	ENSAMXG00000035718	-	71	39.247	Astyanax_mexicanus
ENSHBUG00000003796	-	51	30.631	ENSAMXG00000041014	-	84	30.631	Astyanax_mexicanus
ENSHBUG00000003796	-	80	33.956	ENSAMXG00000033384	-	54	33.956	Astyanax_mexicanus
ENSHBUG00000003796	-	97	38.288	ENSAMXG00000032036	-	57	39.161	Astyanax_mexicanus
ENSHBUG00000003796	-	83	34.545	ENSAMXG00000038901	-	61	40.484	Astyanax_mexicanus
ENSHBUG00000003796	-	71	30.263	ENSCVAG00000018360	-	73	30.263	Cyprinodon_variegatus
ENSHBUG00000003796	-	56	30.837	ENSELUG00000014378	-	55	30.837	Esox_lucius
ENSHBUG00000003796	-	74	31.290	ENSELUG00000000386	-	68	31.290	Esox_lucius
ENSHBUG00000003796	-	71	32.000	ENSGAGG00000013921	-	81	32.000	Gopherus_agassizii
ENSHBUG00000003796	-	71	30.921	ENSKMAG00000014393	-	71	30.921	Kryptolebias_marmoratus
ENSHBUG00000003796	-	55	33.333	ENSLBEG00000020242	-	66	33.333	Labrus_bergylta
ENSHBUG00000003796	-	55	34.454	ENSMZEG00005016362	-	84	34.454	Maylandia_zebra
ENSHBUG00000003796	-	70	32.881	ENSMZEG00005025877	-	69	32.881	Maylandia_zebra
ENSHBUG00000003796	-	76	31.288	ENSMZEG00005011529	-	61	31.288	Maylandia_zebra
ENSHBUG00000003796	-	70	32.881	ENSMZEG00005008304	-	69	32.881	Maylandia_zebra
ENSHBUG00000003796	-	76	31.288	ENSMZEG00005017030	-	61	31.288	Maylandia_zebra
ENSHBUG00000003796	-	83	85.714	ENSNBRG00000022130	-	83	85.714	Neolamprologus_brichardi
ENSHBUG00000003796	-	57	30.894	ENSNBRG00000000972	-	61	30.894	Neolamprologus_brichardi
ENSHBUG00000003796	-	54	30.932	ENSNBRG00000012595	-	54	30.932	Neolamprologus_brichardi
ENSHBUG00000003796	-	83	55.848	ENSNBRG00000001934	-	73	55.848	Neolamprologus_brichardi
ENSHBUG00000003796	-	53	35.065	ENSORLG00000023713	-	59	35.065	Oryzias_latipes
ENSHBUG00000003796	-	54	31.489	ENSORLG00000028454	-	75	31.489	Oryzias_latipes
ENSHBUG00000003796	-	53	31.466	ENSORLG00020014149	-	71	31.466	Oryzias_latipes_hni
ENSHBUG00000003796	-	51	31.250	ENSORLG00020007779	-	60	31.250	Oryzias_latipes_hni
ENSHBUG00000003796	-	51	32.143	ENSORLG00020018629	-	59	32.143	Oryzias_latipes_hni
ENSHBUG00000003796	-	51	32.143	ENSORLG00015007703	-	57	32.143	Oryzias_latipes_hsok
ENSHBUG00000003796	-	51	32.301	ENSORLG00015000419	-	64	32.301	Oryzias_latipes_hsok
ENSHBUG00000003796	-	53	30.603	ENSORLG00015022393	-	77	30.603	Oryzias_latipes_hsok
ENSHBUG00000003796	-	55	36.170	ENSPMGG00000014421	-	57	36.170	Periophthalmus_magnuspinnatus
ENSHBUG00000003796	-	55	33.613	ENSPLAG00000015080	-	57	33.613	Poecilia_latipinna
ENSHBUG00000003796	-	71	30.033	ENSPREG00000006501	-	53	30.033	Poecilia_reticulata
ENSHBUG00000003796	-	53	38.865	ENSPREG00000010319	-	55	38.865	Poecilia_reticulata
ENSHBUG00000003796	-	55	31.667	ENSPREG00000001352	-	66	31.667	Poecilia_reticulata
ENSHBUG00000003796	-	53	33.478	ENSPREG00000004933	-	58	33.478	Poecilia_reticulata
ENSHBUG00000003796	-	75	54.633	ENSPNYG00000002652	-	82	54.633	Pundamilia_nyererei
ENSHBUG00000003796	-	56	32.377	ENSPNYG00000002466	-	81	32.377	Pundamilia_nyererei
ENSHBUG00000003796	-	72	30.097	ENSPNAG00000024749	-	72	30.097	Pygocentrus_nattereri
ENSHBUG00000003796	-	58	32.540	ENSPNAG00000014375	-	61	32.540	Pygocentrus_nattereri
ENSHBUG00000003796	-	54	30.213	ENSSDUG00000021791	-	78	30.213	Seriola_dumerili
ENSHBUG00000003796	-	58	33.191	ENSSLDG00000006955	-	55	33.191	Seriola_lalandi_dorsalis
ENSHBUG00000003796	-	72	31.596	ENSSPUG00000015446	-	69	31.596	Sphenodon_punctatus
ENSHBUG00000003796	-	61	33.080	ENSSPAG00000000151	-	54	33.080	Stegastes_partitus
ENSHBUG00000003796	-	56	30.328	ENSXCOG00000016894	-	72	30.328	Xiphophorus_couchianus
ENSHBUG00000003796	-	53	37.445	ENSXMAG00000023211	-	50	37.445	Xiphophorus_maculatus
ENSHBUG00000003796	-	65	33.452	ENSXMAG00000026184	-	94	33.452	Xiphophorus_maculatus