EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000004496 (Gene tree)
Gene ID: 102290621
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 15922 bases
Position: chrJH425456.1:1414076-1429997
Accession: 102290621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023564	PRP1_N	PF06424.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000010781	-	5490	XM_005931833	ENSHBUP00000023564	969 (aa)	XP_005931895	UPI00032A0E47

Gene Model

Click here to download ENSHBUG00000004496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000004496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000004496	prpf6	96	92.349	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSHBUG00000004496	prpf6	100	98.142	ENSAPOG00000010395	prpf6	100	98.142	Acanthochromis_polyacanthus
ENSHBUG00000004496	prpf6	96	91.720	ENSAMEG00000001916	PRPF6	99	91.295	Ailuropoda_melanoleuca
ENSHBUG00000004496	prpf6	100	98.968	ENSACIG00000019862	prpf6	100	98.968	Amphilophus_citrinellus
ENSHBUG00000004496	prpf6	100	98.246	ENSAOCG00000012988	prpf6	100	98.246	Amphiprion_ocellaris
ENSHBUG00000004496	prpf6	96	91.720	ENSAPEG00000008301	prpf6	100	91.935	Amphiprion_percula
ENSHBUG00000004496	prpf6	100	97.730	ENSATEG00000005581	prpf6	100	97.730	Anabas_testudineus
ENSHBUG00000004496	prpf6	96	92.880	ENSACAG00000006464	PRPF6	95	92.455	Anolis_carolinensis
ENSHBUG00000004496	prpf6	96	92.349	ENSANAG00000012661	PRPF6	100	92.815	Aotus_nancymaae
ENSHBUG00000004496	prpf6	100	100.000	ENSACLG00000025875	prpf6	100	100.000	Astatotilapia_calliptera
ENSHBUG00000004496	prpf6	97	94.597	ENSAMXG00000001929	prpf6	100	92.828	Astyanax_mexicanus
ENSHBUG00000004496	prpf6	96	92.667	ENSBTAG00000011656	PRPF6	100	92.242	Bos_taurus
ENSHBUG00000004496	prpf6	96	92.349	ENSCJAG00000010616	PRPF6	100	91.923	Callithrix_jacchus
ENSHBUG00000004496	prpf6	96	92.774	ENSCAFG00000013165	PRPF6	100	92.349	Canis_familiaris
ENSHBUG00000004496	prpf6	96	92.774	ENSCAFG00020002050	PRPF6	100	92.349	Canis_lupus_dingo
ENSHBUG00000004496	prpf6	96	92.667	ENSCHIG00000018187	PRPF6	100	92.242	Capra_hircus
ENSHBUG00000004496	prpf6	96	92.774	ENSTSYG00000007814	PRPF6	100	92.349	Carlito_syrichta
ENSHBUG00000004496	prpf6	93	91.930	ENSCAPG00000015077	PRPF6	100	91.058	Cavia_aperea
ENSHBUG00000004496	prpf6	96	93.199	ENSCPOG00000007518	PRPF6	100	92.774	Cavia_porcellus
ENSHBUG00000004496	prpf6	96	89.267	ENSCCAG00000024564	PRPF6	100	88.842	Cebus_capucinus
ENSHBUG00000004496	prpf6	96	92.455	ENSCATG00000037473	PRPF6	100	92.030	Cercocebus_atys
ENSHBUG00000004496	prpf6	96	89.692	ENSCLAG00000003854	PRPF6	100	89.267	Chinchilla_lanigera
ENSHBUG00000004496	prpf6	96	87.751	ENSCSAG00000016742	PRPF6	100	87.328	Chlorocebus_sabaeus
ENSHBUG00000004496	prpf6	81	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSHBUG00000004496	prpf6	98	91.675	ENSCPBG00000013964	PRPF6	96	92.766	Chrysemys_picta_bellii
ENSHBUG00000004496	prpf6	96	72.622	ENSCING00000008817	-	99	72.199	Ciona_intestinalis
ENSHBUG00000004496	prpf6	96	92.242	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSHBUG00000004496	prpf6	96	93.199	ENSCGRG00001022666	Prpf6	100	92.774	Cricetulus_griseus_chok1gshd
ENSHBUG00000004496	prpf6	96	92.366	ENSCSEG00000018561	prpf6	100	92.366	Cynoglossus_semilaevis
ENSHBUG00000004496	prpf6	100	96.698	ENSCVAG00000010550	prpf6	100	96.698	Cyprinodon_variegatus
ENSHBUG00000004496	prpf6	100	92.930	ENSDARG00000091367	prpf6	100	94.386	Danio_rerio
ENSHBUG00000004496	prpf6	96	92.349	ENSDNOG00000040544	PRPF6	100	92.030	Dasypus_novemcinctus
ENSHBUG00000004496	prpf6	87	92.407	ENSDORG00000005406	Prpf6	100	92.407	Dipodomys_ordii
ENSHBUG00000004496	prpf6	96	71.720	FBgn0036828	CG6841	99	71.828	Drosophila_melanogaster
ENSHBUG00000004496	prpf6	83	91.520	ENSETEG00000004447	PRPF6	85	91.520	Echinops_telfairi
ENSHBUG00000004496	prpf6	96	86.138	ENSEBUG00000008835	prpf6	100	85.714	Eptatretus_burgeri
ENSHBUG00000004496	prpf6	99	90.402	ENSEASG00005023115	PRPF6	100	92.242	Equus_asinus_asinus
ENSHBUG00000004496	prpf6	96	88.417	ENSECAG00000013983	PRPF6	100	87.991	Equus_caballus
ENSHBUG00000004496	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSHBUG00000004496	prpf6	97	95.016	ENSELUG00000001945	prpf6	94	95.016	Esox_lucius
ENSHBUG00000004496	prpf6	96	92.774	ENSFCAG00000001183	PRPF6	100	92.349	Felis_catus
ENSHBUG00000004496	prpf6	96	86.702	ENSFALG00000006046	-	97	86.980	Ficedula_albicollis
ENSHBUG00000004496	prpf6	96	92.804	ENSFALG00000010326	-	98	92.487	Ficedula_albicollis
ENSHBUG00000004496	prpf6	96	91.711	ENSFDAG00000006451	PRPF6	100	92.404	Fukomys_damarensis
ENSHBUG00000004496	prpf6	100	97.420	ENSFHEG00000000560	prpf6	100	97.420	Fundulus_heteroclitus
ENSHBUG00000004496	prpf6	97	94.062	ENSGMOG00000015622	prpf6	99	93.531	Gadus_morhua
ENSHBUG00000004496	prpf6	96	93.092	ENSGALG00000006001	PRPF6	100	92.774	Gallus_gallus
ENSHBUG00000004496	prpf6	100	93.189	ENSGAFG00000021109	prpf6	100	93.189	Gambusia_affinis
ENSHBUG00000004496	prpf6	97	95.551	ENSGACG00000002576	prpf6	100	95.551	Gasterosteus_aculeatus
ENSHBUG00000004496	prpf6	98	91.771	ENSGAGG00000008653	PRPF6	96	92.872	Gopherus_agassizii
ENSHBUG00000004496	prpf6	96	92.349	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSHBUG00000004496	prpf6	96	93.092	ENSHGLG00000009222	PRPF6	100	92.667	Heterocephalus_glaber_female
ENSHBUG00000004496	prpf6	93	93.021	ENSHGLG00100016600	PRPF6	100	92.585	Heterocephalus_glaber_male
ENSHBUG00000004496	prpf6	100	95.769	ENSHCOG00000011513	prpf6	100	95.769	Hippocampus_comes
ENSHBUG00000004496	prpf6	100	92.813	ENSIPUG00000004912	prpf6	100	92.813	Ictalurus_punctatus
ENSHBUG00000004496	prpf6	96	90.658	ENSSTOG00000002922	PRPF6	100	89.809	Ictidomys_tridecemlineatus
ENSHBUG00000004496	prpf6	96	93.199	ENSJJAG00000000836	Prpf6	100	92.774	Jaculus_jaculus
ENSHBUG00000004496	prpf6	100	97.730	ENSKMAG00000017800	prpf6	100	97.730	Kryptolebias_marmoratus
ENSHBUG00000004496	prpf6	100	96.594	ENSLBEG00000012582	prpf6	100	96.594	Labrus_bergylta
ENSHBUG00000004496	prpf6	98	92.708	ENSLOCG00000004827	prpf6	96	92.340	Lepisosteus_oculatus
ENSHBUG00000004496	prpf6	96	92.455	ENSLAFG00000005272	PRPF6	100	92.030	Loxodonta_africana
ENSHBUG00000004496	prpf6	96	92.242	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSHBUG00000004496	prpf6	96	86.093	ENSMMUG00000015558	PRPF6	98	93.414	Macaca_mulatta
ENSHBUG00000004496	prpf6	96	79.767	ENSMNEG00000045555	PRPF6	100	79.343	Macaca_nemestrina
ENSHBUG00000004496	prpf6	100	97.626	ENSMAMG00000010718	prpf6	100	97.626	Mastacembelus_armatus
ENSHBUG00000004496	prpf6	90	99.543	ENSMZEG00005026539	prpf6	100	99.543	Maylandia_zebra
ENSHBUG00000004496	prpf6	97	99.467	ENSMZEG00005015261	-	100	99.467	Maylandia_zebra
ENSHBUG00000004496	prpf6	93	93.239	ENSMGAG00000006634	PRPF6	100	92.912	Meleagris_gallopavo
ENSHBUG00000004496	prpf6	96	93.199	ENSMAUG00000013969	Prpf6	100	92.774	Mesocricetus_auratus
ENSHBUG00000004496	prpf6	84	91.849	ENSMICG00000017793	PRPF6	98	91.862	Microcebus_murinus
ENSHBUG00000004496	prpf6	96	93.092	ENSMOCG00000001701	Prpf6	100	92.667	Microtus_ochrogaster
ENSHBUG00000004496	prpf6	96	97.527	ENSMMOG00000020419	prpf6	100	97.527	Mola_mola
ENSHBUG00000004496	prpf6	93	93.835	ENSMODG00000017051	PRPF6	99	93.342	Monodelphis_domestica
ENSHBUG00000004496	prpf6	95	98.152	ENSMALG00000000089	prpf6	100	98.152	Monopterus_albus
ENSHBUG00000004496	prpf6	96	86.929	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSHBUG00000004496	prpf6	96	93.199	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSHBUG00000004496	prpf6	96	93.199	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSHBUG00000004496	prpf6	96	93.199	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSHBUG00000004496	prpf6	86	92.953	ENSMPUG00000008673	PRPF6	98	92.953	Mustela_putorius_furo
ENSHBUG00000004496	prpf6	96	93.305	ENSNGAG00000003365	Prpf6	100	92.880	Nannospalax_galili
ENSHBUG00000004496	prpf6	100	99.897	ENSNBRG00000015025	prpf6	100	99.897	Neolamprologus_brichardi
ENSHBUG00000004496	prpf6	96	92.242	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSHBUG00000004496	prpf6	96	83.936	ENSMEUG00000009824	-	90	84.190	Notamacropus_eugenii
ENSHBUG00000004496	prpf6	96	87.248	ENSODEG00000004841	PRPF6	100	86.823	Octodon_degus
ENSHBUG00000004496	prpf6	100	99.587	ENSONIG00000017406	prpf6	100	99.587	Oreochromis_niloticus
ENSHBUG00000004496	prpf6	96	93.092	ENSOANG00000004920	PRPF6	100	92.667	Ornithorhynchus_anatinus
ENSHBUG00000004496	prpf6	95	90.880	ENSOCUG00000014151	PRPF6	100	90.451	Oryctolagus_cuniculus
ENSHBUG00000004496	prpf6	100	96.698	ENSORLG00000009592	prpf6	100	96.698	Oryzias_latipes
ENSHBUG00000004496	prpf6	100	96.801	ENSORLG00020001458	prpf6	100	96.801	Oryzias_latipes_hni
ENSHBUG00000004496	prpf6	100	96.801	ENSORLG00015018762	prpf6	100	96.801	Oryzias_latipes_hsok
ENSHBUG00000004496	prpf6	100	97.214	ENSOMEG00000012174	prpf6	100	97.214	Oryzias_melastigma
ENSHBUG00000004496	prpf6	96	85.987	ENSOGAG00000007573	PRPF6	100	85.563	Otolemur_garnettii
ENSHBUG00000004496	prpf6	96	92.242	ENSOARG00000008776	PRPF6	99	91.817	Ovis_aries
ENSHBUG00000004496	prpf6	96	92.349	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSHBUG00000004496	prpf6	96	92.774	ENSPPRG00000008497	PRPF6	100	92.349	Panthera_pardus
ENSHBUG00000004496	prpf6	93	92.694	ENSPTIG00000011184	PRPF6	97	92.257	Panthera_tigris_altaica
ENSHBUG00000004496	prpf6	96	92.349	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSHBUG00000004496	prpf6	96	92.030	ENSPANG00000024135	PRPF6	100	91.605	Papio_anubis
ENSHBUG00000004496	prpf6	98	93.555	ENSPKIG00000005627	prpf6	99	94.787	Paramormyrops_kingsleyae
ENSHBUG00000004496	prpf6	90	92.744	ENSPSIG00000007717	PRPF6	100	92.290	Pelodiscus_sinensis
ENSHBUG00000004496	prpf6	99	94.628	ENSPMGG00000008925	prpf6	99	93.905	Periophthalmus_magnuspinnatus
ENSHBUG00000004496	prpf6	96	93.199	ENSPEMG00000016036	Prpf6	100	92.774	Peromyscus_maniculatus_bairdii
ENSHBUG00000004496	prpf6	98	87.147	ENSPMAG00000006144	prpf6	100	87.777	Petromyzon_marinus
ENSHBUG00000004496	prpf6	96	93.199	ENSPCIG00000017909	PRPF6	100	92.774	Phascolarctos_cinereus
ENSHBUG00000004496	prpf6	100	96.830	ENSPFOG00000006431	prpf6	99	96.830	Poecilia_formosa
ENSHBUG00000004496	prpf6	100	97.626	ENSPLAG00000005974	prpf6	100	97.626	Poecilia_latipinna
ENSHBUG00000004496	prpf6	100	97.833	ENSPMEG00000009977	prpf6	100	97.833	Poecilia_mexicana
ENSHBUG00000004496	prpf6	100	97.730	ENSPREG00000017993	prpf6	95	97.730	Poecilia_reticulata
ENSHBUG00000004496	prpf6	96	91.817	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSHBUG00000004496	prpf6	91	94.935	ENSPCAG00000006536	PRPF6	88	94.281	Procavia_capensis
ENSHBUG00000004496	prpf6	96	92.349	ENSPCOG00000016881	PRPF6	100	91.923	Propithecus_coquereli
ENSHBUG00000004496	prpf6	96	86.716	ENSPVAG00000014316	PRPF6	100	86.291	Pteropus_vampyrus
ENSHBUG00000004496	prpf6	100	85.934	ENSPNYG00000001939	prpf6	100	85.934	Pundamilia_nyererei
ENSHBUG00000004496	prpf6	100	93.340	ENSPNAG00000015606	prpf6	100	93.340	Pygocentrus_nattereri
ENSHBUG00000004496	prpf6	96	93.092	ENSRNOG00000051498	Prpf6	100	92.667	Rattus_norvegicus
ENSHBUG00000004496	prpf6	96	92.242	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSHBUG00000004496	prpf6	96	89.206	ENSRROG00000040969	PRPF6	98	92.042	Rhinopithecus_roxellana
ENSHBUG00000004496	prpf6	87	89.558	ENSSBOG00000020632	PRPF6	93	87.370	Saimiri_boliviensis_boliviensis
ENSHBUG00000004496	prpf6	96	93.199	ENSSHAG00000016810	PRPF6	100	92.774	Sarcophilus_harrisii
ENSHBUG00000004496	prpf6	95	95.376	ENSSFOG00015020859	prpf6	100	95.376	Scleropages_formosus
ENSHBUG00000004496	prpf6	100	96.078	ENSSMAG00000008112	prpf6	100	96.078	Scophthalmus_maximus
ENSHBUG00000004496	prpf6	100	98.039	ENSSDUG00000016142	prpf6	100	98.039	Seriola_dumerili
ENSHBUG00000004496	prpf6	100	98.039	ENSSLDG00000025283	prpf6	99	98.039	Seriola_lalandi_dorsalis
ENSHBUG00000004496	prpf6	90	91.714	ENSSPUG00000018260	PRPF6	100	91.260	Sphenodon_punctatus
ENSHBUG00000004496	prpf6	100	98.039	ENSSPAG00000015850	prpf6	100	98.039	Stegastes_partitus
ENSHBUG00000004496	prpf6	97	91.309	ENSSSCG00000029119	PRPF6	98	92.148	Sus_scrofa
ENSHBUG00000004496	prpf6	96	92.903	ENSTGUG00000007221	PRPF6	100	92.585	Taeniopygia_guttata
ENSHBUG00000004496	prpf6	100	96.801	ENSTRUG00000002920	prpf6	100	96.801	Takifugu_rubripes
ENSHBUG00000004496	prpf6	96	90.648	ENSTNIG00000017873	prpf6	100	90.648	Tetraodon_nigroviridis
ENSHBUG00000004496	prpf6	85	95.000	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSHBUG00000004496	prpf6	96	92.455	ENSTTRG00000013068	PRPF6	100	92.030	Tursiops_truncatus
ENSHBUG00000004496	prpf6	98	87.461	ENSUMAG00000021631	PRPF6	98	90.840	Ursus_maritimus
ENSHBUG00000004496	prpf6	96	92.774	ENSVVUG00000014948	PRPF6	100	92.349	Vulpes_vulpes
ENSHBUG00000004496	prpf6	96	92.340	ENSXETG00000012054	prpf6	97	91.915	Xenopus_tropicalis
ENSHBUG00000004496	prpf6	100	97.730	ENSXCOG00000008082	prpf6	100	97.730	Xiphophorus_couchianus
ENSHBUG00000004496	prpf6	100	97.626	ENSXMAG00000015581	prpf6	100	97.626	Xiphophorus_maculatus