EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000004666 (Gene tree)
Gene ID: 102301042
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 6695 bases
Position: chrJH425433.1:684477-691171
Accession: 102301042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000003423	RNase_H	PF00075.24	1.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000010434	-	2203	XM_014336024	ENSHBUP00000003423	309 (aa)	XP_014191510	UPI0006C9A354

Gene Model

Click here to download ENSHBUG00000004666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000004666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000004666	rnaseh1	87	55.556	ENSG00000171865	RNASEH1	89	54.815	Homo_sapiens
ENSHBUG00000004666	rnaseh1	98	79.538	ENSAPOG00000000412	rnaseh1	99	79.538	Acanthochromis_polyacanthus
ENSHBUG00000004666	rnaseh1	87	53.704	ENSAMEG00000018433	RNASEH1	98	50.842	Ailuropoda_melanoleuca
ENSHBUG00000004666	rnaseh1	99	87.987	ENSACIG00000014666	rnaseh1	99	87.987	Amphilophus_citrinellus
ENSHBUG00000004666	rnaseh1	98	82.508	ENSAOCG00000015210	rnaseh1	99	82.178	Amphiprion_ocellaris
ENSHBUG00000004666	rnaseh1	98	82.508	ENSAPEG00000014104	rnaseh1	99	82.178	Amphiprion_percula
ENSHBUG00000004666	rnaseh1	99	81.433	ENSATEG00000000598	rnaseh1	99	80.782	Anabas_testudineus
ENSHBUG00000004666	rnaseh1	83	54.511	ENSAPLG00000001961	RNASEH1	100	54.135	Anas_platyrhynchos
ENSHBUG00000004666	rnaseh1	87	49.498	ENSACAG00000016857	rnaseh1	91	47.508	Anolis_carolinensis
ENSHBUG00000004666	rnaseh1	87	55.597	ENSANAG00000024055	RNASEH1	89	55.224	Aotus_nancymaae
ENSHBUG00000004666	rnaseh1	100	98.382	ENSACLG00000006741	rnaseh1	100	98.382	Astatotilapia_calliptera
ENSHBUG00000004666	rnaseh1	95	53.041	ENSAMXG00000042940	rnaseh1	97	55.596	Astyanax_mexicanus
ENSHBUG00000004666	rnaseh1	96	52.805	ENSBTAG00000016235	RNASEH1	99	52.475	Bos_taurus
ENSHBUG00000004666	rnaseh1	88	36.264	WBGene00004382	rnh-1.0	97	36.264	Caenorhabditis_elegans
ENSHBUG00000004666	rnaseh1	87	53.650	ENSCJAG00000035450	RNASEH1	89	53.650	Callithrix_jacchus
ENSHBUG00000004666	rnaseh1	94	51.678	ENSCAFG00000003259	RNASEH1	98	51.678	Canis_familiaris
ENSHBUG00000004666	rnaseh1	96	53.846	ENSCHIG00000022264	-	99	53.512	Capra_hircus
ENSHBUG00000004666	rnaseh1	81	45.418	ENSCHIG00000022230	-	99	43.825	Capra_hircus
ENSHBUG00000004666	rnaseh1	88	53.285	ENSTSYG00000012926	RNASEH1	89	53.875	Carlito_syrichta
ENSHBUG00000004666	rnaseh1	82	55.118	ENSCAPG00000004813	RNASEH1	99	53.150	Cavia_aperea
ENSHBUG00000004666	rnaseh1	88	55.351	ENSCPOG00000022278	Rnaseh1	87	53.875	Cavia_porcellus
ENSHBUG00000004666	rnaseh1	87	55.109	ENSCCAG00000038017	RNASEH1	89	55.109	Cebus_capucinus
ENSHBUG00000004666	rnaseh1	87	54.074	ENSCATG00000016515	-	89	53.704	Cercocebus_atys
ENSHBUG00000004666	rnaseh1	87	49.254	ENSCATG00000016818	-	89	48.881	Cercocebus_atys
ENSHBUG00000004666	rnaseh1	87	55.351	ENSCLAG00000002440	RNASEH1	89	54.478	Chinchilla_lanigera
ENSHBUG00000004666	rnaseh1	87	54.815	ENSCSAG00000006943	RNASEH1	89	54.815	Chlorocebus_sabaeus
ENSHBUG00000004666	rnaseh1	54	62.353	ENSCHOG00000008547	RNASEH1	74	67.550	Choloepus_hoffmanni
ENSHBUG00000004666	rnaseh1	90	53.873	ENSCPBG00000021620	RNASEH1	99	55.072	Chrysemys_picta_bellii
ENSHBUG00000004666	rnaseh1	88	37.410	ENSCING00000014054	-	93	37.410	Ciona_intestinalis
ENSHBUG00000004666	rnaseh1	74	38.462	ENSCSAVG00000000009	-	96	37.657	Ciona_savignyi
ENSHBUG00000004666	rnaseh1	87	55.556	ENSCANG00000037763	RNASEH1	89	55.556	Colobus_angolensis_palliatus
ENSHBUG00000004666	rnaseh1	87	54.244	ENSCGRG00001008950	Rnaseh1	89	54.815	Cricetulus_griseus_chok1gshd
ENSHBUG00000004666	rnaseh1	87	54.244	ENSCGRG00000006029	Rnaseh1	89	54.815	Cricetulus_griseus_crigri
ENSHBUG00000004666	rnaseh1	96	68.525	ENSCSEG00000005741	rnaseh1	97	68.881	Cynoglossus_semilaevis
ENSHBUG00000004666	rnaseh1	98	74.754	ENSCVAG00000018717	rnaseh1	99	74.098	Cyprinodon_variegatus
ENSHBUG00000004666	rnaseh1	89	66.065	ENSDARG00000042571	rnaseh1	98	65.704	Danio_rerio
ENSHBUG00000004666	rnaseh1	93	52.577	ENSDNOG00000016056	RNASEH1	94	52.218	Dasypus_novemcinctus
ENSHBUG00000004666	rnaseh1	87	54.244	ENSDORG00000000704	Rnaseh1	89	54.412	Dipodomys_ordii
ENSHBUG00000004666	rnaseh1	87	37.586	FBgn0023171	rnh1	92	37.586	Drosophila_melanogaster
ENSHBUG00000004666	rnaseh1	96	50.505	ENSETEG00000012674	RNASEH1	99	50.168	Echinops_telfairi
ENSHBUG00000004666	rnaseh1	88	46.735	ENSEBUG00000008898	rnaseh1	99	45.704	Eptatretus_burgeri
ENSHBUG00000004666	rnaseh1	87	45.556	ENSEBUG00000006116	rnaseh1	78	44.485	Eptatretus_burgeri
ENSHBUG00000004666	rnaseh1	95	54.209	ENSEASG00005022200	RNASEH1	97	53.535	Equus_asinus_asinus
ENSHBUG00000004666	rnaseh1	95	54.209	ENSECAG00000020695	RNASEH1	97	53.535	Equus_caballus
ENSHBUG00000004666	rnaseh1	96	69.900	ENSELUG00000010112	rnaseh1	99	69.231	Esox_lucius
ENSHBUG00000004666	rnaseh1	94	53.220	ENSFCAG00000025832	RNASEH1	98	52.881	Felis_catus
ENSHBUG00000004666	rnaseh1	88	57.746	ENSFALG00000002069	RNASEH1	93	57.746	Ficedula_albicollis
ENSHBUG00000004666	rnaseh1	87	54.244	ENSFDAG00000002035	RNASEH1	79	53.731	Fukomys_damarensis
ENSHBUG00000004666	rnaseh1	96	71.380	ENSGMOG00000013818	rnaseh1	99	70.707	Gadus_morhua
ENSHBUG00000004666	rnaseh1	88	55.515	ENSGALG00000016389	RNASEH1	93	55.515	Gallus_gallus
ENSHBUG00000004666	rnaseh1	96	72.000	ENSGAFG00000001776	rnaseh1	100	72.000	Gambusia_affinis
ENSHBUG00000004666	rnaseh1	96	80.537	ENSGACG00000011935	rnaseh1	98	79.866	Gasterosteus_aculeatus
ENSHBUG00000004666	rnaseh1	95	52.716	ENSGAGG00000009150	RNASEH1	70	52.396	Gopherus_agassizii
ENSHBUG00000004666	rnaseh1	87	55.597	ENSGGOG00000034822	RNASEH1	89	54.851	Gorilla_gorilla
ENSHBUG00000004666	rnaseh1	87	53.137	ENSHGLG00000002585	Rnaseh1	82	52.239	Heterocephalus_glaber_female
ENSHBUG00000004666	rnaseh1	87	53.137	ENSHGLG00100005105	Rnaseh1	82	52.239	Heterocephalus_glaber_male
ENSHBUG00000004666	rnaseh1	98	71.661	ENSHCOG00000012329	rnaseh1	100	71.010	Hippocampus_comes
ENSHBUG00000004666	rnaseh1	96	57.525	ENSIPUG00000023060	rnaseh1	98	59.636	Ictalurus_punctatus
ENSHBUG00000004666	rnaseh1	87	54.212	ENSSTOG00000012774	RNASEH1	91	55.185	Ictidomys_tridecemlineatus
ENSHBUG00000004666	rnaseh1	85	44.697	ENSJJAG00000008994	-	89	44.697	Jaculus_jaculus
ENSHBUG00000004666	rnaseh1	87	50.000	ENSJJAG00000021481	-	89	48.889	Jaculus_jaculus
ENSHBUG00000004666	rnaseh1	79	52.653	ENSJJAG00000020238	Rnaseh1	90	51.429	Jaculus_jaculus
ENSHBUG00000004666	rnaseh1	97	72.757	ENSKMAG00000001373	rnaseh1	99	72.757	Kryptolebias_marmoratus
ENSHBUG00000004666	rnaseh1	100	73.871	ENSLBEG00000004480	rnaseh1	97	77.536	Labrus_bergylta
ENSHBUG00000004666	rnaseh1	89	55.000	ENSLACG00000007100	RNASEH1	90	55.357	Latimeria_chalumnae
ENSHBUG00000004666	rnaseh1	90	61.566	ENSLOCG00000017212	rnaseh1	99	62.191	Lepisosteus_oculatus
ENSHBUG00000004666	rnaseh1	94	53.199	ENSLAFG00000015091	RNASEH1	98	51.852	Loxodonta_africana
ENSHBUG00000004666	rnaseh1	87	54.815	ENSMFAG00000000063	-	89	54.815	Macaca_fascicularis
ENSHBUG00000004666	rnaseh1	87	50.373	ENSMFAG00000002323	-	89	50.000	Macaca_fascicularis
ENSHBUG00000004666	rnaseh1	87	50.373	ENSMMUG00000019280	-	89	49.627	Macaca_mulatta
ENSHBUG00000004666	rnaseh1	87	55.185	ENSMNEG00000040183	-	89	55.185	Macaca_nemestrina
ENSHBUG00000004666	rnaseh1	87	50.000	ENSMNEG00000029676	-	89	49.627	Macaca_nemestrina
ENSHBUG00000004666	rnaseh1	87	51.493	ENSMLEG00000028662	-	89	51.119	Mandrillus_leucophaeus
ENSHBUG00000004666	rnaseh1	81	54.545	ENSMLEG00000039352	-	98	54.545	Mandrillus_leucophaeus
ENSHBUG00000004666	rnaseh1	99	78.827	ENSMAMG00000019725	rnaseh1	99	78.671	Mastacembelus_armatus
ENSHBUG00000004666	rnaseh1	100	98.382	ENSMZEG00005013006	rnaseh1	100	98.382	Maylandia_zebra
ENSHBUG00000004666	rnaseh1	78	55.967	ENSMGAG00000013979	RNASEH1	99	55.967	Meleagris_gallopavo
ENSHBUG00000004666	rnaseh1	87	54.212	ENSMAUG00000014957	Rnaseh1	89	54.244	Mesocricetus_auratus
ENSHBUG00000004666	rnaseh1	87	55.185	ENSMICG00000033156	RNASEH1	88	55.185	Microcebus_murinus
ENSHBUG00000004666	rnaseh1	87	54.480	ENSMOCG00000015522	Rnaseh1	89	55.556	Microtus_ochrogaster
ENSHBUG00000004666	rnaseh1	95	77.891	ENSMMOG00000015902	rnaseh1	96	77.551	Mola_mola
ENSHBUG00000004666	rnaseh1	87	54.815	ENSMODG00000014491	-	89	54.815	Monodelphis_domestica
ENSHBUG00000004666	rnaseh1	77	50.209	ENSMODG00000028814	-	91	50.209	Monodelphis_domestica
ENSHBUG00000004666	rnaseh1	97	80.464	ENSMALG00000010565	rnaseh1	99	79.801	Monopterus_albus
ENSHBUG00000004666	rnaseh1	87	55.224	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	54.851	Mus_caroli
ENSHBUG00000004666	rnaseh1	87	55.597	ENSMUSG00000020630	Rnaseh1	89	55.224	Mus_musculus
ENSHBUG00000004666	rnaseh1	87	54.851	MGP_PahariEiJ_G0029418	Rnaseh1	89	55.224	Mus_pahari
ENSHBUG00000004666	rnaseh1	87	55.224	MGP_SPRETEiJ_G0018502	Rnaseh1	89	54.851	Mus_spretus
ENSHBUG00000004666	rnaseh1	87	55.311	ENSNGAG00000015966	Rnaseh1	84	55.556	Nannospalax_galili
ENSHBUG00000004666	rnaseh1	100	96.764	ENSNBRG00000008739	rnaseh1	100	96.764	Neolamprologus_brichardi
ENSHBUG00000004666	rnaseh1	87	49.630	ENSNLEG00000015400	RNASEH1	87	48.519	Nomascus_leucogenys
ENSHBUG00000004666	rnaseh1	80	48.790	ENSNLEG00000000059	-	88	47.581	Nomascus_leucogenys
ENSHBUG00000004666	rnaseh1	73	42.358	ENSMEUG00000003610	-	99	35.354	Notamacropus_eugenii
ENSHBUG00000004666	rnaseh1	88	54.044	ENSOPRG00000005072	RNASEH1	90	52.708	Ochotona_princeps
ENSHBUG00000004666	rnaseh1	91	53.846	ENSODEG00000000235	Rnaseh1	92	53.147	Octodon_degus
ENSHBUG00000004666	rnaseh1	90	96.043	ENSONIG00000018697	rnaseh1	100	96.043	Oreochromis_niloticus
ENSHBUG00000004666	rnaseh1	94	51.701	ENSOCUG00000006117	RNASEH1	95	52.414	Oryctolagus_cuniculus
ENSHBUG00000004666	rnaseh1	90	76.703	ENSORLG00000018127	rnaseh1	98	75.627	Oryzias_latipes
ENSHBUG00000004666	rnaseh1	97	74.751	ENSORLG00020013660	rnaseh1	98	73.754	Oryzias_latipes_hni
ENSHBUG00000004666	rnaseh1	97	73.754	ENSORLG00015011338	rnaseh1	98	73.754	Oryzias_latipes_hsok
ENSHBUG00000004666	rnaseh1	88	70.909	ENSOMEG00000004710	rnaseh1	99	70.588	Oryzias_melastigma
ENSHBUG00000004666	rnaseh1	95	51.014	ENSOGAG00000017176	RNASEH1	98	51.014	Otolemur_garnettii
ENSHBUG00000004666	rnaseh1	96	47.231	ENSOARG00000005386	RNASEH1	99	46.906	Ovis_aries
ENSHBUG00000004666	rnaseh1	87	55.556	ENSPPAG00000034221	RNASEH1	89	54.815	Pan_paniscus
ENSHBUG00000004666	rnaseh1	94	52.881	ENSPPRG00000015513	RNASEH1	98	52.542	Panthera_pardus
ENSHBUG00000004666	rnaseh1	81	55.200	ENSPTIG00000019034	RNASEH1	83	55.200	Panthera_tigris_altaica
ENSHBUG00000004666	rnaseh1	87	55.556	ENSPTRG00000011614	RNASEH1	89	54.815	Pan_troglodytes
ENSHBUG00000004666	rnaseh1	88	45.520	ENSPTRG00000043403	-	97	45.520	Pan_troglodytes
ENSHBUG00000004666	rnaseh1	87	49.627	ENSPANG00000018246	-	88	49.254	Papio_anubis
ENSHBUG00000004666	rnaseh1	87	54.815	ENSPANG00000000443	RNASEH1	97	54.331	Papio_anubis
ENSHBUG00000004666	rnaseh1	89	59.431	ENSPKIG00000003146	rnaseh1	99	59.091	Paramormyrops_kingsleyae
ENSHBUG00000004666	rnaseh1	87	55.109	ENSPSIG00000002937	RNASEH1	99	53.875	Pelodiscus_sinensis
ENSHBUG00000004666	rnaseh1	96	61.667	ENSPMGG00000017463	rnaseh1	99	62.034	Periophthalmus_magnuspinnatus
ENSHBUG00000004666	rnaseh1	87	54.478	ENSPEMG00000022465	-	89	54.444	Peromyscus_maniculatus_bairdii
ENSHBUG00000004666	rnaseh1	52	38.037	ENSPCIG00000026047	-	87	37.013	Phascolarctos_cinereus
ENSHBUG00000004666	rnaseh1	96	51.178	ENSPCIG00000023334	-	98	51.178	Phascolarctos_cinereus
ENSHBUG00000004666	rnaseh1	97	72.333	ENSPFOG00000002841	rnaseh1	100	72.000	Poecilia_formosa
ENSHBUG00000004666	rnaseh1	72	57.709	ENSPLAG00000021349	-	85	57.269	Poecilia_latipinna
ENSHBUG00000004666	rnaseh1	97	72.667	ENSPMEG00000016826	rnaseh1	100	72.333	Poecilia_mexicana
ENSHBUG00000004666	rnaseh1	97	71.895	ENSPREG00000012197	rnaseh1	100	71.569	Poecilia_reticulata
ENSHBUG00000004666	rnaseh1	87	46.667	ENSPPYG00000025873	RNASEH1	88	46.296	Pongo_abelii
ENSHBUG00000004666	rnaseh1	80	50.400	ENSPPYG00000008067	-	90	50.400	Pongo_abelii
ENSHBUG00000004666	rnaseh1	88	54.244	ENSPCAG00000002500	RNASEH1	90	54.244	Procavia_capensis
ENSHBUG00000004666	rnaseh1	87	49.451	ENSPCOG00000019444	RNASEH1	89	48.529	Propithecus_coquereli
ENSHBUG00000004666	rnaseh1	96	48.505	ENSPVAG00000002070	RNASEH1	99	48.505	Pteropus_vampyrus
ENSHBUG00000004666	rnaseh1	100	97.411	ENSPNYG00000001292	rnaseh1	100	97.411	Pundamilia_nyererei
ENSHBUG00000004666	rnaseh1	96	64.120	ENSPNAG00000022344	rnaseh1	99	62.791	Pygocentrus_nattereri
ENSHBUG00000004666	rnaseh1	95	50.000	ENSRNOG00000008584	Rnaseh1	97	52.577	Rattus_norvegicus
ENSHBUG00000004666	rnaseh1	87	55.185	ENSRBIG00000034222	RNASEH1	88	55.185	Rhinopithecus_bieti
ENSHBUG00000004666	rnaseh1	87	55.185	ENSRROG00000041761	RNASEH1	88	55.185	Rhinopithecus_roxellana
ENSHBUG00000004666	rnaseh1	89	52.000	YMR234W	-	87	52.000	Saccharomyces_cerevisiae
ENSHBUG00000004666	rnaseh1	87	54.745	ENSSBOG00000025411	RNASEH1	89	54.745	Saimiri_boliviensis_boliviensis
ENSHBUG00000004666	rnaseh1	96	51.163	ENSSHAG00000013051	RNASEH1	97	50.671	Sarcophilus_harrisii
ENSHBUG00000004666	rnaseh1	96	59.032	ENSSFOG00015002709	rnaseh1	100	57.860	Scleropages_formosus
ENSHBUG00000004666	rnaseh1	99	76.299	ENSSMAG00000007586	rnaseh1	100	75.974	Scophthalmus_maximus
ENSHBUG00000004666	rnaseh1	98	79.605	ENSSDUG00000008217	rnaseh1	99	80.139	Seriola_dumerili
ENSHBUG00000004666	rnaseh1	83	79.845	ENSSLDG00000000442	rnaseh1	95	79.845	Seriola_lalandi_dorsalis
ENSHBUG00000004666	rnaseh1	88	55.594	ENSSPUG00000006644	RNASEH1	93	55.245	Sphenodon_punctatus
ENSHBUG00000004666	rnaseh1	99	81.759	ENSSPAG00000009353	rnaseh1	100	81.759	Stegastes_partitus
ENSHBUG00000004666	rnaseh1	88	54.982	ENSSSCG00000025305	RNASEH1	99	51.342	Sus_scrofa
ENSHBUG00000004666	rnaseh1	88	54.737	ENSTGUG00000012980	RNASEH1	93	56.028	Taeniopygia_guttata
ENSHBUG00000004666	rnaseh1	96	73.422	ENSTRUG00000015774	rnaseh1	99	74.912	Takifugu_rubripes
ENSHBUG00000004666	rnaseh1	89	78.700	ENSTNIG00000010715	rnaseh1	97	78.700	Tetraodon_nigroviridis
ENSHBUG00000004666	rnaseh1	96	49.000	ENSTTRG00000001615	RNASEH1	99	49.667	Tursiops_truncatus
ENSHBUG00000004666	rnaseh1	68	53.052	ENSUMAG00000003941	RNASEH1	65	53.052	Ursus_maritimus
ENSHBUG00000004666	rnaseh1	95	45.151	ENSVPAG00000011589	RNASEH1	99	45.151	Vicugna_pacos
ENSHBUG00000004666	rnaseh1	94	51.678	ENSVVUG00000008633	RNASEH1	88	51.678	Vulpes_vulpes
ENSHBUG00000004666	rnaseh1	66	51.899	ENSXETG00000030371	-	97	52.980	Xenopus_tropicalis
ENSHBUG00000004666	rnaseh1	96	50.831	ENSXETG00000001212	rnaseh1	99	52.980	Xenopus_tropicalis
ENSHBUG00000004666	rnaseh1	96	74.247	ENSXMAG00000002357	rnaseh1	99	73.913	Xiphophorus_maculatus