EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005077 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12943 bases
Position: chrJH425433.1:335673-348615
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023939	XRN_N	PF03159.18	1.1e-88	1	1
ENSHBUP00000003752	XRN_N	PF03159.18	9.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009823	-	1620	-	ENSHBUP00000023939	539 (aa)	-	-
ENSHBUT00000009855	-	294	-	ENSHBUP00000003752	97 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005077	xrn2	96	75.833	ENSG00000088930	XRN2	54	74.280	Homo_sapiens
ENSHBUG00000005077	xrn2	94	89.403	ENSAPOG00000009818	xrn2	53	89.403	Acanthochromis_polyacanthus
ENSHBUG00000005077	xrn2	96	76.667	ENSAMEG00000012581	XRN2	54	74.664	Ailuropoda_melanoleuca
ENSHBUG00000005077	xrn2	95	89.464	ENSACIG00000015047	xrn2	95	89.464	Amphilophus_citrinellus
ENSHBUG00000005077	xrn2	94	90.366	ENSAOCG00000023632	xrn2	53	90.366	Amphiprion_ocellaris
ENSHBUG00000005077	xrn2	94	90.173	ENSAPEG00000014871	xrn2	53	90.173	Amphiprion_percula
ENSHBUG00000005077	xrn2	94	88.697	ENSATEG00000001273	xrn2	54	88.697	Anabas_testudineus
ENSHBUG00000005077	xrn2	77	97.333	ENSAPLG00000013869	XRN2	53	73.535	Anas_platyrhynchos
ENSHBUG00000005077	xrn2	77	98.667	ENSACAG00000005565	XRN2	54	73.282	Anolis_carolinensis
ENSHBUG00000005077	xrn2	96	75.833	ENSANAG00000020126	XRN2	56	74.664	Aotus_nancymaae
ENSHBUG00000005077	xrn2	100	100.000	ENSACLG00000010522	xrn2	100	100.000	Astatotilapia_calliptera
ENSHBUG00000005077	xrn2	94	83.748	ENSAMXG00000018301	xrn2	54	83.748	Astyanax_mexicanus
ENSHBUG00000005077	xrn2	96	76.667	ENSBTAG00000011304	XRN2	55	74.856	Bos_taurus
ENSHBUG00000005077	xrn2	96	66.667	WBGene00006964	xrn-2	56	53.047	Caenorhabditis_elegans
ENSHBUG00000005077	xrn2	96	75.833	ENSCJAG00000005611	XRN2	56	74.664	Callithrix_jacchus
ENSHBUG00000005077	xrn2	77	98.667	ENSCAFG00000005185	XRN2	54	74.664	Canis_familiaris
ENSHBUG00000005077	xrn2	96	76.667	ENSCAFG00020027479	XRN2	54	74.664	Canis_lupus_dingo
ENSHBUG00000005077	xrn2	96	75.833	ENSCHIG00000006921	XRN2	54	73.896	Capra_hircus
ENSHBUG00000005077	xrn2	96	76.667	ENSTSYG00000008315	XRN2	54	75.048	Carlito_syrichta
ENSHBUG00000005077	xrn2	96	76.667	ENSCPOG00000009407	XRN2	54	74.664	Cavia_porcellus
ENSHBUG00000005077	xrn2	96	75.833	ENSCATG00000040350	XRN2	54	74.280	Cercocebus_atys
ENSHBUG00000005077	xrn2	96	76.667	ENSCLAG00000013419	XRN2	54	74.856	Chinchilla_lanigera
ENSHBUG00000005077	xrn2	96	75.833	ENSCSAG00000011094	XRN2	54	74.280	Chlorocebus_sabaeus
ENSHBUG00000005077	xrn2	77	98.667	ENSCPBG00000023533	XRN2	54	75.526	Chrysemys_picta_bellii
ENSHBUG00000005077	xrn2	96	68.333	ENSCING00000022336	-	61	63.289	Ciona_intestinalis
ENSHBUG00000005077	xrn2	96	68.067	ENSCSAVG00000011217	-	94	64.026	Ciona_savignyi
ENSHBUG00000005077	xrn2	96	75.833	ENSCANG00000040240	XRN2	54	74.280	Colobus_angolensis_palliatus
ENSHBUG00000005077	xrn2	96	76.667	ENSCGRG00001010676	Xrn2	55	75.432	Cricetulus_griseus_chok1gshd
ENSHBUG00000005077	xrn2	77	98.667	ENSCGRG00000006378	Xrn2	52	74.545	Cricetulus_griseus_crigri
ENSHBUG00000005077	xrn2	96	77.500	ENSCSEG00000005628	xrn2	99	76.938	Cynoglossus_semilaevis
ENSHBUG00000005077	xrn2	94	88.462	ENSCVAG00000018999	xrn2	97	88.462	Cyprinodon_variegatus
ENSHBUG00000005077	xrn2	97	83.490	ENSDARG00000101900	xrn2	98	83.490	Danio_rerio
ENSHBUG00000005077	xrn2	96	76.667	ENSDNOG00000001895	XRN2	54	74.280	Dasypus_novemcinctus
ENSHBUG00000005077	xrn2	96	76.667	ENSDORG00000005434	Xrn2	55	74.472	Dipodomys_ordii
ENSHBUG00000005077	xrn2	96	71.901	FBgn0031868	Rat1	52	60.797	Drosophila_melanogaster
ENSHBUG00000005077	xrn2	77	96.000	ENSEBUG00000016136	xrn2	67	67.145	Eptatretus_burgeri
ENSHBUG00000005077	xrn2	96	76.667	ENSEASG00005002484	XRN2	54	74.664	Equus_asinus_asinus
ENSHBUG00000005077	xrn2	85	92.308	ENSECAG00000018988	XRN2	55	73.408	Equus_caballus
ENSHBUG00000005077	xrn2	94	84.291	ENSELUG00000000552	xrn2	53	84.291	Esox_lucius
ENSHBUG00000005077	xrn2	96	76.667	ENSFCAG00000007970	XRN2	56	74.664	Felis_catus
ENSHBUG00000005077	xrn2	96	75.833	ENSFALG00000004508	XRN2	54	74.566	Ficedula_albicollis
ENSHBUG00000005077	xrn2	96	76.667	ENSFDAG00000016311	XRN2	54	74.472	Fukomys_damarensis
ENSHBUG00000005077	xrn2	99	89.899	ENSFHEG00000013039	xrn2	98	89.899	Fundulus_heteroclitus
ENSHBUG00000005077	xrn2	95	76.967	ENSGMOG00000013436	xrn2	61	76.967	Gadus_morhua
ENSHBUG00000005077	xrn2	96	75.833	ENSGALG00000008372	XRN2	54	73.796	Gallus_gallus
ENSHBUG00000005077	xrn2	94	87.548	ENSGAFG00000014284	xrn2	92	84.672	Gambusia_affinis
ENSHBUG00000005077	xrn2	94	84.720	ENSGACG00000011870	xrn2	96	84.526	Gasterosteus_aculeatus
ENSHBUG00000005077	xrn2	96	76.667	ENSGAGG00000004884	XRN2	54	75.143	Gopherus_agassizii
ENSHBUG00000005077	xrn2	96	75.833	ENSGGOG00000013738	XRN2	54	74.280	Gorilla_gorilla
ENSHBUG00000005077	xrn2	96	76.667	ENSHGLG00000014831	XRN2	53	72.745	Heterocephalus_glaber_female
ENSHBUG00000005077	xrn2	96	76.667	ENSHGLG00100013130	XRN2	53	72.745	Heterocephalus_glaber_male
ENSHBUG00000005077	xrn2	94	85.577	ENSHCOG00000011994	xrn2	53	85.769	Hippocampus_comes
ENSHBUG00000005077	xrn2	94	83.939	ENSIPUG00000006639	xrn2	54	83.939	Ictalurus_punctatus
ENSHBUG00000005077	xrn2	96	76.667	ENSSTOG00000000589	XRN2	54	74.472	Ictidomys_tridecemlineatus
ENSHBUG00000005077	xrn2	96	76.667	ENSJJAG00000022128	Xrn2	54	75.240	Jaculus_jaculus
ENSHBUG00000005077	xrn2	81	81.250	ENSKMAG00000002078	-	96	87.736	Kryptolebias_marmoratus
ENSHBUG00000005077	xrn2	100	91.919	ENSLBEG00000010041	xrn2	99	91.919	Labrus_bergylta
ENSHBUG00000005077	xrn2	77	98.667	ENSLACG00000008307	XRN2	61	74.951	Latimeria_chalumnae
ENSHBUG00000005077	xrn2	95	79.271	ENSLOCG00000016874	xrn2	55	79.274	Lepisosteus_oculatus
ENSHBUG00000005077	xrn2	96	76.667	ENSLAFG00000014624	XRN2	54	74.472	Loxodonta_africana
ENSHBUG00000005077	xrn2	96	75.833	ENSMFAG00000038122	XRN2	54	74.280	Macaca_fascicularis
ENSHBUG00000005077	xrn2	96	75.833	ENSMMUG00000011405	XRN2	54	74.280	Macaca_mulatta
ENSHBUG00000005077	xrn2	96	75.833	ENSMNEG00000040626	XRN2	54	74.280	Macaca_nemestrina
ENSHBUG00000005077	xrn2	96	75.833	ENSMLEG00000041897	XRN2	54	74.088	Mandrillus_leucophaeus
ENSHBUG00000005077	xrn2	94	88.506	ENSMAMG00000008633	xrn2	54	88.506	Mastacembelus_armatus
ENSHBUG00000005077	xrn2	100	99.072	ENSMZEG00005022362	xrn2	100	99.072	Maylandia_zebra
ENSHBUG00000005077	xrn2	96	75.207	ENSMGAG00000003196	XRN2	54	72.849	Meleagris_gallopavo
ENSHBUG00000005077	xrn2	96	76.667	ENSMAUG00000021842	Xrn2	54	74.664	Mesocricetus_auratus
ENSHBUG00000005077	xrn2	96	76.667	ENSMICG00000008126	XRN2	54	74.856	Microcebus_murinus
ENSHBUG00000005077	xrn2	96	76.667	ENSMOCG00000012588	Xrn2	54	74.280	Microtus_ochrogaster
ENSHBUG00000005077	xrn2	94	86.973	ENSMMOG00000017576	xrn2	95	83.269	Mola_mola
ENSHBUG00000005077	xrn2	96	76.667	ENSMODG00000006163	XRN2	54	74.856	Monodelphis_domestica
ENSHBUG00000005077	xrn2	94	88.269	ENSMALG00000011355	xrn2	94	88.269	Monopterus_albus
ENSHBUG00000005077	xrn2	96	76.667	MGP_CAROLIEiJ_G0024400	Xrn2	54	74.664	Mus_caroli
ENSHBUG00000005077	xrn2	96	76.667	ENSMUSG00000027433	Xrn2	54	74.664	Mus_musculus
ENSHBUG00000005077	xrn2	96	76.667	MGP_PahariEiJ_G0025843	Xrn2	54	74.664	Mus_pahari
ENSHBUG00000005077	xrn2	96	76.667	MGP_SPRETEiJ_G0025318	Xrn2	54	74.664	Mus_spretus
ENSHBUG00000005077	xrn2	96	76.667	ENSMLUG00000001536	XRN2	54	74.808	Myotis_lucifugus
ENSHBUG00000005077	xrn2	96	76.667	ENSNGAG00000018138	Xrn2	54	74.856	Nannospalax_galili
ENSHBUG00000005077	xrn2	100	100.000	ENSNBRG00000008062	xrn2	100	100.000	Neolamprologus_brichardi
ENSHBUG00000005077	xrn2	96	75.833	ENSNLEG00000009991	XRN2	54	74.280	Nomascus_leucogenys
ENSHBUG00000005077	xrn2	96	75.833	ENSODEG00000010745	-	54	74.664	Octodon_degus
ENSHBUG00000005077	xrn2	92	67.913	ENSODEG00000000860	-	54	67.323	Octodon_degus
ENSHBUG00000005077	xrn2	94	94.798	ENSONIG00000018720	xrn2	51	94.798	Oreochromis_niloticus
ENSHBUG00000005077	xrn2	96	75.833	ENSOANG00000015673	XRN2	54	74.088	Ornithorhynchus_anatinus
ENSHBUG00000005077	xrn2	96	76.667	ENSOCUG00000013468	XRN2	54	74.664	Oryctolagus_cuniculus
ENSHBUG00000005077	xrn2	94	87.931	ENSORLG00000017213	xrn2	59	87.931	Oryzias_latipes
ENSHBUG00000005077	xrn2	94	87.931	ENSORLG00020001824	xrn2	54	87.931	Oryzias_latipes_hni
ENSHBUG00000005077	xrn2	94	87.548	ENSORLG00015019747	xrn2	54	87.548	Oryzias_latipes_hsok
ENSHBUG00000005077	xrn2	94	87.165	ENSOMEG00000019820	xrn2	53	87.165	Oryzias_melastigma
ENSHBUG00000005077	xrn2	96	76.667	ENSOGAG00000001068	XRN2	54	74.664	Otolemur_garnettii
ENSHBUG00000005077	xrn2	77	97.333	ENSOARG00000004443	XRN2	52	72.929	Ovis_aries
ENSHBUG00000005077	xrn2	96	75.833	ENSPPAG00000033549	XRN2	54	74.280	Pan_paniscus
ENSHBUG00000005077	xrn2	96	76.667	ENSPPRG00000008732	XRN2	54	74.664	Panthera_pardus
ENSHBUG00000005077	xrn2	77	98.667	ENSPTIG00000015683	XRN2	51	73.737	Panthera_tigris_altaica
ENSHBUG00000005077	xrn2	96	75.833	ENSPTRG00000013308	XRN2	54	74.280	Pan_troglodytes
ENSHBUG00000005077	xrn2	96	75.833	ENSPANG00000018088	XRN2	54	74.280	Papio_anubis
ENSHBUG00000005077	xrn2	94	80.460	ENSPKIG00000016889	xrn2	54	80.460	Paramormyrops_kingsleyae
ENSHBUG00000005077	xrn2	68	98.485	ENSPSIG00000014666	XRN2	60	74.200	Pelodiscus_sinensis
ENSHBUG00000005077	xrn2	96	76.667	ENSPEMG00000000111	Xrn2	54	74.472	Peromyscus_maniculatus_bairdii
ENSHBUG00000005077	xrn2	59	67.847	ENSPMAG00000002576	xrn2	99	67.847	Petromyzon_marinus
ENSHBUG00000005077	xrn2	94	86.973	ENSPFOG00000004182	xrn2	54	86.973	Poecilia_formosa
ENSHBUG00000005077	xrn2	94	87.165	ENSPLAG00000007351	xrn2	58	87.165	Poecilia_latipinna
ENSHBUG00000005077	xrn2	84	86.111	ENSPMEG00000011798	xrn2	51	86.111	Poecilia_mexicana
ENSHBUG00000005077	xrn2	94	87.739	ENSPREG00000012452	xrn2	58	87.739	Poecilia_reticulata
ENSHBUG00000005077	xrn2	96	75.833	ENSPPYG00000010755	XRN2	54	74.280	Pongo_abelii
ENSHBUG00000005077	xrn2	96	76.667	ENSPCAG00000011191	XRN2	54	74.280	Procavia_capensis
ENSHBUG00000005077	xrn2	96	75.833	ENSPCOG00000016468	XRN2	52	66.027	Propithecus_coquereli
ENSHBUG00000005077	xrn2	100	96.475	ENSPNYG00000001765	xrn2	100	96.475	Pundamilia_nyererei
ENSHBUG00000005077	xrn2	94	82.218	ENSPNAG00000010956	xrn2	54	82.218	Pygocentrus_nattereri
ENSHBUG00000005077	xrn2	96	76.667	ENSRNOG00000011785	Xrn2	54	74.664	Rattus_norvegicus
ENSHBUG00000005077	xrn2	96	75.833	ENSRBIG00000036193	XRN2	63	74.280	Rhinopithecus_bieti
ENSHBUG00000005077	xrn2	96	75.833	ENSSBOG00000021014	XRN2	54	74.664	Saimiri_boliviensis_boliviensis
ENSHBUG00000005077	xrn2	94	83.174	ENSSFOG00015001091	xrn2	54	83.174	Scleropages_formosus
ENSHBUG00000005077	xrn2	94	88.269	ENSSMAG00000007834	xrn2	53	88.269	Scophthalmus_maximus
ENSHBUG00000005077	xrn2	94	90.192	ENSSDUG00000012802	xrn2	59	90.192	Seriola_dumerili
ENSHBUG00000005077	xrn2	94	89.272	ENSSLDG00000021273	xrn2	59	89.272	Seriola_lalandi_dorsalis
ENSHBUG00000005077	xrn2	96	75.000	ENSSPUG00000005485	XRN2	54	75.908	Sphenodon_punctatus
ENSHBUG00000005077	xrn2	94	89.788	ENSSPAG00000016027	xrn2	53	89.788	Stegastes_partitus
ENSHBUG00000005077	xrn2	96	76.667	ENSSSCG00000007109	XRN2	55	74.664	Sus_scrofa
ENSHBUG00000005077	xrn2	94	72.275	ENSTGUG00000007535	XRN2	54	72.275	Taeniopygia_guttata
ENSHBUG00000005077	xrn2	94	85.249	ENSTRUG00000015489	xrn2	53	85.249	Takifugu_rubripes
ENSHBUG00000005077	xrn2	94	83.877	ENSTNIG00000010712	xrn2	54	83.877	Tetraodon_nigroviridis
ENSHBUG00000005077	xrn2	96	76.667	ENSTBEG00000004119	XRN2	54	74.856	Tupaia_belangeri
ENSHBUG00000005077	xrn2	96	76.667	ENSTTRG00000009087	XRN2	54	73.704	Tursiops_truncatus
ENSHBUG00000005077	xrn2	96	76.667	ENSUAMG00000024634	XRN2	50	82.238	Ursus_americanus
ENSHBUG00000005077	xrn2	77	98.667	ENSUMAG00000004012	XRN2	50	73.737	Ursus_maritimus
ENSHBUG00000005077	xrn2	96	76.667	ENSVVUG00000012178	XRN2	54	74.664	Vulpes_vulpes
ENSHBUG00000005077	xrn2	96	76.667	ENSXETG00000023501	xrn2	54	76.967	Xenopus_tropicalis
ENSHBUG00000005077	xrn2	94	87.548	ENSXMAG00000000242	xrn2	92	84.915	Xiphophorus_maculatus