EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005216 (Gene tree)
Gene ID: 102310451
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 14687 bases
Position: chrJH425415.1:1355067-1369753
Accession: 102310451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000023991	TUDOR	PF00567.24	1.2e-109	1	4
ENSHBUP00000023991	TUDOR	PF00567.24	1.2e-109	2	4
ENSHBUP00000023991	TUDOR	PF00567.24	1.2e-109	3	4
ENSHBUP00000023991	TUDOR	PF00567.24	1.2e-109	4	4
ENSHBUP00000003886	TUDOR	PF00567.24	1.7e-109	1	4
ENSHBUP00000003886	TUDOR	PF00567.24	1.7e-109	2	4
ENSHBUP00000003886	TUDOR	PF00567.24	1.7e-109	3	4
ENSHBUP00000003886	TUDOR	PF00567.24	1.7e-109	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009626	-	5218	XM_005928165	ENSHBUP00000003886	1195 (aa)	XP_005928227	UPI0003BD018D
ENSHBUT00000009682	-	3390	-	ENSHBUP00000023991	1129 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005216	tdrd1	80	30.366	ENSHBUG00000000351	-	68	30.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005216	tdrd1	86	33.333	ENSG00000095627	TDRD1	85	34.420	Homo_sapiens
ENSHBUG00000005216	tdrd1	98	66.724	ENSAPOG00000023199	tdrd1	99	66.984	Acanthochromis_polyacanthus
ENSHBUG00000005216	tdrd1	84	33.842	ENSAMEG00000015182	TDRD1	85	33.842	Ailuropoda_melanoleuca
ENSHBUG00000005216	tdrd1	98	76.161	ENSACIG00000010576	tdrd1	96	78.700	Amphilophus_citrinellus
ENSHBUG00000005216	tdrd1	99	75.648	ENSAOCG00000007059	tdrd1	100	75.773	Amphiprion_ocellaris
ENSHBUG00000005216	tdrd1	99	67.393	ENSAPEG00000017049	tdrd1	99	67.393	Amphiprion_percula
ENSHBUG00000005216	tdrd1	95	66.034	ENSATEG00000021627	tdrd1	96	67.054	Anabas_testudineus
ENSHBUG00000005216	tdrd1	83	32.317	ENSAPLG00000012609	TDRD1	93	32.971	Anas_platyrhynchos
ENSHBUG00000005216	tdrd1	82	32.657	ENSACAG00000009854	TDRD1	83	32.657	Anolis_carolinensis
ENSHBUG00000005216	tdrd1	81	35.152	ENSANAG00000035710	TDRD1	82	35.152	Aotus_nancymaae
ENSHBUG00000005216	tdrd1	99	98.147	ENSACLG00000014107	tdrd1	100	98.147	Astatotilapia_calliptera
ENSHBUG00000005216	tdrd1	99	44.765	ENSAMXG00000015146	tdrd1	100	44.765	Astyanax_mexicanus
ENSHBUG00000005216	tdrd1	82	32.971	ENSBTAG00000006855	TDRD1	87	32.971	Bos_taurus
ENSHBUG00000005216	tdrd1	81	35.251	ENSCJAG00000019270	TDRD1	82	35.251	Callithrix_jacchus
ENSHBUG00000005216	tdrd1	84	33.107	ENSCAFG00000011266	TDRD1	87	33.107	Canis_familiaris
ENSHBUG00000005216	tdrd1	90	33.514	ENSCAFG00020012373	TDRD1	87	33.107	Canis_lupus_dingo
ENSHBUG00000005216	tdrd1	82	33.841	ENSCHIG00000012766	TDRD1	88	33.432	Capra_hircus
ENSHBUG00000005216	tdrd1	82	32.859	ENSTSYG00000004935	TDRD1	80	34.049	Carlito_syrichta
ENSHBUG00000005216	tdrd1	84	33.807	ENSCPOG00000004190	TDRD1	83	33.807	Cavia_porcellus
ENSHBUG00000005216	tdrd1	88	34.732	ENSCCAG00000027375	TDRD1	83	34.732	Cebus_capucinus
ENSHBUG00000005216	tdrd1	85	32.375	ENSCATG00000035999	TDRD1	87	32.375	Cercocebus_atys
ENSHBUG00000005216	tdrd1	84	32.577	ENSCLAG00000003935	TDRD1	83	32.972	Chinchilla_lanigera
ENSHBUG00000005216	tdrd1	84	33.269	ENSCSAG00000005071	TDRD1	84	33.269	Chlorocebus_sabaeus
ENSHBUG00000005216	tdrd1	88	45.775	ENSCHOG00000001690	TDRD1	73	45.775	Choloepus_hoffmanni
ENSHBUG00000005216	tdrd1	84	34.871	ENSCPBG00000003780	TDRD1	83	35.380	Chrysemys_picta_bellii
ENSHBUG00000005216	tdrd1	84	33.010	ENSCANG00000035172	TDRD1	84	33.949	Colobus_angolensis_palliatus
ENSHBUG00000005216	tdrd1	91	34.788	ENSCGRG00001004632	Tdrd1	86	34.744	Cricetulus_griseus_chok1gshd
ENSHBUG00000005216	tdrd1	84	33.366	ENSCGRG00000004981	Tdrd1	84	33.366	Cricetulus_griseus_crigri
ENSHBUG00000005216	tdrd1	91	53.143	ENSCSEG00000006983	tdrd1	98	52.372	Cynoglossus_semilaevis
ENSHBUG00000005216	tdrd1	88	59.222	ENSCVAG00000020980	tdrd1	99	59.222	Cyprinodon_variegatus
ENSHBUG00000005216	tdrd1	97	44.287	ENSDARG00000007465	tdrd1	99	44.287	Danio_rerio
ENSHBUG00000005216	tdrd1	80	33.265	ENSDNOG00000012114	TDRD1	80	33.571	Dasypus_novemcinctus
ENSHBUG00000005216	tdrd1	82	33.598	ENSDORG00000009986	Tdrd1	84	33.598	Dipodomys_ordii
ENSHBUG00000005216	tdrd1	89	30.300	ENSETEG00000020143	TDRD1	85	30.300	Echinops_telfairi
ENSHBUG00000005216	tdrd1	82	33.399	ENSEASG00005014802	TDRD1	87	33.399	Equus_asinus_asinus
ENSHBUG00000005216	tdrd1	82	37.368	ENSECAG00000009748	TDRD1	84	37.013	Equus_caballus
ENSHBUG00000005216	tdrd1	82	31.727	ENSEEUG00000010076	TDRD1	80	32.032	Erinaceus_europaeus
ENSHBUG00000005216	tdrd1	99	46.316	ENSELUG00000024364	tdrd1	99	46.316	Esox_lucius
ENSHBUG00000005216	tdrd1	83	33.717	ENSFCAG00000000632	TDRD1	84	32.950	Felis_catus
ENSHBUG00000005216	tdrd1	78	33.581	ENSFALG00000002237	TDRD1	88	33.730	Ficedula_albicollis
ENSHBUG00000005216	tdrd1	84	33.399	ENSFDAG00000013225	TDRD1	86	33.108	Fukomys_damarensis
ENSHBUG00000005216	tdrd1	96	47.690	ENSFHEG00000009203	tdrd1	99	47.690	Fundulus_heteroclitus
ENSHBUG00000005216	tdrd1	77	53.608	ENSGMOG00000016797	-	68	53.608	Gadus_morhua
ENSHBUG00000005216	tdrd1	83	30.832	ENSGALG00000046180	TDRD1	89	31.621	Gallus_gallus
ENSHBUG00000005216	tdrd1	99	55.900	ENSGAFG00000002668	tdrd1	100	56.067	Gambusia_affinis
ENSHBUG00000005216	tdrd1	80	66.308	ENSGACG00000006590	tdrd1	100	66.308	Gasterosteus_aculeatus
ENSHBUG00000005216	tdrd1	86	33.115	ENSGGOG00000004250	TDRD1	86	33.115	Gorilla_gorilla
ENSHBUG00000005216	tdrd1	84	30.716	ENSHGLG00000010877	TDRD1	88	30.494	Heterocephalus_glaber_female
ENSHBUG00000005216	tdrd1	81	33.575	ENSHGLG00100013857	TDRD1	87	33.575	Heterocephalus_glaber_male
ENSHBUG00000005216	tdrd1	96	46.408	ENSHCOG00000002840	tdrd1	95	46.915	Hippocampus_comes
ENSHBUG00000005216	tdrd1	99	46.539	ENSIPUG00000017232	tdrd1	100	46.539	Ictalurus_punctatus
ENSHBUG00000005216	tdrd1	89	31.964	ENSSTOG00000003221	TDRD1	90	31.964	Ictidomys_tridecemlineatus
ENSHBUG00000005216	tdrd1	82	34.359	ENSJJAG00000014720	Tdrd1	83	34.359	Jaculus_jaculus
ENSHBUG00000005216	tdrd1	91	64.122	ENSKMAG00000018558	tdrd1	99	64.122	Kryptolebias_marmoratus
ENSHBUG00000005216	tdrd1	99	66.667	ENSLBEG00000004161	tdrd1	99	66.528	Labrus_bergylta
ENSHBUG00000005216	tdrd1	83	35.056	ENSLACG00000011559	TDRD1	83	35.095	Latimeria_chalumnae
ENSHBUG00000005216	tdrd1	99	39.453	ENSLOCG00000012030	tdrd1	100	43.060	Lepisosteus_oculatus
ENSHBUG00000005216	tdrd1	78	34.295	ENSLAFG00000011575	TDRD1	93	34.295	Loxodonta_africana
ENSHBUG00000005216	tdrd1	84	32.784	ENSMFAG00000043487	TDRD1	85	32.784	Macaca_fascicularis
ENSHBUG00000005216	tdrd1	84	32.784	ENSMMUG00000022517	TDRD1	84	33.709	Macaca_mulatta
ENSHBUG00000005216	tdrd1	84	32.881	ENSMNEG00000031108	TDRD1	85	32.881	Macaca_nemestrina
ENSHBUG00000005216	tdrd1	84	32.687	ENSMLEG00000032281	TDRD1	84	33.607	Mandrillus_leucophaeus
ENSHBUG00000005216	tdrd1	98	64.716	ENSMAMG00000015287	tdrd1	99	64.716	Mastacembelus_armatus
ENSHBUG00000005216	tdrd1	99	98.564	ENSMZEG00005025315	tdrd1	100	98.564	Maylandia_zebra
ENSHBUG00000005216	tdrd1	82	31.753	ENSMGAG00000011067	TDRD1	99	32.150	Meleagris_gallopavo
ENSHBUG00000005216	tdrd1	84	36.140	ENSMAUG00000012164	Tdrd1	79	35.995	Mesocricetus_auratus
ENSHBUG00000005216	tdrd1	84	33.203	ENSMICG00000016190	TDRD1	85	32.823	Microcebus_murinus
ENSHBUG00000005216	tdrd1	84	33.069	ENSMOCG00000022360	Tdrd1	84	34.080	Microtus_ochrogaster
ENSHBUG00000005216	tdrd1	98	62.054	ENSMMOG00000014068	tdrd1	100	62.054	Mola_mola
ENSHBUG00000005216	tdrd1	85	34.294	ENSMODG00000009788	TDRD1	90	34.294	Monodelphis_domestica
ENSHBUG00000005216	tdrd1	98	63.936	ENSMALG00000022115	tdrd1	100	64.348	Monopterus_albus
ENSHBUG00000005216	tdrd1	84	33.814	MGP_CAROLIEiJ_G0023095	Tdrd1	85	33.910	Mus_caroli
ENSHBUG00000005216	tdrd1	83	34.597	ENSMUSG00000025081	Tdrd1	84	34.694	Mus_musculus
ENSHBUG00000005216	tdrd1	84	33.333	MGP_PahariEiJ_G0014583	Tdrd1	86	33.647	Mus_pahari
ENSHBUG00000005216	tdrd1	84	34.423	MGP_SPRETEiJ_G0024016	Tdrd1	85	34.519	Mus_spretus
ENSHBUG00000005216	tdrd1	84	32.531	ENSMPUG00000001987	TDRD1	85	32.531	Mustela_putorius_furo
ENSHBUG00000005216	tdrd1	82	33.634	ENSNGAG00000015231	Tdrd1	86	33.634	Nannospalax_galili
ENSHBUG00000005216	tdrd1	98	94.662	ENSNBRG00000017920	tdrd1	99	94.662	Neolamprologus_brichardi
ENSHBUG00000005216	tdrd1	84	31.460	ENSNLEG00000016228	TDRD1	82	33.229	Nomascus_leucogenys
ENSHBUG00000005216	tdrd1	84	32.296	ENSMEUG00000007717	TDRD1	83	32.296	Notamacropus_eugenii
ENSHBUG00000005216	tdrd1	84	33.075	ENSOPRG00000009180	TDRD1	84	33.075	Ochotona_princeps
ENSHBUG00000005216	tdrd1	84	32.207	ENSODEG00000011965	TDRD1	84	32.411	Octodon_degus
ENSHBUG00000005216	tdrd1	99	92.784	ENSONIG00000016382	tdrd1	100	92.784	Oreochromis_niloticus
ENSHBUG00000005216	tdrd1	82	33.671	ENSOANG00000001562	TDRD1	85	34.277	Ornithorhynchus_anatinus
ENSHBUG00000005216	tdrd1	84	33.595	ENSOCUG00000025327	TDRD1	87	33.589	Oryctolagus_cuniculus
ENSHBUG00000005216	tdrd1	98	53.496	ENSORLG00000004833	tdrd1	99	53.918	Oryzias_latipes
ENSHBUG00000005216	tdrd1	98	53.159	ENSORLG00020019231	tdrd1	99	53.159	Oryzias_latipes_hni
ENSHBUG00000005216	tdrd1	98	53.788	ENSORLG00015017184	tdrd1	99	53.788	Oryzias_latipes_hsok
ENSHBUG00000005216	tdrd1	99	54.419	ENSOMEG00000023637	tdrd1	99	55.021	Oryzias_melastigma
ENSHBUG00000005216	tdrd1	82	33.672	ENSOGAG00000001370	TDRD1	84	33.399	Otolemur_garnettii
ENSHBUG00000005216	tdrd1	82	33.536	ENSOARG00000014200	-	87	33.531	Ovis_aries
ENSHBUG00000005216	tdrd1	87	33.180	ENSPPAG00000041621	TDRD1	88	33.180	Pan_paniscus
ENSHBUG00000005216	tdrd1	83	33.438	ENSPPRG00000000191	TDRD1	84	32.698	Panthera_pardus
ENSHBUG00000005216	tdrd1	85	32.635	ENSPTIG00000010264	TDRD1	83	33.927	Panthera_tigris_altaica
ENSHBUG00000005216	tdrd1	86	33.240	ENSPTRG00000002958	TDRD1	86	33.240	Pan_troglodytes
ENSHBUG00000005216	tdrd1	84	32.590	ENSPANG00000020752	TDRD1	86	32.590	Papio_anubis
ENSHBUG00000005216	tdrd1	97	39.316	ENSPKIG00000010586	tdrd1	98	39.316	Paramormyrops_kingsleyae
ENSHBUG00000005216	tdrd1	89	34.841	ENSPSIG00000014655	TDRD1	86	34.841	Pelodiscus_sinensis
ENSHBUG00000005216	tdrd1	84	51.173	ENSPMGG00000018890	tdrd1	100	51.753	Periophthalmus_magnuspinnatus
ENSHBUG00000005216	tdrd1	84	34.582	ENSPEMG00000004582	Tdrd1	85	34.582	Peromyscus_maniculatus_bairdii
ENSHBUG00000005216	tdrd1	91	34.257	ENSPCIG00000009739	TDRD1	92	33.843	Phascolarctos_cinereus
ENSHBUG00000005216	tdrd1	91	57.573	ENSPFOG00000002145	tdrd1	100	57.573	Poecilia_formosa
ENSHBUG00000005216	tdrd1	99	56.773	ENSPLAG00000010241	tdrd1	100	56.773	Poecilia_latipinna
ENSHBUG00000005216	tdrd1	99	55.435	ENSPMEG00000021893	tdrd1	100	55.435	Poecilia_mexicana
ENSHBUG00000005216	tdrd1	99	56.856	ENSPREG00000022663	tdrd1	100	56.856	Poecilia_reticulata
ENSHBUG00000005216	tdrd1	86	32.863	ENSPPYG00000002671	TDRD1	86	32.863	Pongo_abelii
ENSHBUG00000005216	tdrd1	91	32.411	ENSPCAG00000006692	TDRD1	72	36.364	Procavia_capensis
ENSHBUG00000005216	tdrd1	84	33.170	ENSPCOG00000026619	TDRD1	82	33.750	Propithecus_coquereli
ENSHBUG00000005216	tdrd1	84	33.333	ENSPVAG00000003055	TDRD1	83	33.269	Pteropus_vampyrus
ENSHBUG00000005216	tdrd1	99	95.927	ENSPNYG00000001706	tdrd1	100	95.927	Pundamilia_nyererei
ENSHBUG00000005216	tdrd1	96	46.532	ENSPNAG00000005831	tdrd1	96	47.682	Pygocentrus_nattereri
ENSHBUG00000005216	tdrd1	88	33.426	ENSRNOG00000017064	Tdrd1	89	33.426	Rattus_norvegicus
ENSHBUG00000005216	tdrd1	83	33.810	ENSRBIG00000029668	TDRD1	87	33.810	Rhinopithecus_bieti
ENSHBUG00000005216	tdrd1	83	33.845	ENSRROG00000043379	TDRD1	84	33.845	Rhinopithecus_roxellana
ENSHBUG00000005216	tdrd1	82	33.909	ENSSBOG00000023561	TDRD1	82	34.801	Saimiri_boliviensis_boliviensis
ENSHBUG00000005216	tdrd1	85	35.322	ENSSHAG00000014311	TDRD1	90	35.260	Sarcophilus_harrisii
ENSHBUG00000005216	tdrd1	86	41.193	ENSSFOG00015022020	tdrd1	97	41.522	Scleropages_formosus
ENSHBUG00000005216	tdrd1	98	61.823	ENSSMAG00000019271	tdrd1	95	65.725	Scophthalmus_maximus
ENSHBUG00000005216	tdrd1	91	68.386	ENSSDUG00000022012	tdrd1	99	68.440	Seriola_dumerili
ENSHBUG00000005216	tdrd1	91	68.480	ENSSLDG00000006423	tdrd1	99	68.440	Seriola_lalandi_dorsalis
ENSHBUG00000005216	tdrd1	82	35.942	ENSSARG00000008828	TDRD1	70	35.942	Sorex_araneus
ENSHBUG00000005216	tdrd1	86	33.740	ENSSPUG00000005015	TDRD1	91	33.740	Sphenodon_punctatus
ENSHBUG00000005216	tdrd1	98	65.271	ENSSPAG00000018805	tdrd1	99	65.271	Stegastes_partitus
ENSHBUG00000005216	tdrd1	88	33.085	ENSSSCG00000021075	TDRD1	88	33.085	Sus_scrofa
ENSHBUG00000005216	tdrd1	78	33.630	ENSTGUG00000010905	TDRD1	93	33.778	Taeniopygia_guttata
ENSHBUG00000005216	tdrd1	88	56.676	ENSTRUG00000012142	tdrd1	100	57.931	Takifugu_rubripes
ENSHBUG00000005216	tdrd1	91	46.366	ENSTNIG00000018898	tdrd1	100	48.185	Tetraodon_nigroviridis
ENSHBUG00000005216	tdrd1	82	35.325	ENSTBEG00000014417	-	78	34.729	Tupaia_belangeri
ENSHBUG00000005216	tdrd1	84	31.675	ENSTTRG00000010147	TDRD1	87	31.675	Tursiops_truncatus
ENSHBUG00000005216	tdrd1	84	33.938	ENSUAMG00000009025	TDRD1	85	32.951	Ursus_americanus
ENSHBUG00000005216	tdrd1	87	34.651	ENSUMAG00000000705	TDRD1	85	33.619	Ursus_maritimus
ENSHBUG00000005216	tdrd1	84	33.202	ENSVPAG00000004000	TDRD1	82	33.695	Vicugna_pacos
ENSHBUG00000005216	tdrd1	90	32.180	ENSVVUG00000009750	TDRD1	88	33.204	Vulpes_vulpes
ENSHBUG00000005216	tdrd1	93	57.629	ENSXCOG00000006412	tdrd1	100	57.629	Xiphophorus_couchianus
ENSHBUG00000005216	tdrd1	98	55.729	ENSXMAG00000008104	tdrd1	100	56.759	Xiphophorus_maculatus