EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005246 (Gene tree)
Gene ID: 102294468
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 10587 bases
Position: chrJH425433.1:181958-192544
Accession: 102294468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000003973	HAT	PF02184.16	5.2e-37	1	2
ENSHBUP00000003973	HAT	PF02184.16	5.2e-37	2	2
ENSHBUP00000024065	HAT	PF02184.16	6.6e-37	1	2
ENSHBUP00000024065	HAT	PF02184.16	6.6e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009483	-	5711	XM_005929863	ENSHBUP00000003973	756 (aa)	XP_005929925	UPI0003BD73E2
ENSHBUT00000009501	-	6169	XM_005929862	ENSHBUP00000024065	765 (aa)	XP_005929924	UPI0003BDA372

Gene Model

Click here to download ENSHBUG00000005246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005246	crnkl1	90	86.706	ENSG00000101343	CRNKL1	99	86.706	Homo_sapiens
ENSHBUG00000005246	crnkl1	100	89.633	ENSAPOG00000009705	crnkl1	99	93.149	Acanthochromis_polyacanthus
ENSHBUG00000005246	crnkl1	89	87.500	ENSAMEG00000000270	CRNKL1	82	87.592	Ailuropoda_melanoleuca
ENSHBUG00000005246	crnkl1	95	91.911	ENSACIG00000015267	crnkl1	100	90.873	Amphilophus_citrinellus
ENSHBUG00000005246	crnkl1	100	90.608	ENSAOCG00000021964	crnkl1	100	90.608	Amphiprion_ocellaris
ENSHBUG00000005246	crnkl1	100	90.079	ENSAPEG00000015041	crnkl1	100	90.608	Amphiprion_percula
ENSHBUG00000005246	crnkl1	100	86.352	ENSATEG00000001068	crnkl1	100	87.712	Anabas_testudineus
ENSHBUG00000005246	crnkl1	90	84.956	ENSAPLG00000013105	CRNKL1	99	84.956	Anas_platyrhynchos
ENSHBUG00000005246	crnkl1	90	87.665	ENSACAG00000005284	CRNKL1	99	87.665	Anolis_carolinensis
ENSHBUG00000005246	crnkl1	83	87.460	ENSANAG00000024889	CRNKL1	99	87.460	Aotus_nancymaae
ENSHBUG00000005246	crnkl1	100	99.206	ENSACLG00000010813	crnkl1	100	99.206	Astatotilapia_calliptera
ENSHBUG00000005246	crnkl1	88	92.932	ENSAMXG00000018334	crnkl1	96	87.586	Astyanax_mexicanus
ENSHBUG00000005246	crnkl1	90	86.377	ENSBTAG00000008472	CRNKL1	99	86.377	Bos_taurus
ENSHBUG00000005246	crnkl1	85	63.919	WBGene00019762	M03F8.3	98	59.508	Caenorhabditis_elegans
ENSHBUG00000005246	crnkl1	90	87.149	ENSCJAG00000005393	CRNKL1	99	87.149	Callithrix_jacchus
ENSHBUG00000005246	crnkl1	89	87.500	ENSCAFG00000005333	CRNKL1	93	87.592	Canis_familiaris
ENSHBUG00000005246	crnkl1	90	87.592	ENSCAFG00020027488	CRNKL1	99	87.592	Canis_lupus_dingo
ENSHBUG00000005246	crnkl1	90	85.217	ENSCHIG00000013171	CRNKL1	99	85.217	Capra_hircus
ENSHBUG00000005246	crnkl1	90	86.257	ENSTSYG00000004197	CRNKL1	99	86.257	Carlito_syrichta
ENSHBUG00000005246	crnkl1	82	84.194	ENSCAPG00000010501	CRNKL1	99	84.194	Cavia_aperea
ENSHBUG00000005246	crnkl1	90	86.411	ENSCPOG00000004418	CRNKL1	99	86.411	Cavia_porcellus
ENSHBUG00000005246	crnkl1	90	87.297	ENSCCAG00000027037	CRNKL1	99	87.297	Cebus_capucinus
ENSHBUG00000005246	crnkl1	90	86.854	ENSCATG00000034247	CRNKL1	99	86.854	Cercocebus_atys
ENSHBUG00000005246	crnkl1	90	87.149	ENSCLAG00000013859	CRNKL1	99	87.149	Chinchilla_lanigera
ENSHBUG00000005246	crnkl1	90	86.854	ENSCSAG00000011434	CRNKL1	99	86.854	Chlorocebus_sabaeus
ENSHBUG00000005246	crnkl1	89	86.756	ENSCHOG00000006371	CRNKL1	83	86.854	Choloepus_hoffmanni
ENSHBUG00000005246	crnkl1	90	88.201	ENSCPBG00000023501	CRNKL1	99	88.201	Chrysemys_picta_bellii
ENSHBUG00000005246	crnkl1	88	68.976	ENSCING00000002709	-	99	66.429	Ciona_intestinalis
ENSHBUG00000005246	crnkl1	90	86.854	ENSCANG00000038789	CRNKL1	99	86.854	Colobus_angolensis_palliatus
ENSHBUG00000005246	crnkl1	91	85.735	ENSCGRG00001001115	-	99	85.735	Cricetulus_griseus_chok1gshd
ENSHBUG00000005246	crnkl1	91	85.735	ENSCGRG00001000687	-	99	85.735	Cricetulus_griseus_chok1gshd
ENSHBUG00000005246	crnkl1	91	85.735	ENSCGRG00000007854	Crnkl1	99	85.735	Cricetulus_griseus_crigri
ENSHBUG00000005246	crnkl1	99	83.143	ENSCSEG00000005594	crnkl1	97	84.615	Cynoglossus_semilaevis
ENSHBUG00000005246	crnkl1	88	95.210	ENSCVAG00000015172	crnkl1	97	90.069	Cyprinodon_variegatus
ENSHBUG00000005246	crnkl1	88	91.101	ENSDARG00000007901	crnkl1	96	86.538	Danio_rerio
ENSHBUG00000005246	crnkl1	90	87.297	ENSDNOG00000016226	CRNKL1	94	87.297	Dasypus_novemcinctus
ENSHBUG00000005246	crnkl1	88	81.504	ENSDORG00000023724	-	98	81.504	Dipodomys_ordii
ENSHBUG00000005246	crnkl1	90	85.505	ENSDORG00000000394	-	99	85.505	Dipodomys_ordii
ENSHBUG00000005246	crnkl1	88	80.660	ENSDORG00000030174	-	99	80.660	Dipodomys_ordii
ENSHBUG00000005246	crnkl1	89	68.521	FBgn0000377	crn	99	67.139	Drosophila_melanogaster
ENSHBUG00000005246	crnkl1	88	77.027	ENSETEG00000003711	CRNKL1	81	77.027	Echinops_telfairi
ENSHBUG00000005246	crnkl1	91	62.130	ENSEBUG00000013461	crnkl1	97	56.812	Eptatretus_burgeri
ENSHBUG00000005246	crnkl1	90	87.592	ENSEASG00005002072	CRNKL1	99	87.592	Equus_asinus_asinus
ENSHBUG00000005246	crnkl1	90	87.592	ENSECAG00000022215	CRNKL1	99	87.592	Equus_caballus
ENSHBUG00000005246	crnkl1	89	84.673	ENSEEUG00000000413	CRNKL1	91	84.786	Erinaceus_europaeus
ENSHBUG00000005246	crnkl1	88	90.705	ENSELUG00000015424	crnkl1	99	87.589	Esox_lucius
ENSHBUG00000005246	crnkl1	90	87.592	ENSFCAG00000000714	CRNKL1	99	87.592	Felis_catus
ENSHBUG00000005246	crnkl1	86	86.983	ENSFALG00000004611	CRNKL1	99	85.843	Ficedula_albicollis
ENSHBUG00000005246	crnkl1	90	87.149	ENSFDAG00000000604	CRNKL1	99	87.149	Fukomys_damarensis
ENSHBUG00000005246	crnkl1	100	88.158	ENSFHEG00000013163	crnkl1	94	90.096	Fundulus_heteroclitus
ENSHBUG00000005246	crnkl1	88	89.701	ENSGMOG00000007609	crnkl1	97	86.525	Gadus_morhua
ENSHBUG00000005246	crnkl1	90	87.611	ENSGALG00000008429	CRNKL1	99	87.611	Gallus_gallus
ENSHBUG00000005246	crnkl1	88	94.461	ENSGAFG00000014249	crnkl1	97	87.186	Gambusia_affinis
ENSHBUG00000005246	crnkl1	100	85.000	ENSGACG00000011852	crnkl1	97	87.295	Gasterosteus_aculeatus
ENSHBUG00000005246	crnkl1	86	86.574	ENSGAGG00000021233	CRNKL1	99	86.574	Gopherus_agassizii
ENSHBUG00000005246	crnkl1	90	86.706	ENSGGOG00000014176	CRNKL1	99	86.706	Gorilla_gorilla
ENSHBUG00000005246	crnkl1	90	87.149	ENSHGLG00000010856	CRNKL1	99	87.149	Heterocephalus_glaber_female
ENSHBUG00000005246	crnkl1	90	87.149	ENSHGLG00100011521	CRNKL1	99	87.149	Heterocephalus_glaber_male
ENSHBUG00000005246	crnkl1	88	90.255	ENSHCOG00000006420	crnkl1	99	88.244	Hippocampus_comes
ENSHBUG00000005246	crnkl1	84	72.913	ENSIPUG00000000315	-	99	72.913	Ictalurus_punctatus
ENSHBUG00000005246	crnkl1	90	87.427	ENSIPUG00000006751	crnkl1	98	85.836	Ictalurus_punctatus
ENSHBUG00000005246	crnkl1	88	77.526	ENSIPUG00000006836	-	97	77.594	Ictalurus_punctatus
ENSHBUG00000005246	crnkl1	90	87.592	ENSSTOG00000014747	CRNKL1	99	87.592	Ictidomys_tridecemlineatus
ENSHBUG00000005246	crnkl1	90	84.993	ENSJJAG00000016926	Crnkl1	99	84.993	Jaculus_jaculus
ENSHBUG00000005246	crnkl1	96	89.655	ENSKMAG00000003620	crnkl1	91	89.409	Kryptolebias_marmoratus
ENSHBUG00000005246	crnkl1	93	72.028	ENSLBEG00000003543	crnkl1	96	72.867	Labrus_bergylta
ENSHBUG00000005246	crnkl1	90	88.348	ENSLACG00000001129	CRNKL1	99	88.348	Latimeria_chalumnae
ENSHBUG00000005246	crnkl1	88	92.030	ENSLOCG00000016889	crnkl1	99	86.088	Lepisosteus_oculatus
ENSHBUG00000005246	crnkl1	90	86.283	ENSLAFG00000004512	CRNKL1	99	87.021	Loxodonta_africana
ENSHBUG00000005246	crnkl1	90	86.854	ENSMFAG00000039893	CRNKL1	99	86.854	Macaca_fascicularis
ENSHBUG00000005246	crnkl1	90	86.854	ENSMMUG00000007709	CRNKL1	99	86.854	Macaca_mulatta
ENSHBUG00000005246	crnkl1	90	86.854	ENSMNEG00000037490	CRNKL1	99	86.854	Macaca_nemestrina
ENSHBUG00000005246	crnkl1	90	86.854	ENSMLEG00000034885	CRNKL1	99	86.854	Mandrillus_leucophaeus
ENSHBUG00000005246	crnkl1	95	91.760	ENSMAMG00000008757	crnkl1	95	91.334	Mastacembelus_armatus
ENSHBUG00000005246	crnkl1	100	98.810	ENSMZEG00005022345	crnkl1	100	98.810	Maylandia_zebra
ENSHBUG00000005246	crnkl1	90	86.892	ENSMGAG00000003452	CRNKL1	93	86.892	Meleagris_gallopavo
ENSHBUG00000005246	crnkl1	91	85.735	ENSMAUG00000020764	Crnkl1	99	85.735	Mesocricetus_auratus
ENSHBUG00000005246	crnkl1	90	87.001	ENSMICG00000006048	CRNKL1	99	87.001	Microcebus_murinus
ENSHBUG00000005246	crnkl1	88	63.554	ENSMOCG00000004179	-	99	62.229	Microtus_ochrogaster
ENSHBUG00000005246	crnkl1	91	77.857	ENSMOCG00000000681	-	98	80.699	Microtus_ochrogaster
ENSHBUG00000005246	crnkl1	83	91.456	ENSMMOG00000017601	crnkl1	97	91.456	Mola_mola
ENSHBUG00000005246	crnkl1	90	80.412	ENSMODG00000010857	-	98	80.412	Monodelphis_domestica
ENSHBUG00000005246	crnkl1	88	85.185	ENSMODG00000005961	-	96	85.185	Monodelphis_domestica
ENSHBUG00000005246	crnkl1	94	67.958	ENSMALG00000011211	crnkl1	99	71.278	Monopterus_albus
ENSHBUG00000005246	crnkl1	91	86.026	MGP_CAROLIEiJ_G0024394	Crnkl1	99	86.026	Mus_caroli
ENSHBUG00000005246	crnkl1	91	86.026	ENSMUSG00000001767	Crnkl1	99	86.026	Mus_musculus
ENSHBUG00000005246	crnkl1	91	85.298	MGP_PahariEiJ_G0025838	Crnkl1	99	85.298	Mus_pahari
ENSHBUG00000005246	crnkl1	91	86.026	MGP_SPRETEiJ_G0025312	Crnkl1	99	86.026	Mus_spretus
ENSHBUG00000005246	crnkl1	90	87.592	ENSMPUG00000001226	CRNKL1	99	87.592	Mustela_putorius_furo
ENSHBUG00000005246	crnkl1	89	86.776	ENSMLUG00000016513	CRNKL1	88	86.873	Myotis_lucifugus
ENSHBUG00000005246	crnkl1	90	85.217	ENSNGAG00000023097	Crnkl1	99	85.217	Nannospalax_galili
ENSHBUG00000005246	crnkl1	100	98.419	ENSNBRG00000007867	crnkl1	100	98.419	Neolamprologus_brichardi
ENSHBUG00000005246	crnkl1	90	83.900	ENSNLEG00000009862	CRNKL1	99	83.900	Nomascus_leucogenys
ENSHBUG00000005246	crnkl1	86	88.018	ENSMEUG00000012167	-	97	88.018	Notamacropus_eugenii
ENSHBUG00000005246	crnkl1	90	81.416	ENSMEUG00000002361	-	98	81.416	Notamacropus_eugenii
ENSHBUG00000005246	crnkl1	78	60.271	ENSOPRG00000009242	-	62	59.770	Ochotona_princeps
ENSHBUG00000005246	crnkl1	90	86.706	ENSODEG00000012175	CRNKL1	99	86.706	Octodon_degus
ENSHBUG00000005246	crnkl1	100	97.889	ENSONIG00000018728	crnkl1	100	97.889	Oreochromis_niloticus
ENSHBUG00000005246	crnkl1	89	86.499	ENSOCUG00000015484	CRNKL1	82	87.187	Oryctolagus_cuniculus
ENSHBUG00000005246	crnkl1	100	86.905	ENSORLG00000017240	crnkl1	97	88.583	Oryzias_latipes
ENSHBUG00000005246	crnkl1	100	86.939	ENSORLG00020001742	crnkl1	96	88.858	Oryzias_latipes_hni
ENSHBUG00000005246	crnkl1	100	85.847	ENSORLG00015019564	crnkl1	97	88.721	Oryzias_latipes_hsok
ENSHBUG00000005246	crnkl1	100	88.228	ENSOMEG00000019895	crnkl1	100	87.566	Oryzias_melastigma
ENSHBUG00000005246	crnkl1	90	86.854	ENSOGAG00000011544	CRNKL1	99	86.854	Otolemur_garnettii
ENSHBUG00000005246	crnkl1	89	87.221	ENSOARG00000002150	CRNKL1	88	87.316	Ovis_aries
ENSHBUG00000005246	crnkl1	89	85.565	ENSPPAG00000027847	CRNKL1	82	85.672	Pan_paniscus
ENSHBUG00000005246	crnkl1	90	87.592	ENSPPRG00000001955	CRNKL1	99	87.592	Panthera_pardus
ENSHBUG00000005246	crnkl1	90	87.592	ENSPTIG00000007393	CRNKL1	99	87.592	Panthera_tigris_altaica
ENSHBUG00000005246	crnkl1	90	86.706	ENSPTRG00000030609	CRNKL1	99	86.706	Pan_troglodytes
ENSHBUG00000005246	crnkl1	90	86.854	ENSPANG00000017420	CRNKL1	99	86.854	Papio_anubis
ENSHBUG00000005246	crnkl1	88	85.886	ENSPKIG00000017093	crnkl1	95	80.628	Paramormyrops_kingsleyae
ENSHBUG00000005246	crnkl1	89	86.815	ENSPSIG00000012705	CRNKL1	98	86.815	Pelodiscus_sinensis
ENSHBUG00000005246	crnkl1	91	84.402	ENSPMGG00000006263	crnkl1	95	84.889	Periophthalmus_magnuspinnatus
ENSHBUG00000005246	crnkl1	91	86.026	ENSPEMG00000000073	-	99	86.026	Peromyscus_maniculatus_bairdii
ENSHBUG00000005246	crnkl1	89	83.284	ENSPMAG00000002250	crnkl1	98	83.284	Petromyzon_marinus
ENSHBUG00000005246	crnkl1	88	87.538	ENSPCIG00000025825	CRNKL1	93	87.538	Phascolarctos_cinereus
ENSHBUG00000005246	crnkl1	100	86.905	ENSPFOG00000005102	crnkl1	100	86.905	Poecilia_formosa
ENSHBUG00000005246	crnkl1	88	94.311	ENSPLAG00000007288	crnkl1	94	89.286	Poecilia_latipinna
ENSHBUG00000005246	crnkl1	88	94.461	ENSPMEG00000008865	crnkl1	98	89.409	Poecilia_mexicana
ENSHBUG00000005246	crnkl1	94	94.681	ENSPREG00000012615	crnkl1	100	86.013	Poecilia_reticulata
ENSHBUG00000005246	crnkl1	89	86.756	ENSPPYG00000010747	CRNKL1	80	86.854	Pongo_abelii
ENSHBUG00000005246	crnkl1	87	82.905	ENSPCAG00000003296	CRNKL1	83	83.033	Procavia_capensis
ENSHBUG00000005246	crnkl1	89	85.714	ENSPCOG00000017608	CRNKL1	82	85.820	Propithecus_coquereli
ENSHBUG00000005246	crnkl1	89	87.351	ENSPVAG00000006207	CRNKL1	82	87.445	Pteropus_vampyrus
ENSHBUG00000005246	crnkl1	100	99.074	ENSPNYG00000001977	crnkl1	100	99.074	Pundamilia_nyererei
ENSHBUG00000005246	crnkl1	88	93.253	ENSPNAG00000001507	crnkl1	99	86.801	Pygocentrus_nattereri
ENSHBUG00000005246	crnkl1	91	86.026	ENSRNOG00000010587	Crnkl1	99	86.026	Rattus_norvegicus
ENSHBUG00000005246	crnkl1	91	85.881	ENSRNOG00000040045	Crnkl1	99	85.881	Rattus_norvegicus
ENSHBUG00000005246	crnkl1	90	86.854	ENSRBIG00000031770	CRNKL1	99	86.854	Rhinopithecus_bieti
ENSHBUG00000005246	crnkl1	90	86.706	ENSRROG00000040450	CRNKL1	99	86.706	Rhinopithecus_roxellana
ENSHBUG00000005246	crnkl1	86	36.614	YLR117C	CLF1	99	36.705	Saccharomyces_cerevisiae
ENSHBUG00000005246	crnkl1	90	87.149	ENSSBOG00000029672	CRNKL1	99	87.149	Saimiri_boliviensis_boliviensis
ENSHBUG00000005246	crnkl1	87	70.320	ENSSHAG00000011199	CRNKL1	99	70.320	Sarcophilus_harrisii
ENSHBUG00000005246	crnkl1	88	91.403	ENSSFOG00015000946	crnkl1	94	85.989	Scleropages_formosus
ENSHBUG00000005246	crnkl1	95	87.891	ENSSMAG00000007933	crnkl1	100	85.770	Scophthalmus_maximus
ENSHBUG00000005246	crnkl1	93	84.965	ENSSDUG00000012625	crnkl1	97	81.950	Seriola_dumerili
ENSHBUG00000005246	crnkl1	96	91.632	ENSSLDG00000021413	crnkl1	94	91.632	Seriola_lalandi_dorsalis
ENSHBUG00000005246	crnkl1	90	86.558	ENSSARG00000006443	CRNKL1	81	86.558	Sorex_araneus
ENSHBUG00000005246	crnkl1	90	87.318	ENSSPUG00000005254	CRNKL1	100	87.318	Sphenodon_punctatus
ENSHBUG00000005246	crnkl1	95	91.806	ENSSPAG00000016150	crnkl1	97	89.390	Stegastes_partitus
ENSHBUG00000005246	crnkl1	90	86.377	ENSSSCG00000038587	CRNKL1	99	86.377	Sus_scrofa
ENSHBUG00000005246	crnkl1	88	87.425	ENSTGUG00000007645	CRNKL1	97	86.303	Taeniopygia_guttata
ENSHBUG00000005246	crnkl1	99	80.212	ENSTRUG00000015417	crnkl1	95	82.531	Takifugu_rubripes
ENSHBUG00000005246	crnkl1	88	91.194	ENSTNIG00000010710	crnkl1	99	89.451	Tetraodon_nigroviridis
ENSHBUG00000005246	crnkl1	83	85.920	ENSTBEG00000001304	CRNKL1	82	86.032	Tupaia_belangeri
ENSHBUG00000005246	crnkl1	83	83.520	ENSTTRG00000000484	CRNKL1	81	83.651	Tursiops_truncatus
ENSHBUG00000005246	crnkl1	90	87.592	ENSUAMG00000018586	CRNKL1	99	87.592	Ursus_americanus
ENSHBUG00000005246	crnkl1	90	87.592	ENSUMAG00000024957	CRNKL1	99	87.592	Ursus_maritimus
ENSHBUG00000005246	crnkl1	89	87.500	ENSVVUG00000012559	CRNKL1	81	87.592	Vulpes_vulpes
ENSHBUG00000005246	crnkl1	88	88.174	ENSXETG00000009698	crnkl1	97	88.174	Xenopus_tropicalis
ENSHBUG00000005246	crnkl1	100	85.337	ENSXCOG00000000824	crnkl1	100	85.359	Xiphophorus_couchianus
ENSHBUG00000005246	crnkl1	88	94.311	ENSXMAG00000006896	crnkl1	100	86.126	Xiphophorus_maculatus