EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005269 (Gene tree)
Gene ID: 102308521
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 35986 bases
Position: chrJH425503.1:817302-853287
Accession: 102308521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024030	RRM_1	PF00076.22	3e-07	1	1
ENSHBUP00000024042	RRM_1	PF00076.22	3.8e-07	1	1
ENSHBUP00000003940	RRM_1	PF00076.22	6e-07	1	1
ENSHBUP00000003949	RRM_1	PF00076.22	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009583	-	2301	-	ENSHBUP00000024030	766 (aa)	-	-
ENSHBUT00000009523	-	5073	XM_005935236	ENSHBUP00000003949	1283 (aa)	XP_005935298	-
ENSHBUT00000009557	-	4342	XM_014337789	ENSHBUP00000024042	873 (aa)	XP_014193275	-
ENSHBUT00000009540	-	4977	-	ENSHBUP00000003940	1251 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005269	ppargc1a	99	84.375	ENSG00000109819	PPARGC1A	96	69.024	Homo_sapiens
ENSHBUG00000005269	ppargc1a	100	98.381	ENSAPOG00000018632	ppargc1a	99	97.959	Acanthochromis_polyacanthus
ENSHBUG00000005269	ppargc1a	52	71.369	ENSAMEG00000010421	PPARGC1A	66	71.784	Ailuropoda_melanoleuca
ENSHBUG00000005269	ppargc1a	90	98.758	ENSACIG00000009732	ppargc1a	99	97.571	Amphilophus_citrinellus
ENSHBUG00000005269	ppargc1a	100	98.381	ENSAOCG00000006754	ppargc1a	100	97.959	Amphiprion_ocellaris
ENSHBUG00000005269	ppargc1a	99	96.721	ENSAPEG00000022574	ppargc1a	100	97.959	Amphiprion_percula
ENSHBUG00000005269	ppargc1a	99	96.721	ENSATEG00000016702	ppargc1a	100	95.951	Anabas_testudineus
ENSHBUG00000005269	ppargc1a	74	52.333	ENSAPLG00000005303	PPARGC1A	64	74.886	Anas_platyrhynchos
ENSHBUG00000005269	ppargc1a	99	43.710	ENSACAG00000000741	PPARGC1A	70	81.034	Anolis_carolinensis
ENSHBUG00000005269	ppargc1a	99	88.525	ENSANAG00000035930	PPARGC1A	69	83.030	Aotus_nancymaae
ENSHBUG00000005269	ppargc1a	99	99.448	ENSACLG00000001002	ppargc1a	100	99.190	Astatotilapia_calliptera
ENSHBUG00000005269	ppargc1a	99	95.082	ENSAMXG00000002461	ppargc1a	89	89.349	Astyanax_mexicanus
ENSHBUG00000005269	ppargc1a	91	81.818	ENSBTAG00000017024	PPARGC1A	88	82.184	Bos_taurus
ENSHBUG00000005269	ppargc1a	99	86.885	ENSCJAG00000013024	PPARGC1A	87	83.030	Callithrix_jacchus
ENSHBUG00000005269	ppargc1a	90	82.927	ENSCAFG00000016519	PPARGC1A	88	83.333	Canis_familiaris
ENSHBUG00000005269	ppargc1a	89	82.927	ENSCAFG00020027242	PPARGC1A	89	83.333	Canis_lupus_dingo
ENSHBUG00000005269	ppargc1a	99	46.420	ENSCHIG00000015991	PPARGC1A	88	82.184	Capra_hircus
ENSHBUG00000005269	ppargc1a	98	88.333	ENSTSYG00000010439	PPARGC1A	87	82.424	Carlito_syrichta
ENSHBUG00000005269	ppargc1a	86	85.714	ENSCAPG00000005150	PPARGC1A	79	81.818	Cavia_aperea
ENSHBUG00000005269	ppargc1a	88	84.375	ENSCPOG00000001518	PPARGC1A	87	81.818	Cavia_porcellus
ENSHBUG00000005269	ppargc1a	98	76.562	ENSCCAG00000024681	PPARGC1A	87	83.133	Cebus_capucinus
ENSHBUG00000005269	ppargc1a	99	86.885	ENSCATG00000032575	PPARGC1A	87	83.030	Cercocebus_atys
ENSHBUG00000005269	ppargc1a	99	88.525	ENSCLAG00000002058	PPARGC1A	87	81.212	Chinchilla_lanigera
ENSHBUG00000005269	ppargc1a	99	84.375	ENSCSAG00000016575	PPARGC1A	87	83.030	Chlorocebus_sabaeus
ENSHBUG00000005269	ppargc1a	74	52.985	ENSCPBG00000007891	PPARGC1B	53	52.985	Chrysemys_picta_bellii
ENSHBUG00000005269	ppargc1a	99	84.375	ENSCANG00000033426	PPARGC1A	69	83.030	Colobus_angolensis_palliatus
ENSHBUG00000005269	ppargc1a	99	44.018	ENSCGRG00001015534	Ppargc1a	82	82.812	Cricetulus_griseus_chok1gshd
ENSHBUG00000005269	ppargc1a	99	44.018	ENSCGRG00000000200	Ppargc1a	82	82.812	Cricetulus_griseus_crigri
ENSHBUG00000005269	ppargc1a	100	95.951	ENSCSEG00000006884	ppargc1a	100	89.655	Cynoglossus_semilaevis
ENSHBUG00000005269	ppargc1a	99	68.894	ENSCVAG00000016547	ppargc1a	97	78.472	Cyprinodon_variegatus
ENSHBUG00000005269	ppargc1a	93	86.667	ENSDARG00000067829	ppargc1a	88	89.941	Danio_rerio
ENSHBUG00000005269	ppargc1a	99	86.885	ENSDNOG00000041106	PPARGC1A	88	82.759	Dasypus_novemcinctus
ENSHBUG00000005269	ppargc1a	89	88.525	ENSDORG00000016276	Ppargc1a	79	88.525	Dipodomys_ordii
ENSHBUG00000005269	ppargc1a	90	82.317	ENSEASG00005007984	PPARGC1A	88	82.759	Equus_asinus_asinus
ENSHBUG00000005269	ppargc1a	90	82.317	ENSECAG00000009164	PPARGC1A	86	82.759	Equus_caballus
ENSHBUG00000005269	ppargc1a	98	53.589	ENSEEUG00000009219	PPARGC1A	91	74.872	Erinaceus_europaeus
ENSHBUG00000005269	ppargc1a	99	96.721	ENSELUG00000017027	ppargc1a	100	60.654	Esox_lucius
ENSHBUG00000005269	ppargc1a	100	54.481	ENSFCAG00000000043	PPARGC1A	69	82.659	Felis_catus
ENSHBUG00000005269	ppargc1a	99	45.243	ENSFALG00000009211	PPARGC1A	66	51.056	Ficedula_albicollis
ENSHBUG00000005269	ppargc1a	90	84.375	ENSFDAG00000005659	PPARGC1A	70	80.460	Fukomys_damarensis
ENSHBUG00000005269	ppargc1a	100	95.851	ENSFHEG00000021990	ppargc1a	100	80.503	Fundulus_heteroclitus
ENSHBUG00000005269	ppargc1a	74	52.492	ENSGALG00000042851	PPARGC1A	64	75.342	Gallus_gallus
ENSHBUG00000005269	ppargc1a	100	95.021	ENSGAFG00000015514	ppargc1a	100	93.878	Gambusia_affinis
ENSHBUG00000005269	ppargc1a	73	52.555	ENSGAGG00000012870	PPARGC1B	51	52.555	Gopherus_agassizii
ENSHBUG00000005269	ppargc1a	99	53.103	ENSGAGG00000007043	PPARGC1A	87	82.184	Gopherus_agassizii
ENSHBUG00000005269	ppargc1a	99	84.375	ENSGGOG00000009810	PPARGC1A	69	83.030	Gorilla_gorilla
ENSHBUG00000005269	ppargc1a	98	88.333	ENSHGLG00000007022	PPARGC1A	81	88.333	Heterocephalus_glaber_female
ENSHBUG00000005269	ppargc1a	57	50.360	ENSHGLG00000005967	PPARGC1B	51	50.360	Heterocephalus_glaber_female
ENSHBUG00000005269	ppargc1a	99	84.375	ENSHGLG00100000133	PPARGC1A	88	80.460	Heterocephalus_glaber_male
ENSHBUG00000005269	ppargc1a	99	96.721	ENSHCOG00000014886	ppargc1a	99	88.772	Hippocampus_comes
ENSHBUG00000005269	ppargc1a	95	94.737	ENSIPUG00000020313	ppargc1a	60	94.737	Ictalurus_punctatus
ENSHBUG00000005269	ppargc1a	99	86.885	ENSSTOG00000012522	PPARGC1A	87	81.212	Ictidomys_tridecemlineatus
ENSHBUG00000005269	ppargc1a	55	51.064	ENSJJAG00000018633	Ppargc1b	52	48.148	Jaculus_jaculus
ENSHBUG00000005269	ppargc1a	99	95.082	ENSKMAG00000005390	ppargc1a	95	93.277	Kryptolebias_marmoratus
ENSHBUG00000005269	ppargc1a	98	96.721	ENSLBEG00000019562	ppargc1a	100	94.694	Labrus_bergylta
ENSHBUG00000005269	ppargc1a	88	87.791	ENSLACG00000014054	PPARGC1A	65	88.710	Latimeria_chalumnae
ENSHBUG00000005269	ppargc1a	64	45.113	ENSLOCG00000012195	ppargc1b	55	45.113	Lepisosteus_oculatus
ENSHBUG00000005269	ppargc1a	99	84.375	ENSLAFG00000012981	PPARGC1A	87	81.818	Loxodonta_africana
ENSHBUG00000005269	ppargc1a	99	84.375	ENSMFAG00000000534	PPARGC1A	87	83.030	Macaca_fascicularis
ENSHBUG00000005269	ppargc1a	99	84.375	ENSMMUG00000001844	PPARGC1A	89	82.500	Macaca_mulatta
ENSHBUG00000005269	ppargc1a	99	86.885	ENSMNEG00000028682	PPARGC1A	87	83.030	Macaca_nemestrina
ENSHBUG00000005269	ppargc1a	99	84.375	ENSMLEG00000034233	PPARGC1A	87	83.030	Mandrillus_leucophaeus
ENSHBUG00000005269	ppargc1a	99	98.361	ENSMAMG00000005531	ppargc1a	99	96.503	Mastacembelus_armatus
ENSHBUG00000005269	ppargc1a	100	99.454	ENSMZEG00005001739	ppargc1a	100	99.454	Maylandia_zebra
ENSHBUG00000005269	ppargc1a	74	52.326	ENSMGAG00000012485	PPARGC1A	66	75.234	Meleagris_gallopavo
ENSHBUG00000005269	ppargc1a	70	70.954	ENSMAUG00000011811	Ppargc1a	84	81.212	Mesocricetus_auratus
ENSHBUG00000005269	ppargc1a	65	82.317	ENSMICG00000015390	PPARGC1A	87	82.424	Microcebus_murinus
ENSHBUG00000005269	ppargc1a	70	69.959	ENSMOCG00000008765	Ppargc1a	84	81.212	Microtus_ochrogaster
ENSHBUG00000005269	ppargc1a	99	98.361	ENSMMOG00000011847	ppargc1a	99	95.105	Mola_mola
ENSHBUG00000005269	ppargc1a	99	95.142	ENSMALG00000004625	ppargc1a	93	95.455	Monopterus_albus
ENSHBUG00000005269	ppargc1a	70	68.724	MGP_CAROLIEiJ_G0027213	Ppargc1a	82	82.812	Mus_caroli
ENSHBUG00000005269	ppargc1a	99	82.812	ENSMUSG00000029167	Ppargc1a	82	82.812	Mus_musculus
ENSHBUG00000005269	ppargc1a	99	82.812	MGP_PahariEiJ_G0016995	Ppargc1a	82	82.812	Mus_pahari
ENSHBUG00000005269	ppargc1a	99	82.812	MGP_SPRETEiJ_G0028208	Ppargc1a	82	82.812	Mus_spretus
ENSHBUG00000005269	ppargc1a	52	71.369	ENSMPUG00000016736	PPARGC1A	58	84.375	Mustela_putorius_furo
ENSHBUG00000005269	ppargc1a	99	84.375	ENSMLUG00000016307	PPARGC1A	88	82.759	Myotis_lucifugus
ENSHBUG00000005269	ppargc1a	99	81.250	ENSNGAG00000015090	Ppargc1a	88	81.034	Nannospalax_galili
ENSHBUG00000005269	ppargc1a	100	97.911	ENSNBRG00000023403	ppargc1a	100	99.595	Neolamprologus_brichardi
ENSHBUG00000005269	ppargc1a	71	50.676	ENSNLEG00000010193	PPARGC1B	53	50.676	Nomascus_leucogenys
ENSHBUG00000005269	ppargc1a	99	84.375	ENSNLEG00000016760	PPARGC1A	68	82.500	Nomascus_leucogenys
ENSHBUG00000005269	ppargc1a	69	69.710	ENSOPRG00000012899	PPARGC1A	87	81.212	Ochotona_princeps
ENSHBUG00000005269	ppargc1a	100	79.234	ENSONIG00000007635	ppargc1a	99	88.797	Oreochromis_niloticus
ENSHBUG00000005269	ppargc1a	100	55.516	ENSOANG00000006680	PPARGC1A	89	83.908	Ornithorhynchus_anatinus
ENSHBUG00000005269	ppargc1a	99	84.375	ENSOCUG00000014668	PPARGC1A	87	81.818	Oryctolagus_cuniculus
ENSHBUG00000005269	ppargc1a	100	95.951	ENSORLG00000004788	ppargc1a	99	95.918	Oryzias_latipes
ENSHBUG00000005269	ppargc1a	100	95.951	ENSORLG00020014690	ppargc1a	97	96.371	Oryzias_latipes_hni
ENSHBUG00000005269	ppargc1a	100	95.547	ENSORLG00015012206	ppargc1a	97	96.053	Oryzias_latipes_hsok
ENSHBUG00000005269	ppargc1a	99	96.923	ENSOMEG00000000670	ppargc1a	100	95.142	Oryzias_melastigma
ENSHBUG00000005269	ppargc1a	100	54.299	ENSOGAG00000014559	PPARGC1A	87	81.818	Otolemur_garnettii
ENSHBUG00000005269	ppargc1a	91	81.818	ENSOARG00000005581	PPARGC1A	85	82.184	Ovis_aries
ENSHBUG00000005269	ppargc1a	99	84.375	ENSPPAG00000034694	PPARGC1A	69	83.030	Pan_paniscus
ENSHBUG00000005269	ppargc1a	100	54.535	ENSPPRG00000001711	PPARGC1A	88	82.659	Panthera_pardus
ENSHBUG00000005269	ppargc1a	100	54.535	ENSPTIG00000007378	PPARGC1A	88	82.659	Panthera_tigris_altaica
ENSHBUG00000005269	ppargc1a	99	84.375	ENSPTRG00000015954	PPARGC1A	69	83.030	Pan_troglodytes
ENSHBUG00000005269	ppargc1a	99	84.375	ENSPANG00000005420	PPARGC1A	87	83.030	Papio_anubis
ENSHBUG00000005269	ppargc1a	89	90.164	ENSPKIG00000002531	ppargc1a	79	80.000	Paramormyrops_kingsleyae
ENSHBUG00000005269	ppargc1a	100	53.207	ENSPSIG00000011790	PPARGC1A	69	82.759	Pelodiscus_sinensis
ENSHBUG00000005269	ppargc1a	75	48.101	ENSPSIG00000008358	PPARGC1B	54	48.101	Pelodiscus_sinensis
ENSHBUG00000005269	ppargc1a	99	96.721	ENSPMGG00000019204	ppargc1a	93	86.957	Periophthalmus_magnuspinnatus
ENSHBUG00000005269	ppargc1a	99	44.420	ENSPEMG00000010892	Ppargc1a	82	82.812	Peromyscus_maniculatus_bairdii
ENSHBUG00000005269	ppargc1a	100	54.340	ENSPCIG00000015835	PPARGC1A	57	84.375	Phascolarctos_cinereus
ENSHBUG00000005269	ppargc1a	97	96.250	ENSPFOG00000001263	ppargc1a	97	95.439	Poecilia_formosa
ENSHBUG00000005269	ppargc1a	100	78.868	ENSPLAG00000002827	ppargc1a	100	79.172	Poecilia_latipinna
ENSHBUG00000005269	ppargc1a	100	95.833	ENSPMEG00000000720	ppargc1a	97	95.105	Poecilia_mexicana
ENSHBUG00000005269	ppargc1a	100	96.266	ENSPREG00000019171	ppargc1a	100	95.102	Poecilia_reticulata
ENSHBUG00000005269	ppargc1a	99	84.375	ENSPPYG00000014640	PPARGC1A	69	83.030	Pongo_abelii
ENSHBUG00000005269	ppargc1a	99	84.375	ENSPCAG00000016308	PPARGC1A	87	80.606	Procavia_capensis
ENSHBUG00000005269	ppargc1a	99	43.856	ENSPCOG00000022858	PPARGC1A	87	82.424	Propithecus_coquereli
ENSHBUG00000005269	ppargc1a	90	81.707	ENSPVAG00000004965	PPARGC1A	88	82.184	Pteropus_vampyrus
ENSHBUG00000005269	ppargc1a	100	99.532	ENSPNYG00000006846	ppargc1a	100	99.595	Pundamilia_nyererei
ENSHBUG00000005269	ppargc1a	99	95.082	ENSPNAG00000010393	ppargc1a	88	90.964	Pygocentrus_nattereri
ENSHBUG00000005269	ppargc1a	70	69.547	ENSRNOG00000004473	Ppargc1a	58	82.812	Rattus_norvegicus
ENSHBUG00000005269	ppargc1a	99	84.375	ENSRBIG00000032333	PPARGC1A	69	83.030	Rhinopithecus_bieti
ENSHBUG00000005269	ppargc1a	99	86.885	ENSRROG00000010419	PPARGC1A	69	83.030	Rhinopithecus_roxellana
ENSHBUG00000005269	ppargc1a	99	85.484	ENSSBOG00000006423	PPARGC1A	69	83.030	Saimiri_boliviensis_boliviensis
ENSHBUG00000005269	ppargc1a	100	54.448	ENSSHAG00000010033	PPARGC1A	76	84.375	Sarcophilus_harrisii
ENSHBUG00000005269	ppargc1a	100	51.462	ENSSFOG00015018522	ppargc1a	90	74.534	Scleropages_formosus
ENSHBUG00000005269	ppargc1a	89	90.164	ENSSFOG00015001633	ppargc1a	73	81.065	Scleropages_formosus
ENSHBUG00000005269	ppargc1a	99	96.721	ENSSMAG00000011571	ppargc1a	96	97.368	Scophthalmus_maximus
ENSHBUG00000005269	ppargc1a	100	81.841	ENSSDUG00000007408	ppargc1a	100	81.911	Seriola_dumerili
ENSHBUG00000005269	ppargc1a	99	96.721	ENSSLDG00000006987	ppargc1a	71	96.450	Seriola_lalandi_dorsalis
ENSHBUG00000005269	ppargc1a	91	80.000	ENSSARG00000000575	PPARGC1A	83	80.000	Sorex_araneus
ENSHBUG00000005269	ppargc1a	90	83.537	ENSSPUG00000013556	PPARGC1A	86	83.908	Sphenodon_punctatus
ENSHBUG00000005269	ppargc1a	98	97.845	ENSSPAG00000023514	ppargc1a	99	97.959	Stegastes_partitus
ENSHBUG00000005269	ppargc1a	90	82.927	ENSSSCG00000029275	PPARGC1A	70	83.333	Sus_scrofa
ENSHBUG00000005269	ppargc1a	69	75.342	ENSTGUG00000009487	PPARGC1A	64	75.342	Taeniopygia_guttata
ENSHBUG00000005269	ppargc1a	87	91.329	ENSTRUG00000007210	ppargc1a	85	91.860	Takifugu_rubripes
ENSHBUG00000005269	ppargc1a	100	53.937	ENSTTRG00000005327	PPARGC1A	87	83.030	Tursiops_truncatus
ENSHBUG00000005269	ppargc1a	82	82.317	ENSUAMG00000020843	PPARGC1A	65	82.081	Ursus_americanus
ENSHBUG00000005269	ppargc1a	90	82.317	ENSUMAG00000003557	PPARGC1A	69	82.759	Ursus_maritimus
ENSHBUG00000005269	ppargc1a	83	81.818	ENSVPAG00000003478	PPARGC1A	51	82.184	Vicugna_pacos
ENSHBUG00000005269	ppargc1a	91	82.927	ENSVVUG00000013365	PPARGC1A	88	83.333	Vulpes_vulpes
ENSHBUG00000005269	ppargc1a	90	40.206	ENSXETG00000012711	ppargc1b	57	45.283	Xenopus_tropicalis
ENSHBUG00000005269	ppargc1a	99	42.644	ENSXETG00000020468	ppargc1a	88	79.310	Xenopus_tropicalis
ENSHBUG00000005269	ppargc1a	98	95.833	ENSXCOG00000004835	ppargc1a	97	94.406	Xiphophorus_couchianus
ENSHBUG00000005269	ppargc1a	100	95.417	ENSXMAG00000007748	ppargc1a	100	79.254	Xiphophorus_maculatus