EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000005327 (Gene tree)
Gene ID: 102306774
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3376 bases
Position: chrJH425347.1:3183038-3186413
Accession: 102306774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000004039	zf-U11-48K	PF05253.12	1.7e-19	1	2
ENSHBUP00000004039	zf-U11-48K	PF05253.12	1.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009366	-	1629	XM_005918932	ENSHBUP00000004039	180 (aa)	XP_005918994	UPI0003BDB6CD

Gene Model

Click here to download ENSHBUG00000005327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005327	zgc:56699	97	60.571	ENSAPOG00000021951	-	97	60.571	Acanthochromis_polyacanthus
ENSHBUG00000005327	zgc:56699	81	62.069	ENSAPOG00000000311	-	80	62.069	Acanthochromis_polyacanthus
ENSHBUG00000005327	zgc:56699	100	72.222	ENSACIG00000013400	zgc:56699	99	72.222	Amphilophus_citrinellus
ENSHBUG00000005327	zgc:56699	97	61.714	ENSAOCG00000013650	-	97	61.714	Amphiprion_ocellaris
ENSHBUG00000005327	zgc:56699	97	48.000	ENSAPEG00000006689	zgc:56699	96	48.000	Amphiprion_percula
ENSHBUG00000005327	zgc:56699	100	68.333	ENSATEG00000024058	zgc:56699	99	68.333	Anabas_testudineus
ENSHBUG00000005327	zgc:56699	100	98.889	ENSACLG00000023562	zgc:56699	92	98.889	Astatotilapia_calliptera
ENSHBUG00000005327	zgc:56699	98	52.198	ENSAMXG00000038346	zgc:56699	99	52.198	Astyanax_mexicanus
ENSHBUG00000005327	zgc:56699	87	45.679	ENSAMXG00000036095	-	67	45.679	Astyanax_mexicanus
ENSHBUG00000005327	zgc:56699	98	63.842	ENSCSEG00000021520	zgc:56699	83	63.842	Cynoglossus_semilaevis
ENSHBUG00000005327	zgc:56699	82	56.463	ENSCVAG00000009972	zgc:56699	75	56.463	Cyprinodon_variegatus
ENSHBUG00000005327	zgc:56699	84	46.154	ENSDARG00000099586	CR382383.2	85	46.154	Danio_rerio
ENSHBUG00000005327	zgc:56699	97	45.055	ENSDARG00000000887	zgc:56699	98	45.055	Danio_rerio
ENSHBUG00000005327	zgc:56699	78	40.690	ENSEBUG00000005577	-	75	40.690	Eptatretus_burgeri
ENSHBUG00000005327	zgc:56699	95	50.847	ENSELUG00000003242	gtsf1	96	50.847	Esox_lucius
ENSHBUG00000005327	zgc:56699	99	65.169	ENSFHEG00000006036	zgc:56699	98	53.631	Fundulus_heteroclitus
ENSHBUG00000005327	zgc:56699	83	48.993	ENSGMOG00000007295	zgc:56699	98	48.993	Gadus_morhua
ENSHBUG00000005327	zgc:56699	63	44.444	ENSGALG00000035365	-	66	44.444	Gallus_gallus
ENSHBUG00000005327	zgc:56699	100	65.556	ENSGAFG00000020743	zgc:56699	99	65.556	Gambusia_affinis
ENSHBUG00000005327	zgc:56699	95	47.399	ENSHCOG00000010296	-	97	47.399	Hippocampus_comes
ENSHBUG00000005327	zgc:56699	97	45.556	ENSIPUG00000011498	zgc:56699	95	45.556	Ictalurus_punctatus
ENSHBUG00000005327	zgc:56699	98	67.797	ENSLBEG00000015981	zgc:56699	100	55.367	Labrus_bergylta
ENSHBUG00000005327	zgc:56699	80	43.750	ENSLOCG00000004469	zgc:56699	97	43.750	Lepisosteus_oculatus
ENSHBUG00000005327	zgc:56699	94	65.318	ENSMAMG00000001846	zgc:56699	95	65.318	Mastacembelus_armatus
ENSHBUG00000005327	zgc:56699	100	98.889	ENSMZEG00005026479	zgc:56699	92	98.889	Maylandia_zebra
ENSHBUG00000005327	zgc:56699	100	49.206	ENSMMOG00000017331	zgc:56699	99	49.206	Mola_mola
ENSHBUG00000005327	zgc:56699	100	97.778	ENSNBRG00000006336	zgc:56699	100	97.778	Neolamprologus_brichardi
ENSHBUG00000005327	zgc:56699	100	96.667	ENSONIG00000016720	zgc:56699	92	96.667	Oreochromis_niloticus
ENSHBUG00000005327	zgc:56699	62	40.351	ENSOANG00000030381	-	74	40.351	Ornithorhynchus_anatinus
ENSHBUG00000005327	zgc:56699	100	51.648	ENSORLG00000015258	-	99	51.648	Oryzias_latipes
ENSHBUG00000005327	zgc:56699	78	62.143	ENSORLG00000025877	-	84	62.143	Oryzias_latipes
ENSHBUG00000005327	zgc:56699	100	51.648	ENSORLG00020010990	-	99	51.648	Oryzias_latipes_hni
ENSHBUG00000005327	zgc:56699	78	62.143	ENSORLG00020011013	-	84	62.143	Oryzias_latipes_hni
ENSHBUG00000005327	zgc:56699	100	52.198	ENSORLG00015004961	zgc:56699	99	52.198	Oryzias_latipes_hsok
ENSHBUG00000005327	zgc:56699	100	53.889	ENSOMEG00000021739	-	99	53.889	Oryzias_melastigma
ENSHBUG00000005327	zgc:56699	82	54.730	ENSOMEG00000013200	-	93	54.730	Oryzias_melastigma
ENSHBUG00000005327	zgc:56699	100	57.222	ENSOMEG00000021773	-	99	57.222	Oryzias_melastigma
ENSHBUG00000005327	zgc:56699	97	46.369	ENSPKIG00000017039	zgc:56699	98	46.369	Paramormyrops_kingsleyae
ENSHBUG00000005327	zgc:56699	98	61.017	ENSPMGG00000023241	zgc:56699	96	61.017	Periophthalmus_magnuspinnatus
ENSHBUG00000005327	zgc:56699	63	45.833	ENSPMAG00000009653	-	93	45.833	Petromyzon_marinus
ENSHBUG00000005327	zgc:56699	100	65.556	ENSPFOG00000009204	zgc:56699	99	65.556	Poecilia_formosa
ENSHBUG00000005327	zgc:56699	100	61.667	ENSPLAG00000009088	zgc:56699	98	61.667	Poecilia_latipinna
ENSHBUG00000005327	zgc:56699	100	65.556	ENSPMEG00000001443	zgc:56699	99	65.556	Poecilia_mexicana
ENSHBUG00000005327	zgc:56699	100	66.111	ENSPREG00000000745	zgc:56699	99	66.111	Poecilia_reticulata
ENSHBUG00000005327	zgc:56699	100	98.889	ENSPNYG00000002811	zgc:56699	100	98.889	Pundamilia_nyererei
ENSHBUG00000005327	zgc:56699	97	53.333	ENSPNAG00000005165	zgc:56699	98	53.333	Pygocentrus_nattereri
ENSHBUG00000005327	zgc:56699	93	50.000	ENSSFOG00015021600	zgc:56699	92	50.000	Scleropages_formosus
ENSHBUG00000005327	zgc:56699	100	63.333	ENSSMAG00000020886	zgc:56699	99	63.333	Scophthalmus_maximus
ENSHBUG00000005327	zgc:56699	100	67.778	ENSSDUG00000002033	zgc:56699	99	67.778	Seriola_dumerili
ENSHBUG00000005327	zgc:56699	100	67.778	ENSSLDG00000014113	zgc:56699	99	67.778	Seriola_lalandi_dorsalis
ENSHBUG00000005327	zgc:56699	83	55.921	ENSSPAG00000010005	-	97	55.921	Stegastes_partitus
ENSHBUG00000005327	zgc:56699	95	63.743	ENSSPAG00000019854	-	98	63.429	Stegastes_partitus
ENSHBUG00000005327	zgc:56699	99	54.645	ENSTRUG00000015537	zgc:56699	99	54.645	Takifugu_rubripes
ENSHBUG00000005327	zgc:56699	82	64.189	ENSTNIG00000012515	zgc:56699	97	64.189	Tetraodon_nigroviridis
ENSHBUG00000005327	zgc:56699	97	62.644	ENSXCOG00000014400	zgc:56699	85	62.644	Xiphophorus_couchianus
ENSHBUG00000005327	zgc:56699	97	66.092	ENSXMAG00000011692	zgc:56699	96	66.092	Xiphophorus_maculatus