EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000005329 (Gene tree)
Gene ID: 102305912
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 21903 bases
Position: chrJH425456.1:695738-717640
Accession: 102305912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000024120	KH_1	PF00013.29	4.6e-51	1	3
ENSHBUP00000024120	KH_1	PF00013.29	4.6e-51	2	3
ENSHBUP00000024120	KH_1	PF00013.29	4.6e-51	3	3
ENSHBUP00000024094	KH_1	PF00013.29	2e-39	1	2
ENSHBUP00000024094	KH_1	PF00013.29	2e-39	2	2
ENSHBUP00000024120	KH_2	PF07650.17	5.8e-15	1	1
ENSHBUP00000024094	KH_2	PF07650.17	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000009410	-	3042	XM_005931790	ENSHBUP00000024120	457 (aa)	XP_005931852	UPI0003AFADB6
ENSHBUT00000009431	-	1290	-	ENSHBUP00000024094	429 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000005329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000005329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000005329	-	79	36.111	ENSHBUG00000022849	fubp3	57	36.111
ENSHBUG00000005329	-	51	52.381	ENSHBUG00000006535	hnrpkl	64	52.381
ENSHBUG00000005329	-	71	64.653	ENSHBUG00000010697	pcbp3	93	64.653
ENSHBUG00000005329	-	68	36.486	ENSHBUG00000014760	KHSRP	54	36.486
ENSHBUG00000005329	-	73	61.261	ENSHBUG00000012495	zgc:110045	96	61.261
ENSHBUG00000005329	-	74	61.404	ENSHBUG00000021782	-	97	61.404
ENSHBUG00000005329	-	84	56.380	ENSHBUG00000008769	pcbp2	98	59.475
ENSHBUG00000005329	-	51	48.485	ENSHBUG00000010255	hnrnpk	54	48.485
ENSHBUG00000005329	-	69	32.857	ENSHBUG00000003126	igf2bp2a	68	38.356
ENSHBUG00000005329	-	74	60.237	ENSHBUG00000018512	PCBP2	98	60.237
ENSHBUG00000005329	-	98	73.859	ENSHBUG00000009472	pcbp4	100	72.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000005329	-	96	57.623	ENSG00000090097	PCBP4	97	75.000	Homo_sapiens
ENSHBUG00000005329	-	100	96.718	ENSAPOG00000009897	-	100	96.718	Acanthochromis_polyacanthus
ENSHBUG00000005329	-	54	87.500	ENSAPOG00000018462	-	67	87.500	Acanthochromis_polyacanthus
ENSHBUG00000005329	-	95	58.124	ENSAMEG00000009211	PCBP4	97	58.998	Ailuropoda_melanoleuca
ENSHBUG00000005329	-	94	74.408	ENSACIG00000015264	pcbp4	90	75.708	Amphilophus_citrinellus
ENSHBUG00000005329	-	94	99.031	ENSACIG00000020434	-	100	99.031	Amphilophus_citrinellus
ENSHBUG00000005329	-	94	65.561	ENSAOCG00000006924	-	100	66.071	Amphiprion_ocellaris
ENSHBUG00000005329	-	100	95.804	ENSAOCG00000021366	-	100	95.804	Amphiprion_ocellaris
ENSHBUG00000005329	-	94	76.794	ENSAPEG00000023157	pcbp4	100	77.990	Amphiprion_percula
ENSHBUG00000005329	-	77	94.054	ENSAPEG00000009555	-	88	94.054	Amphiprion_percula
ENSHBUG00000005329	-	94	70.244	ENSATEG00000008529	pcbp4	93	70.976	Anabas_testudineus
ENSHBUG00000005329	-	100	92.009	ENSATEG00000006511	-	100	92.009	Anabas_testudineus
ENSHBUG00000005329	-	95	62.785	ENSACAG00000011701	PCBP4	97	62.557	Anolis_carolinensis
ENSHBUG00000005329	-	96	57.623	ENSANAG00000023072	PCBP4	99	58.482	Aotus_nancymaae
ENSHBUG00000005329	-	98	74.066	ENSACLG00000013348	pcbp4	100	72.817	Astatotilapia_calliptera
ENSHBUG00000005329	-	100	99.781	ENSACLG00000025246	-	100	99.781	Astatotilapia_calliptera
ENSHBUG00000005329	-	100	82.618	ENSAMXG00000033125	pcbp4	100	82.833	Astyanax_mexicanus
ENSHBUG00000005329	-	95	58.124	ENSBTAG00000018622	PCBP4	97	58.998	Bos_taurus
ENSHBUG00000005329	-	96	57.848	ENSCJAG00000005783	PCBP4	99	58.705	Callithrix_jacchus
ENSHBUG00000005329	-	95	58.124	ENSCAFG00000010019	PCBP4	97	58.998	Canis_familiaris
ENSHBUG00000005329	-	95	58.124	ENSCAFG00020022361	PCBP4	97	58.998	Canis_lupus_dingo
ENSHBUG00000005329	-	95	58.352	ENSCHIG00000012918	PCBP4	97	58.998	Capra_hircus
ENSHBUG00000005329	-	95	58.352	ENSTSYG00000008765	PCBP4	97	59.226	Carlito_syrichta
ENSHBUG00000005329	-	95	58.124	ENSCAPG00000005895	PCBP4	97	58.542	Cavia_aperea
ENSHBUG00000005329	-	95	58.124	ENSCPOG00000014617	PCBP4	97	58.998	Cavia_porcellus
ENSHBUG00000005329	-	96	57.848	ENSCCAG00000033268	PCBP4	99	58.705	Cebus_capucinus
ENSHBUG00000005329	-	96	57.848	ENSCATG00000032034	PCBP4	99	58.705	Cercocebus_atys
ENSHBUG00000005329	-	95	58.124	ENSCLAG00000008356	PCBP4	97	58.998	Chinchilla_lanigera
ENSHBUG00000005329	-	96	57.848	ENSCSAG00000013913	PCBP4	99	58.705	Chlorocebus_sabaeus
ENSHBUG00000005329	-	95	62.100	ENSCPBG00000016554	PCBP4	95	62.100	Chrysemys_picta_bellii
ENSHBUG00000005329	-	96	57.848	ENSCANG00000038865	PCBP4	99	58.705	Colobus_angolensis_palliatus
ENSHBUG00000005329	-	95	58.352	ENSCGRG00001014953	Pcbp4	97	59.226	Cricetulus_griseus_chok1gshd
ENSHBUG00000005329	-	95	58.352	ENSCGRG00000008617	Pcbp4	97	59.226	Cricetulus_griseus_crigri
ENSHBUG00000005329	-	98	69.792	ENSCSEG00000014487	pcbp4	95	71.250	Cynoglossus_semilaevis
ENSHBUG00000005329	-	100	85.126	ENSCSEG00000021041	PCBP4	100	85.126	Cynoglossus_semilaevis
ENSHBUG00000005329	-	93	68.916	ENSCVAG00000003674	pcbp4	98	67.126	Cyprinodon_variegatus
ENSHBUG00000005329	-	100	93.654	ENSCVAG00000013090	-	100	93.654	Cyprinodon_variegatus
ENSHBUG00000005329	-	100	81.720	ENSDARG00000024276	pcbp4	100	82.167	Danio_rerio
ENSHBUG00000005329	-	92	79.167	ENSDNOG00000033951	PCBP4	87	72.289	Dasypus_novemcinctus
ENSHBUG00000005329	-	95	57.666	ENSDORG00000000573	Pcbp4	97	58.770	Dipodomys_ordii
ENSHBUG00000005329	-	67	56.270	ENSETEG00000001778	PCBP4	96	56.410	Echinops_telfairi
ENSHBUG00000005329	-	95	57.895	ENSEASG00005012889	PCBP4	97	58.770	Equus_asinus_asinus
ENSHBUG00000005329	-	95	57.895	ENSECAG00000024218	PCBP4	97	58.770	Equus_caballus
ENSHBUG00000005329	-	100	75.158	ENSELUG00000018204	pcbp4	100	75.630	Esox_lucius
ENSHBUG00000005329	-	100	87.257	ENSELUG00000001870	-	100	87.257	Esox_lucius
ENSHBUG00000005329	-	95	58.124	ENSFCAG00000009148	PCBP4	97	58.998	Felis_catus
ENSHBUG00000005329	-	93	58.140	ENSFALG00000008831	PCBP4	95	58.605	Ficedula_albicollis
ENSHBUG00000005329	-	95	57.895	ENSFDAG00000012692	PCBP4	97	58.770	Fukomys_damarensis
ENSHBUG00000005329	-	94	69.479	ENSFHEG00000002769	-	97	69.479	Fundulus_heteroclitus
ENSHBUG00000005329	-	98	87.500	ENSGMOG00000017799	-	100	87.500	Gadus_morhua
ENSHBUG00000005329	-	95	57.763	ENSGALG00000027695	PCBP4	97	58.904	Gallus_gallus
ENSHBUG00000005329	-	83	93.386	ENSGAFG00000021090	-	78	95.640	Gambusia_affinis
ENSHBUG00000005329	-	98	90.848	ENSGACG00000002664	-	100	91.518	Gasterosteus_aculeatus
ENSHBUG00000005329	-	95	62.100	ENSGAGG00000022116	PCBP4	95	62.100	Gopherus_agassizii
ENSHBUG00000005329	-	96	57.623	ENSGGOG00000012474	PCBP4	99	58.482	Gorilla_gorilla
ENSHBUG00000005329	-	95	58.352	ENSHGLG00000012018	PCBP4	97	59.226	Heterocephalus_glaber_female
ENSHBUG00000005329	-	95	56.818	ENSHGLG00100008748	PCBP4	97	57.466	Heterocephalus_glaber_male
ENSHBUG00000005329	-	100	87.991	ENSHCOG00000010838	-	97	98.026	Hippocampus_comes
ENSHBUG00000005329	-	100	83.043	ENSIPUG00000008212	pcbp4	100	83.043	Ictalurus_punctatus
ENSHBUG00000005329	-	95	56.522	ENSSTOG00000002573	PCBP4	97	57.403	Ictidomys_tridecemlineatus
ENSHBUG00000005329	-	95	58.352	ENSJJAG00000016235	Pcbp4	97	59.226	Jaculus_jaculus
ENSHBUG00000005329	-	100	94.748	ENSKMAG00000017554	-	100	94.748	Kryptolebias_marmoratus
ENSHBUG00000005329	-	98	75.641	ENSKMAG00000014252	pcbp4	96	76.546	Kryptolebias_marmoratus
ENSHBUG00000005329	-	100	95.405	ENSLBEG00000011345	-	100	95.405	Labrus_bergylta
ENSHBUG00000005329	-	100	66.087	ENSLACG00000015899	PCBP4	98	73.276	Latimeria_chalumnae
ENSHBUG00000005329	-	100	80.392	ENSLOCG00000013402	pcbp4	100	80.870	Lepisosteus_oculatus
ENSHBUG00000005329	-	94	55.693	ENSLAFG00000010732	PCBP4	100	56.511	Loxodonta_africana
ENSHBUG00000005329	-	96	57.848	ENSMFAG00000001431	PCBP4	99	58.705	Macaca_fascicularis
ENSHBUG00000005329	-	96	57.848	ENSMMUG00000022205	PCBP4	99	58.705	Macaca_mulatta
ENSHBUG00000005329	-	96	57.848	ENSMNEG00000028553	PCBP4	99	58.705	Macaca_nemestrina
ENSHBUG00000005329	-	96	57.848	ENSMLEG00000027083	PCBP4	99	58.705	Mandrillus_leucophaeus
ENSHBUG00000005329	-	98	73.795	ENSMAMG00000010163	pcbp4	100	72.709	Mastacembelus_armatus
ENSHBUG00000005329	-	100	96.718	ENSMAMG00000011364	-	100	96.718	Mastacembelus_armatus
ENSHBUG00000005329	-	100	99.781	ENSMZEG00005023631	-	100	99.781	Maylandia_zebra
ENSHBUG00000005329	-	98	74.066	ENSMZEG00005008852	pcbp4	100	72.817	Maylandia_zebra
ENSHBUG00000005329	-	53	73.656	ENSMGAG00000005091	-	85	73.656	Meleagris_gallopavo
ENSHBUG00000005329	-	68	53.023	ENSMGAG00000003895	-	99	53.023	Meleagris_gallopavo
ENSHBUG00000005329	-	95	58.352	ENSMAUG00000021064	Pcbp4	97	59.226	Mesocricetus_auratus
ENSHBUG00000005329	-	95	58.352	ENSMICG00000002686	PCBP4	97	59.226	Microcebus_murinus
ENSHBUG00000005329	-	95	58.810	ENSMOCG00000013557	Pcbp4	97	59.681	Microtus_ochrogaster
ENSHBUG00000005329	-	100	90.476	ENSMMOG00000020533	-	100	90.476	Mola_mola
ENSHBUG00000005329	-	70	62.179	ENSMMOG00000017756	pcbp4	97	60.736	Mola_mola
ENSHBUG00000005329	-	95	58.352	ENSMODG00000011790	PCBP4	82	58.998	Monodelphis_domestica
ENSHBUG00000005329	-	89	78.502	ENSMALG00000020318	pcbp4	91	77.419	Monopterus_albus
ENSHBUG00000005329	-	98	94.879	ENSMALG00000022117	-	100	94.879	Monopterus_albus
ENSHBUG00000005329	-	95	58.352	MGP_CAROLIEiJ_G0032623	Pcbp4	93	75.543	Mus_caroli
ENSHBUG00000005329	-	95	58.352	ENSMUSG00000023495	Pcbp4	91	80.741	Mus_musculus
ENSHBUG00000005329	-	95	58.352	MGP_PahariEiJ_G0015491	Pcbp4	93	75.543	Mus_pahari
ENSHBUG00000005329	-	95	58.352	MGP_SPRETEiJ_G0033768	-	93	75.543	Mus_spretus
ENSHBUG00000005329	-	95	58.124	ENSMPUG00000011766	PCBP4	97	58.998	Mustela_putorius_furo
ENSHBUG00000005329	-	95	58.352	ENSNGAG00000013148	Pcbp4	97	59.226	Nannospalax_galili
ENSHBUG00000005329	-	100	98.135	ENSNBRG00000015885	-	100	98.135	Neolamprologus_brichardi
ENSHBUG00000005329	-	93	65.796	ENSNBRG00000007475	pcbp4	98	63.170	Neolamprologus_brichardi
ENSHBUG00000005329	-	96	57.848	ENSNLEG00000007064	PCBP4	99	58.705	Nomascus_leucogenys
ENSHBUG00000005329	-	94	48.438	ENSMEUG00000006917	PCBP4	95	48.884	Notamacropus_eugenii
ENSHBUG00000005329	-	94	51.131	ENSOPRG00000008763	PCBP4	98	51.562	Ochotona_princeps
ENSHBUG00000005329	-	95	58.124	ENSODEG00000018230	PCBP4	97	58.998	Octodon_degus
ENSHBUG00000005329	-	95	57.798	ENSOANG00000014110	PCBP4	94	58.219	Ornithorhynchus_anatinus
ENSHBUG00000005329	-	95	58.581	ENSOCUG00000025336	PCBP4	97	59.226	Oryctolagus_cuniculus
ENSHBUG00000005329	-	100	90.519	ENSORLG00000009899	-	100	91.723	Oryzias_latipes
ENSHBUG00000005329	-	98	72.211	ENSORLG00000003061	pcbp4	96	73.053	Oryzias_latipes
ENSHBUG00000005329	-	100	95.186	ENSORLG00020001183	-	100	95.186	Oryzias_latipes_hni
ENSHBUG00000005329	-	100	95.624	ENSORLG00015017819	-	100	95.624	Oryzias_latipes_hsok
ENSHBUG00000005329	-	99	70.722	ENSORLG00015019262	pcbp4	97	71.340	Oryzias_latipes_hsok
ENSHBUG00000005329	-	100	95.842	ENSOMEG00000011545	-	100	95.842	Oryzias_melastigma
ENSHBUG00000005329	-	98	69.936	ENSOMEG00000003516	-	97	70.378	Oryzias_melastigma
ENSHBUG00000005329	-	95	58.124	ENSOGAG00000032384	PCBP4	97	58.998	Otolemur_garnettii
ENSHBUG00000005329	-	94	56.416	ENSOARG00000006603	PCBP4	100	57.349	Ovis_aries
ENSHBUG00000005329	-	96	57.399	ENSPPAG00000038764	PCBP4	99	58.259	Pan_paniscus
ENSHBUG00000005329	-	95	58.124	ENSPPRG00000006165	PCBP4	97	58.998	Panthera_pardus
ENSHBUG00000005329	-	95	58.124	ENSPTIG00000005401	PCBP4	93	58.998	Panthera_tigris_altaica
ENSHBUG00000005329	-	96	57.623	ENSPTRG00000014983	PCBP4	99	58.482	Pan_troglodytes
ENSHBUG00000005329	-	96	57.848	ENSPANG00000026222	PCBP4	99	58.705	Papio_anubis
ENSHBUG00000005329	-	100	83.188	ENSPKIG00000010244	pcbp4	100	83.188	Paramormyrops_kingsleyae
ENSHBUG00000005329	-	100	74.891	ENSPKIG00000005487	-	100	74.891	Paramormyrops_kingsleyae
ENSHBUG00000005329	-	79	58.808	ENSPSIG00000011286	PCBP4	96	58.410	Pelodiscus_sinensis
ENSHBUG00000005329	-	100	84.475	ENSPMGG00000022732	-	100	84.932	Periophthalmus_magnuspinnatus
ENSHBUG00000005329	-	94	74.286	ENSPMGG00000000063	pcbp4	99	74.286	Periophthalmus_magnuspinnatus
ENSHBUG00000005329	-	95	58.352	ENSPEMG00000009276	Pcbp4	97	59.226	Peromyscus_maniculatus_bairdii
ENSHBUG00000005329	-	95	59.039	ENSPCIG00000018151	PCBP4	93	59.226	Phascolarctos_cinereus
ENSHBUG00000005329	-	95	71.205	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSHBUG00000005329	-	100	94.311	ENSPFOG00000002989	-	100	94.311	Poecilia_formosa
ENSHBUG00000005329	-	93	69.713	ENSPLAG00000023316	pcbp4	89	72.135	Poecilia_latipinna
ENSHBUG00000005329	-	93	64.608	ENSPLAG00000011438	-	98	64.169	Poecilia_latipinna
ENSHBUG00000005329	-	64	61.433	ENSPMEG00000012990	pcbp4	100	64.214	Poecilia_mexicana
ENSHBUG00000005329	-	100	88.811	ENSPREG00000017370	-	100	88.811	Poecilia_reticulata
ENSHBUG00000005329	-	69	57.679	ENSPREG00000021498	-	81	57.679	Poecilia_reticulata
ENSHBUG00000005329	-	96	57.848	ENSPPYG00000013822	PCBP4	99	58.705	Pongo_abelii
ENSHBUG00000005329	-	94	51.945	ENSPCAG00000009515	PCBP4	97	52.511	Procavia_capensis
ENSHBUG00000005329	-	95	58.352	ENSPCOG00000027535	PCBP4	97	59.226	Propithecus_coquereli
ENSHBUG00000005329	-	94	49.231	ENSPVAG00000012474	PCBP4	98	49.241	Pteropus_vampyrus
ENSHBUG00000005329	-	100	98.601	ENSPNYG00000003098	-	100	98.601	Pundamilia_nyererei
ENSHBUG00000005329	-	94	75.118	ENSPNYG00000019234	pcbp4	100	73.198	Pundamilia_nyererei
ENSHBUG00000005329	-	100	83.226	ENSPNAG00000025434	pcbp4	100	83.441	Pygocentrus_nattereri
ENSHBUG00000005329	-	95	58.352	ENSRNOG00000012406	Pcbp4	97	59.226	Rattus_norvegicus
ENSHBUG00000005329	-	96	57.848	ENSRBIG00000043793	PCBP4	99	58.705	Rhinopithecus_bieti
ENSHBUG00000005329	-	96	57.848	ENSRROG00000034589	PCBP4	99	58.705	Rhinopithecus_roxellana
ENSHBUG00000005329	-	96	57.848	ENSSBOG00000027029	PCBP4	99	58.705	Saimiri_boliviensis_boliviensis
ENSHBUG00000005329	-	69	59.004	ENSSHAG00000007362	PCBP4	100	59.004	Sarcophilus_harrisii
ENSHBUG00000005329	-	100	75.000	ENSSFOG00015012075	PCBP4	100	74.783	Scleropages_formosus
ENSHBUG00000005329	-	75	83.766	ENSSFOG00015008221	pcbp4	60	83.766	Scleropages_formosus
ENSHBUG00000005329	-	100	93.450	ENSSMAG00000009392	-	99	93.450	Scophthalmus_maximus
ENSHBUG00000005329	-	98	74.316	ENSSMAG00000005827	pcbp4	95	74.948	Scophthalmus_maximus
ENSHBUG00000005329	-	94	76.627	ENSSDUG00000017719	pcbp4	97	77.644	Seriola_dumerili
ENSHBUG00000005329	-	100	95.804	ENSSDUG00000015540	-	100	95.804	Seriola_dumerili
ENSHBUG00000005329	-	58	84.177	ENSSLDG00000024847	-	77	84.177	Seriola_lalandi_dorsalis
ENSHBUG00000005329	-	100	95.804	ENSSLDG00000007851	-	100	95.804	Seriola_lalandi_dorsalis
ENSHBUG00000005329	-	95	56.322	ENSSPUG00000000194	PCBP4	97	56.552	Sphenodon_punctatus
ENSHBUG00000005329	-	94	63.990	ENSSPAG00000019058	-	92	64.767	Stegastes_partitus
ENSHBUG00000005329	-	100	96.718	ENSSPAG00000003033	-	100	96.718	Stegastes_partitus
ENSHBUG00000005329	-	95	58.124	ENSSSCG00000028446	PCBP4	97	58.998	Sus_scrofa
ENSHBUG00000005329	-	70	58.204	ENSTGUG00000006393	PCBP4	96	58.204	Taeniopygia_guttata
ENSHBUG00000005329	-	100	91.375	ENSTRUG00000007426	-	100	91.375	Takifugu_rubripes
ENSHBUG00000005329	-	98	86.130	ENSTNIG00000017887	-	100	86.130	Tetraodon_nigroviridis
ENSHBUG00000005329	-	85	39.163	ENSTBEG00000015770	PCBP4	100	39.951	Tupaia_belangeri
ENSHBUG00000005329	-	73	53.439	ENSTTRG00000001443	PCBP4	83	54.450	Tursiops_truncatus
ENSHBUG00000005329	-	94	54.155	ENSUAMG00000020871	PCBP4	100	55.200	Ursus_americanus
ENSHBUG00000005329	-	86	59.453	ENSUMAG00000021609	PCBP4	93	58.753	Ursus_maritimus
ENSHBUG00000005329	-	95	58.124	ENSVVUG00000026857	PCBP4	97	58.998	Vulpes_vulpes
ENSHBUG00000005329	-	94	84.097	ENSXCOG00000000111	-	100	84.097	Xiphophorus_couchianus
ENSHBUG00000005329	-	90	67.488	ENSXMAG00000022188	-	90	69.779	Xiphophorus_maculatus
ENSHBUG00000005329	-	78	82.778	ENSXMAG00000015709	pcbp4	75	82.778	Xiphophorus_maculatus
ENSHBUG00000005329	-	100	94.311	ENSXMAG00000024530	-	100	94.311	Xiphophorus_maculatus